[med-svn] r65 - in trunk/packages/treeviewx/trunk/debian: . patches

Charles Plessy charles-guest at costa.debian.org
Wed Jun 28 13:05:58 UTC 2006


Author: charles-guest
Date: 2006-06-28 13:05:57 +0000 (Wed, 28 Jun 2006)
New Revision: 65

Added:
   trunk/packages/treeviewx/trunk/debian/patches/60_LGPLtoGPL.dpatch
Modified:
   trunk/packages/treeviewx/trunk/debian/changelog
   trunk/packages/treeviewx/trunk/debian/control
   trunk/packages/treeviewx/trunk/debian/copyright
   trunk/packages/treeviewx/trunk/debian/patches/00list
Log:
solving copyright issues

Modified: trunk/packages/treeviewx/trunk/debian/changelog
===================================================================
--- trunk/packages/treeviewx/trunk/debian/changelog	2006-06-18 02:05:55 UTC (rev 64)
+++ trunk/packages/treeviewx/trunk/debian/changelog	2006-06-28 13:05:57 UTC (rev 65)
@@ -1,9 +1,3 @@
-treeviewx (0.5.1-2) UNRELEASED; urgency=low
-
-  * NOT RELEASED YET
-
- -- Charles Plessy <charles-debian-nospam at plessy.org>  Sat, 17 Jun 2006 11:58:25 +0900
-
 treeviewx (0.5.1-1) unstable; urgency=low
 
   * Initial release Closes: #352506

Modified: trunk/packages/treeviewx/trunk/debian/control
===================================================================
--- trunk/packages/treeviewx/trunk/debian/control	2006-06-18 02:05:55 UTC (rev 64)
+++ trunk/packages/treeviewx/trunk/debian/control	2006-06-28 13:05:57 UTC (rev 65)
@@ -17,6 +17,7 @@
  format.
  .
  The program was written by Rod Page r.page at bio.gla.ac.uk using the wxWidgets
- C++ library.
+ C++ library. It was published in Computer Applications in the Biosciences. 1996
+ 12: 357-358.
  .
   Homepage: http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/

Modified: trunk/packages/treeviewx/trunk/debian/copyright
===================================================================
--- trunk/packages/treeviewx/trunk/debian/copyright	2006-06-18 02:05:55 UTC (rev 64)
+++ trunk/packages/treeviewx/trunk/debian/copyright	2006-06-28 13:05:57 UTC (rev 65)
@@ -1,22 +1,20 @@
 This package was debianized by Charles Plessy
 <charles-debian-nospam at plessy.org> on Sat, 11 Feb 2006.  The packaging
 work is in the public domain unless stated otherwise. The manpage is
-licenced under the GPL.
+licenced under the GNU General Public License.
 
 TreeView X was downloaded from http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download.html
 
-Copyright (C) 1999 Paul O. Lewis
-Copyright (c) 2000 by Paul O. Lewis
 Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
 
 License:
 
-   This package is free software; you can redistribute it and/or modify
+   TreeView X is free software; you can redistribute it and/or modify
    it under the terms of the GNU General Public License as published by
    the Free Software Foundation; either version 2 of the License, or
    (at your option) any later version.
 
-   This package is distributed in the hope that it will be useful,
+   TreeView X is distributed in the hope that it will be useful,
    but WITHOUT ANY WARRANTY; without even the implied warranty of
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
    GNU General Public License for more details.
@@ -25,6 +23,9 @@
    along with this package; if not, write to the Free Software
    Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
 
+TreeView X uses the Nexus Class Library (Copyright (C) 1999 Paul O.
+Lewis) and the TreeLib (Copyright (C) 2001 Roderic D. M. Page). Both
+are released under the GNU General Public License.
+
 On Debian systems, the complete text of the GNU General
 Public License can be found in `/usr/share/common-licenses/GPL'.
-

Modified: trunk/packages/treeviewx/trunk/debian/patches/00list
===================================================================
--- trunk/packages/treeviewx/trunk/debian/patches/00list	2006-06-18 02:05:55 UTC (rev 64)
+++ trunk/packages/treeviewx/trunk/debian/patches/00list	2006-06-28 13:05:57 UTC (rev 65)
@@ -1,2 +1,3 @@
 50_wxT_tv.cpp.dpatch
 51_wxT_tview.cpp.dpatch
+60_LGPLtoGPL.dpatch

Added: trunk/packages/treeviewx/trunk/debian/patches/60_LGPLtoGPL.dpatch
===================================================================
--- trunk/packages/treeviewx/trunk/debian/patches/60_LGPLtoGPL.dpatch	2006-06-18 02:05:55 UTC (rev 64)
+++ trunk/packages/treeviewx/trunk/debian/patches/60_LGPLtoGPL.dpatch	2006-06-28 13:05:57 UTC (rev 65)
@@ -0,0 +1,1075 @@
+#! /bin/sh /usr/share/dpatch/dpatch-run
+## 60_LGPLtoGPL.dpatch by Charles Plessy <charles-debian-nospam at plessy.org>
+## This patch is hereby released in the public domain.
+##
+## All lines beginning with `## DP:' are a description of the patch.
+## DP: Converts LGPL statements to GPL, updates FSF's adress.
+
+ at DPATCH@
+
+diff -ruN tv.orig/COPYING tv/COPYING
+--- tv.orig/COPYING	2006-06-12 21:11:38.000000000 +0900
++++ tv/COPYING	2006-06-28 20:39:19.000000000 +0900
+@@ -2,7 +2,7 @@
+ 		       Version 2, June 1991
+ 
+  Copyright (C) 1989, 1991 Free Software Foundation, Inc.
+-     59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
++	51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
+  Everyone is permitted to copy and distribute verbatim copies
+  of this license document, but changing it is not allowed.
+ 
+@@ -305,7 +305,7 @@
+ 
+     You should have received a copy of the GNU General Public License
+     along with this program; if not, write to the Free Software
+-    Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
++    Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+ 
+ 
+ Also add information on how to contact you by electronic and paper mail.
+diff -ruN tv.orig/LGPLtoGPL.diff tv/LGPLtoGPL.diff
+--- tv.orig/LGPLtoGPL.diff	1970-01-01 09:00:00.000000000 +0900
++++ tv/LGPLtoGPL.diff	2006-06-28 20:48:52.000000000 +0900
+@@ -0,0 +1,21 @@
++diff -ruN tv.orig/COPYING tv/COPYING
++--- tv.orig/COPYING	2006-06-12 21:11:38.000000000 +0900
+++++ tv/COPYING	2006-06-28 20:39:19.000000000 +0900
++@@ -2,7 +2,7 @@
++ 		       Version 2, June 1991
++ 
++  Copyright (C) 1989, 1991 Free Software Foundation, Inc.
++-     59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
+++	51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
++  Everyone is permitted to copy and distribute verbatim copies
++  of this license document, but changing it is not allowed.
++ 
++@@ -305,7 +305,7 @@
++ 
++     You should have received a copy of the GNU General Public License
++     along with this program; if not, write to the Free Software
++-    Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
+++    Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
++ 
++ 
++ Also add information on how to contact you by electronic and paper mail.
+diff -ruN tv.orig/tdoc.cpp tv/tdoc.cpp
+--- tv.orig/tdoc.cpp	2006-06-12 21:11:38.000000000 +0900
++++ tv/tdoc.cpp	2006-06-28 20:30:56.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A phylogenetic tree viewer.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: tdoc.cpp,v 1.6 2001/07/25 10:37:06 rdmp1c Exp $
+diff -ruN tv.orig/tdoc.h tv/tdoc.h
+--- tv.orig/tdoc.h	2006-06-28 20:26:50.000000000 +0900
++++ tv/tdoc.h	2006-06-28 20:24:07.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A phylogenetic tree viewer.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: tdoc.h,v 1.4 2001/07/24 10:49:48 rdmp1c Exp $
+diff -ruN tv.orig/tproject.h tv/tproject.h
+--- tv.orig/tproject.h	2006-06-12 21:11:38.000000000 +0900
++++ tv/tproject.h	2006-06-28 20:30:40.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A phylogenetic tree viewer.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: tproject.h,v 1.9 2005/08/31 08:55:25 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/lcaquery.h tv/TreeLib/lcaquery.h
+--- tv.orig/TreeLib/lcaquery.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/lcaquery.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+  // $Id: lcaquery.h,v 1.1 2002/03/14 14:11:42 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/mast.cpp tv/TreeLib/mast.cpp
+--- tv.orig/TreeLib/mast.cpp	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/mast.cpp	2006-06-28 20:31:07.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+  // $Id: mast.cpp,v 1.5 2005/05/24 22:55:16 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/mast.h tv/TreeLib/mast.h
+--- tv.orig/TreeLib/mast.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/mast.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+  // $Id: mast.h,v 1.1 2002/05/16 16:07:32 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/nodeiterator.h tv/TreeLib/nodeiterator.h
+--- tv.orig/TreeLib/nodeiterator.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/nodeiterator.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+  // $Id: nodeiterator.h,v 1.5 2005/03/29 16:48:52 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/Parse.cpp tv/TreeLib/Parse.cpp
+--- tv.orig/TreeLib/Parse.cpp	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/Parse.cpp	2006-06-28 20:31:08.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+  // $Id: Parse.cpp,v 1.9 2002/02/23 12:22:32 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/Parse.h tv/TreeLib/Parse.h
+--- tv.orig/TreeLib/Parse.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/Parse.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: Parse.h,v 1.7 2004/03/04 23:22:42 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/profile.h tv/TreeLib/profile.h
+--- tv.orig/TreeLib/profile.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/profile.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: profile.h,v 1.30 2005/08/31 08:55:59 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/quartet.cpp tv/TreeLib/quartet.cpp
+--- tv.orig/TreeLib/quartet.cpp	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/quartet.cpp	2006-06-28 20:31:08.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+  // $Id: quartet.cpp,v 1.2 2002/03/14 16:37:13 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/quartet.h tv/TreeLib/quartet.h
+--- tv.orig/TreeLib/quartet.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/quartet.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+  // $Id: quartet.h,v 1.1 2002/03/14 14:11:42 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/tokeniser.cpp tv/TreeLib/tokeniser.cpp
+--- tv.orig/TreeLib/tokeniser.cpp	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/tokeniser.cpp	2006-06-28 20:31:08.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+ // $Id: tokeniser.cpp,v 1.14 2005/09/05 07:44:48 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/tokeniser.h tv/TreeLib/tokeniser.h
+--- tv.orig/TreeLib/tokeniser.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/tokeniser.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: tokeniser.h,v 1.14 2003/09/17 13:05:57 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/treedrawer.cpp tv/TreeLib/treedrawer.cpp
+--- tv.orig/TreeLib/treedrawer.cpp	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/treedrawer.cpp	2006-06-28 20:31:08.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+ // $Id: treedrawer.cpp,v 1.18 2005/09/06 13:00:14 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/treedrawer.h tv/TreeLib/treedrawer.h
+--- tv.orig/TreeLib/treedrawer.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/treedrawer.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+ // $Id: treedrawer.h,v 1.8 2004/03/16 07:07:40 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/TreeLib.cpp tv/TreeLib/TreeLib.cpp
+--- tv.orig/TreeLib/TreeLib.cpp	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/TreeLib.cpp	2006-06-28 20:31:08.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+ // $Id: TreeLib.cpp,v 1.26 2004/05/13 12:22:11 jcotton Exp $
+diff -ruN tv.orig/TreeLib/TreeLib.h tv/TreeLib/TreeLib.h
+--- tv.orig/TreeLib/TreeLib.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/TreeLib.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+ // $Id: TreeLib.h,v 1.26 2004/05/13 12:22:11 jcotton Exp $
+diff -ruN tv.orig/TreeLib/treeorder.cpp tv/TreeLib/treeorder.cpp
+--- tv.orig/TreeLib/treeorder.cpp	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/treeorder.cpp	2006-06-28 20:31:08.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+ // $Id: treeorder.cpp,v 1.2 2005/02/23 14:19:00 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/treeorder.h tv/TreeLib/treeorder.h
+--- tv.orig/TreeLib/treeorder.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/treeorder.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+ 
+  // $Id: treeorder.h,v 1.4 2005/02/23 14:19:00 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/treereader.cpp tv/TreeLib/treereader.cpp
+--- tv.orig/TreeLib/treereader.cpp	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/treereader.cpp	2006-06-28 20:31:08.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: treereader.cpp,v 1.5 2003/09/10 12:58:16 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/treereader.h tv/TreeLib/treereader.h
+--- tv.orig/TreeLib/treereader.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/treereader.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+ // $Id: treereader.h,v 1.4 2003/10/21 10:58:45 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/treewriter.cpp tv/TreeLib/treewriter.cpp
+--- tv.orig/TreeLib/treewriter.cpp	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/treewriter.cpp	2006-06-28 20:31:08.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: treewriter.cpp,v 1.4 2005/02/23 14:32:44 rdmp1c Exp $
+diff -ruN tv.orig/TreeLib/treewriter.h tv/TreeLib/treewriter.h
+--- tv.orig/TreeLib/treewriter.h	2006-06-12 21:11:34.000000000 +0900
++++ tv/TreeLib/treewriter.h	2006-06-28 20:31:23.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A library for manipulating phylogenetic trees.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+ // $Id: treewriter.h,v 1.5 2005/02/23 14:36:08 rdmp1c Exp $
+diff -ruN tv.orig/treeorder_dialog.cpp tv/treeorder_dialog.cpp
+--- tv.orig/treeorder_dialog.cpp	2006-06-12 21:11:38.000000000 +0900
++++ tv/treeorder_dialog.cpp	2006-06-28 20:30:56.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A phylogenetic tree viewer.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+ // $Id: treeorder_dialog.cpp,v 1.2 2005/02/21 19:41:24 rdmp1c Exp $
+diff -ruN tv.orig/treeorder_dialog.h tv/treeorder_dialog.h
+--- tv.orig/treeorder_dialog.h	2006-06-12 21:11:38.000000000 +0900
++++ tv/treeorder_dialog.h	2006-06-28 20:30:40.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A phylogenetic tree viewer.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+ // $Id: treeorder_dialog.h,v 1.2 2003/10/22 16:46:26 rdmp1c Exp $
+diff -ruN tv.orig/tv.cpp tv/tv.cpp
+--- tv.orig/tv.cpp	2006-06-12 21:11:38.000000000 +0900
++++ tv/tv.cpp	2006-06-28 20:30:56.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A phylogenetic tree viewer.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: tv.cpp,v 1.41 2005/03/23 13:30:32 rdmp1c Exp $
+diff -ruN tv.orig/tv.h tv/tv.h
+--- tv.orig/tv.h	2006-06-12 21:11:38.000000000 +0900
++++ tv/tv.h	2006-06-28 20:29:26.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A phylogenetic tree viewer.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: tv.h,v 1.4 2004/08/05 15:55:26 rdmp1c Exp $
+diff -ruN tv.orig/tview.cpp tv/tview.cpp
+--- tv.orig/tview.cpp	2006-06-12 21:11:38.000000000 +0900
++++ tv/tview.cpp	2006-06-28 20:30:56.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A phylogenetic tree viewer.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: tview.cpp,v 1.37 2005/08/31 08:55:13 rdmp1c Exp $
+diff -ruN tv.orig/tview.h tv/tview.h
+--- tv.orig/tview.h	2006-06-12 21:11:38.000000000 +0900
++++ tv/tview.h	2006-06-28 20:30:43.000000000 +0900
+@@ -3,20 +3,19 @@
+  * A phylogenetic tree viewer.
+  * Copyright (C) 2001 Roderic D. M. Page <r.page at bio.gla.ac.uk>
+  *
+- * This library is free software; you can redistribute it and/or
+- * modify it under the terms of the GNU Library General Public
+- * License as published by the Free Software Foundation; either
+- * version 2 of the License, or (at your option) any later version.
++ * This program is free software; you can redistribute it and/or modify
++ * it under the terms of the GNU General Public License as published by
++ * the Free Software Foundation; either version 2 of the License, or
++ * (at your option) any later version.
+  *
+- * This library is distributed in the hope that it will be useful,
++ * This program is distributed in the hope that it will be useful,
+  * but WITHOUT ANY WARRANTY; without even the implied warranty of
+- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+- * Library General Public License for more details.
++ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
++ * GNU General Public License for more details.
+  *
+- * You should have received a copy of the GNU Library General Public
+- * License along with this library; if not, write to the Free
+- * Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
+- * MA 02111-1307, USA.
++ * You should have received a copy of the GNU General Public License
++ * along with this program; if not, write to the Free Software
++ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+  */
+  
+  // $Id: tview.h,v 1.21 2005/08/31 08:55:01 rdmp1c Exp $


Property changes on: trunk/packages/treeviewx/trunk/debian/patches/60_LGPLtoGPL.dpatch
___________________________________________________________________
Name: svn:executable
   + *




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