[Collab-qa-commits] r2255 - in packages-metadata: g l m

Charles Plessy plessy at alioth.debian.org
Fri May 4 03:00:31 UTC 2012


Author: plessy
Date: 2012-05-04 03:00:30 +0000 (Fri, 04 May 2012)
New Revision: 2255

Added:
   packages-metadata/g/grinder.upstream
   packages-metadata/l/loki.upstream
   packages-metadata/m/mopac7.upstream
Modified:
   packages-metadata/g/gff2ps.copyright
   packages-metadata/g/grinder.copyright
Log:
Daily automatic umegaya push

Modified: packages-metadata/g/gff2ps.copyright
===================================================================
--- packages-metadata/g/gff2ps.copyright	2012-05-03 11:49:35 UTC (rev 2254)
+++ packages-metadata/g/gff2ps.copyright	2012-05-04 03:00:30 UTC (rev 2255)
@@ -1,28 +1,34 @@
-This package was debianized by Nelson A. de Oliveira <naoliv at gmail.com> on
-Tue, 22 Mar 2005 12:22:50 -0300.
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: GFF2Ps
+Upstream-Contact: Josep Francesc ABRIL FERRANDO <jabril at imim.es>
+Source: http://genome.imim.es/software/gfftools/GFF2PS.html
 
-It was downloaded from http://genome.imim.es/software/gfftools/GFF2PS.html
+Files: *
+Copyright: 1999-2003 Josep Francesc ABRIL FERRANDO  
+                     Roderic GUIGO SERRA       
+License: GPL-2+
 
-gff2ps
+Files: debian/*
+Copyright: 2005-2008 Nelson A. de Oliveira <naoliv at gmail.com>
+           2012 Andreas Tille <tille at debian.org>
+License: GPL-2+
 
-     Converting GFF files to PostScript.
-
-   Copyright (C) 1999-2003 - Josep Francesc ABRIL FERRANDO  
-                                    Roderic GUIGO SERRA       
-
+License: GPL-2+
  This program is free software; you can redistribute it and/or modify
  it under the terms of the GNU General Public License as published by
  the Free Software Foundation; either version 2 of the License, or
  (at your option) any later version.
-
+ .
  This program is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  GNU General Public License for more details.
-
+ .
  You should have received a copy of the GNU General Public License
  along with this program; if not, write to the Free Software
  Foundation, Inc., 51 Franklin St, Fifth Floor, Boston,
  MA 02110-1301, USA.
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License can be found in `/usr/share/common-licenses/GPL'.
 
-On Debian systems, the GPL license can be found at /usr/share/common-licenses/

Modified: packages-metadata/g/grinder.copyright
===================================================================
--- packages-metadata/g/grinder.copyright	2012-05-03 11:49:35 UTC (rev 2254)
+++ packages-metadata/g/grinder.copyright	2012-05-04 03:00:30 UTC (rev 2255)
@@ -1,4 +1,4 @@
-Format: http://dep.debian.net/deps/dep5/
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: Grinder
 Upstream-Contact: Florent Angly <florent.angly at gmail.com>
 Source: http://sourceforge.net/projects/biogrinder/files/

Added: packages-metadata/g/grinder.upstream
===================================================================
--- packages-metadata/g/grinder.upstream	                        (rev 0)
+++ packages-metadata/g/grinder.upstream	2012-05-04 03:00:30 UTC (rev 2255)
@@ -0,0 +1,10 @@
+Reference:
+  Author: Florent E. Angly and Dana Willner and Forest Rohwer and Philip Hugenholtz and  Gene W. Tyson
+  Title: "Grinder: a versatile amplicon and shotgun sequence simulator"
+  Journal: Nucleic Acids Research
+  Year: 2012
+  Volume: Epub ahead of print
+  DOI: 10.1093/nar/gks251
+  PMID: 22434876
+  URL: http://nar.oxfordjournals.org/content/early/2012/03/19/nar.gks251.abstract
+  eprint: http://nar.oxfordjournals.org/content/early/2012/03/19/nar.gks251.full.pdf+html

Added: packages-metadata/l/loki.upstream
===================================================================
--- packages-metadata/l/loki.upstream	                        (rev 0)
+++ packages-metadata/l/loki.upstream	2012-05-04 03:00:30 UTC (rev 2255)
@@ -0,0 +1,23 @@
+Reference:
+ - Author: Simon C. Heath
+   Title: Markov chain Monte Carlo segregation and linkage analysis for oligogenic models
+   Journal: American Journal of Human Genetics
+   Year: 1997
+   Volume: 61
+   Number: 3
+   Pages: 748-60
+   DOI: 10.1086/515506
+   PMID: 9326339
+   URL: http://www.cell.com/AJHG/abstract/S0002-9297%2807%2964337-7
+   eprint: http://download.cell.com/AJHG/pdf/PIIS0002929707643377.pdf
+ - Author: E Warwick Daw and Simon C Heath and Yue Lu
+   Title: Single-nucleotide polymorphism versus microsatellite markers in a combined linkage and segregation analysis of a quantitative trait
+   Journal: BMC Genetics
+   Year: 2005
+   Volume: 6
+   Number: Suppl 1
+   Pages: S32
+   DOI: 10.1186/1471-2156-6-S1-S32
+   PMID: 16451642
+   URL: http://www.biomedcentral.com/1471-2156/6/S1/S32
+   eprint: http://www.biomedcentral.com/content/pdf/1471-2156-6-S1-S32.pdf

Added: packages-metadata/m/mopac7.upstream
===================================================================
--- packages-metadata/m/mopac7.upstream	                        (rev 0)
+++ packages-metadata/m/mopac7.upstream	2012-05-04 03:00:30 UTC (rev 2255)
@@ -0,0 +1,11 @@
+Name: GaussSum
+Reference:
+ - Author: James J.P. Stewart
+   Title: "MOPAC: A semiempirical molecular orbital program"
+   Journal: J. Comput.-Aided Mol. Design
+   Year: 1990
+   Volume: 4
+   Number: 1
+   Pages: 1-103
+   URL: http://www.springerlink.com/content/p11150521612jm27/
+   DOI: 10.1007/BF00128336




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