[med-svn] r415 - in trunk/packages/rnahybrid/trunk: . debian
charles-guest at alioth.debian.org
charles-guest at alioth.debian.org
Sun Sep 2 01:59:54 UTC 2007
Author: charles-guest
Date: 2007-09-02 01:59:54 +0000 (Sun, 02 Sep 2007)
New Revision: 415
Removed:
trunk/packages/rnahybrid/trunk/AUTHORS
trunk/packages/rnahybrid/trunk/COPYING
trunk/packages/rnahybrid/trunk/ChangeLog
trunk/packages/rnahybrid/trunk/INSTALL
trunk/packages/rnahybrid/trunk/Makefile.am
trunk/packages/rnahybrid/trunk/Makefile.in
trunk/packages/rnahybrid/trunk/NEWS
trunk/packages/rnahybrid/trunk/README
trunk/packages/rnahybrid/trunk/aclocal.m4
trunk/packages/rnahybrid/trunk/config.h.in
trunk/packages/rnahybrid/trunk/configure
trunk/packages/rnahybrid/trunk/configure.in
trunk/packages/rnahybrid/trunk/depcomp
trunk/packages/rnahybrid/trunk/examples/
trunk/packages/rnahybrid/trunk/install-sh
trunk/packages/rnahybrid/trunk/man/
trunk/packages/rnahybrid/trunk/missing
trunk/packages/rnahybrid/trunk/mkinstalldirs
trunk/packages/rnahybrid/trunk/src/
Modified:
trunk/packages/rnahybrid/trunk/debian/
trunk/packages/rnahybrid/trunk/debian/changelog
trunk/packages/rnahybrid/trunk/debian/copyright
Log:
Tidying the repository, and fixing copyright file in order to resubmit to NEW
Deleted: trunk/packages/rnahybrid/trunk/AUTHORS
===================================================================
--- trunk/packages/rnahybrid/trunk/AUTHORS 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/AUTHORS 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,3 +0,0 @@
-Marc Rehmsmeier (marc at techfak.uni-bielefeld.de)
-Peter Steffen (psteffen at techfak.uni-bielefeld.de)
-Matthias Hoechsmann (mhoechsm at techfak.uni-bielefeld.de)
Deleted: trunk/packages/rnahybrid/trunk/COPYING
===================================================================
--- trunk/packages/rnahybrid/trunk/COPYING 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/COPYING 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,340 +0,0 @@
- GNU GENERAL PUBLIC LICENSE
- Version 2, June 1991
-
- Copyright (C) 1989, 1991 Free Software Foundation, Inc.
- 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
- Everyone is permitted to copy and distribute verbatim copies
- of this license document, but changing it is not allowed.
-
- Preamble
-
- The licenses for most software are designed to take away your
-freedom to share and change it. By contrast, the GNU General Public
-License is intended to guarantee your freedom to share and change free
-software--to make sure the software is free for all its users. This
-General Public License applies to most of the Free Software
-Foundation's software and to any other program whose authors commit to
-using it. (Some other Free Software Foundation software is covered by
-the GNU Library General Public License instead.) You can apply it to
-your programs, too.
-
- When we speak of free software, we are referring to freedom, not
-price. Our General Public Licenses are designed to make sure that you
-have the freedom to distribute copies of free software (and charge for
-this service if you wish), that you receive source code or can get it
-if you want it, that you can change the software or use pieces of it
-in new free programs; and that you know you can do these things.
-
- To protect your rights, we need to make restrictions that forbid
-anyone to deny you these rights or to ask you to surrender the rights.
-These restrictions translate to certain responsibilities for you if you
-distribute copies of the software, or if you modify it.
-
- For example, if you distribute copies of such a program, whether
-gratis or for a fee, you must give the recipients all the rights that
-you have. You must make sure that they, too, receive or can get the
-source code. And you must show them these terms so they know their
-rights.
-
- We protect your rights with two steps: (1) copyright the software, and
-(2) offer you this license which gives you legal permission to copy,
-distribute and/or modify the software.
-
- Also, for each author's protection and ours, we want to make certain
-that everyone understands that there is no warranty for this free
-software. If the software is modified by someone else and passed on, we
-want its recipients to know that what they have is not the original, so
-that any problems introduced by others will not reflect on the original
-authors' reputations.
-
- Finally, any free program is threatened constantly by software
-patents. We wish to avoid the danger that redistributors of a free
-program will individually obtain patent licenses, in effect making the
-program proprietary. To prevent this, we have made it clear that any
-patent must be licensed for everyone's free use or not licensed at all.
-
- The precise terms and conditions for copying, distribution and
-modification follow.
-
- GNU GENERAL PUBLIC LICENSE
- TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION
-
- 0. This License applies to any program or other work which contains
-a notice placed by the copyright holder saying it may be distributed
-under the terms of this General Public License. The "Program", below,
-refers to any such program or work, and a "work based on the Program"
-means either the Program or any derivative work under copyright law:
-that is to say, a work containing the Program or a portion of it,
-either verbatim or with modifications and/or translated into another
-language. (Hereinafter, translation is included without limitation in
-the term "modification".) Each licensee is addressed as "you".
-
-Activities other than copying, distribution and modification are not
-covered by this License; they are outside its scope. The act of
-running the Program is not restricted, and the output from the Program
-is covered only if its contents constitute a work based on the
-Program (independent of having been made by running the Program).
-Whether that is true depends on what the Program does.
-
- 1. You may copy and distribute verbatim copies of the Program's
-source code as you receive it, in any medium, provided that you
-conspicuously and appropriately publish on each copy an appropriate
-copyright notice and disclaimer of warranty; keep intact all the
-notices that refer to this License and to the absence of any warranty;
-and give any other recipients of the Program a copy of this License
-along with the Program.
-
-You may charge a fee for the physical act of transferring a copy, and
-you may at your option offer warranty protection in exchange for a fee.
-
- 2. You may modify your copy or copies of the Program or any portion
-of it, thus forming a work based on the Program, and copy and
-distribute such modifications or work under the terms of Section 1
-above, provided that you also meet all of these conditions:
-
- a) You must cause the modified files to carry prominent notices
- stating that you changed the files and the date of any change.
-
- b) You must cause any work that you distribute or publish, that in
- whole or in part contains or is derived from the Program or any
- part thereof, to be licensed as a whole at no charge to all third
- parties under the terms of this License.
-
- c) If the modified program normally reads commands interactively
- when run, you must cause it, when started running for such
- interactive use in the most ordinary way, to print or display an
- announcement including an appropriate copyright notice and a
- notice that there is no warranty (or else, saying that you provide
- a warranty) and that users may redistribute the program under
- these conditions, and telling the user how to view a copy of this
- License. (Exception: if the Program itself is interactive but
- does not normally print such an announcement, your work based on
- the Program is not required to print an announcement.)
-
-These requirements apply to the modified work as a whole. If
-identifiable sections of that work are not derived from the Program,
-and can be reasonably considered independent and separate works in
-themselves, then this License, and its terms, do not apply to those
-sections when you distribute them as separate works. But when you
-distribute the same sections as part of a whole which is a work based
-on the Program, the distribution of the whole must be on the terms of
-this License, whose permissions for other licensees extend to the
-entire whole, and thus to each and every part regardless of who wrote it.
-
-Thus, it is not the intent of this section to claim rights or contest
-your rights to work written entirely by you; rather, the intent is to
-exercise the right to control the distribution of derivative or
-collective works based on the Program.
-
-In addition, mere aggregation of another work not based on the Program
-with the Program (or with a work based on the Program) on a volume of
-a storage or distribution medium does not bring the other work under
-the scope of this License.
-
- 3. You may copy and distribute the Program (or a work based on it,
-under Section 2) in object code or executable form under the terms of
-Sections 1 and 2 above provided that you also do one of the following:
-
- a) Accompany it with the complete corresponding machine-readable
- source code, which must be distributed under the terms of Sections
- 1 and 2 above on a medium customarily used for software interchange; or,
-
- b) Accompany it with a written offer, valid for at least three
- years, to give any third party, for a charge no more than your
- cost of physically performing source distribution, a complete
- machine-readable copy of the corresponding source code, to be
- distributed under the terms of Sections 1 and 2 above on a medium
- customarily used for software interchange; or,
-
- c) Accompany it with the information you received as to the offer
- to distribute corresponding source code. (This alternative is
- allowed only for noncommercial distribution and only if you
- received the program in object code or executable form with such
- an offer, in accord with Subsection b above.)
-
-The source code for a work means the preferred form of the work for
-making modifications to it. For an executable work, complete source
-code means all the source code for all modules it contains, plus any
-associated interface definition files, plus the scripts used to
-control compilation and installation of the executable. However, as a
-special exception, the source code distributed need not include
-anything that is normally distributed (in either source or binary
-form) with the major components (compiler, kernel, and so on) of the
-operating system on which the executable runs, unless that component
-itself accompanies the executable.
-
-If distribution of executable or object code is made by offering
-access to copy from a designated place, then offering equivalent
-access to copy the source code from the same place counts as
-distribution of the source code, even though third parties are not
-compelled to copy the source along with the object code.
-
- 4. You may not copy, modify, sublicense, or distribute the Program
-except as expressly provided under this License. Any attempt
-otherwise to copy, modify, sublicense or distribute the Program is
-void, and will automatically terminate your rights under this License.
-However, parties who have received copies, or rights, from you under
-this License will not have their licenses terminated so long as such
-parties remain in full compliance.
-
- 5. You are not required to accept this License, since you have not
-signed it. However, nothing else grants you permission to modify or
-distribute the Program or its derivative works. These actions are
-prohibited by law if you do not accept this License. Therefore, by
-modifying or distributing the Program (or any work based on the
-Program), you indicate your acceptance of this License to do so, and
-all its terms and conditions for copying, distributing or modifying
-the Program or works based on it.
-
- 6. Each time you redistribute the Program (or any work based on the
-Program), the recipient automatically receives a license from the
-original licensor to copy, distribute or modify the Program subject to
-these terms and conditions. You may not impose any further
-restrictions on the recipients' exercise of the rights granted herein.
-You are not responsible for enforcing compliance by third parties to
-this License.
-
- 7. If, as a consequence of a court judgment or allegation of patent
-infringement or for any other reason (not limited to patent issues),
-conditions are imposed on you (whether by court order, agreement or
-otherwise) that contradict the conditions of this License, they do not
-excuse you from the conditions of this License. If you cannot
-distribute so as to satisfy simultaneously your obligations under this
-License and any other pertinent obligations, then as a consequence you
-may not distribute the Program at all. For example, if a patent
-license would not permit royalty-free redistribution of the Program by
-all those who receive copies directly or indirectly through you, then
-the only way you could satisfy both it and this License would be to
-refrain entirely from distribution of the Program.
-
-If any portion of this section is held invalid or unenforceable under
-any particular circumstance, the balance of the section is intended to
-apply and the section as a whole is intended to apply in other
-circumstances.
-
-It is not the purpose of this section to induce you to infringe any
-patents or other property right claims or to contest validity of any
-such claims; this section has the sole purpose of protecting the
-integrity of the free software distribution system, which is
-implemented by public license practices. Many people have made
-generous contributions to the wide range of software distributed
-through that system in reliance on consistent application of that
-system; it is up to the author/donor to decide if he or she is willing
-to distribute software through any other system and a licensee cannot
-impose that choice.
-
-This section is intended to make thoroughly clear what is believed to
-be a consequence of the rest of this License.
-
- 8. If the distribution and/or use of the Program is restricted in
-certain countries either by patents or by copyrighted interfaces, the
-original copyright holder who places the Program under this License
-may add an explicit geographical distribution limitation excluding
-those countries, so that distribution is permitted only in or among
-countries not thus excluded. In such case, this License incorporates
-the limitation as if written in the body of this License.
-
- 9. The Free Software Foundation may publish revised and/or new versions
-of the General Public License from time to time. Such new versions will
-be similar in spirit to the present version, but may differ in detail to
-address new problems or concerns.
-
-Each version is given a distinguishing version number. If the Program
-specifies a version number of this License which applies to it and "any
-later version", you have the option of following the terms and conditions
-either of that version or of any later version published by the Free
-Software Foundation. If the Program does not specify a version number of
-this License, you may choose any version ever published by the Free Software
-Foundation.
-
- 10. If you wish to incorporate parts of the Program into other free
-programs whose distribution conditions are different, write to the author
-to ask for permission. For software which is copyrighted by the Free
-Software Foundation, write to the Free Software Foundation; we sometimes
-make exceptions for this. Our decision will be guided by the two goals
-of preserving the free status of all derivatives of our free software and
-of promoting the sharing and reuse of software generally.
-
- NO WARRANTY
-
- 11. BECAUSE THE PROGRAM IS LICENSED FREE OF CHARGE, THERE IS NO WARRANTY
-FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN
-OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES
-PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED
-OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
-MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS
-TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE
-PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING,
-REPAIR OR CORRECTION.
-
- 12. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
-WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MAY MODIFY AND/OR
-REDISTRIBUTE THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES,
-INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING
-OUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED
-TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY
-YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER
-PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE
-POSSIBILITY OF SUCH DAMAGES.
-
- END OF TERMS AND CONDITIONS
-
- How to Apply These Terms to Your New Programs
-
- If you develop a new program, and you want it to be of the greatest
-possible use to the public, the best way to achieve this is to make it
-free software which everyone can redistribute and change under these terms.
-
- To do so, attach the following notices to the program. It is safest
-to attach them to the start of each source file to most effectively
-convey the exclusion of warranty; and each file should have at least
-the "copyright" line and a pointer to where the full notice is found.
-
- <one line to give the program's name and a brief idea of what it does.>
- Copyright (C) <year> <name of author>
-
- This program is free software; you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation; either version 2 of the License, or
- (at your option) any later version.
-
- This program is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- GNU General Public License for more details.
-
- You should have received a copy of the GNU General Public License
- along with this program; if not, write to the Free Software
- Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
-
-
-Also add information on how to contact you by electronic and paper mail.
-
-If the program is interactive, make it output a short notice like this
-when it starts in an interactive mode:
-
- Gnomovision version 69, Copyright (C) year name of author
- Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
- This is free software, and you are welcome to redistribute it
- under certain conditions; type `show c' for details.
-
-The hypothetical commands `show w' and `show c' should show the appropriate
-parts of the General Public License. Of course, the commands you use may
-be called something other than `show w' and `show c'; they could even be
-mouse-clicks or menu items--whatever suits your program.
-
-You should also get your employer (if you work as a programmer) or your
-school, if any, to sign a "copyright disclaimer" for the program, if
-necessary. Here is a sample; alter the names:
-
- Yoyodyne, Inc., hereby disclaims all copyright interest in the program
- `Gnomovision' (which makes passes at compilers) written by James Hacker.
-
- <signature of Ty Coon>, 1 April 1989
- Ty Coon, President of Vice
-
-This General Public License does not permit incorporating your program into
-proprietary programs. If your program is a subroutine library, you may
-consider it more useful to permit linking proprietary applications with the
-library. If this is what you want to do, use the GNU Library General
-Public License instead of this License.
Deleted: trunk/packages/rnahybrid/trunk/ChangeLog
===================================================================
--- trunk/packages/rnahybrid/trunk/ChangeLog 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/ChangeLog 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,23 +0,0 @@
-Tue Nov 16 16:46:51 2004 Marc Rehmsmeier <marc at TechFak.Uni-Bielefeld.DE>
-
- * RNAcalibrate man page: added description of output (number of
- data points, location, scale)
-
- * estimate_evd_parameters now returns the number of data
- points evd parameters have been estimated on
-
-Mon Nov 15 20:32:43 2004 Marc Rehmsmeier <marc at TechFak.Uni-Bielefeld.DE>
-
- * Added GNU General Public License to *.c and *.h files.
-
- * examples directory: renamed and added sequence files.
-
- * README: augmented (and correct) examples.
-
- * RNAeffective: proper behaviour for qflag now. Hadn't been
- working before.
-
- * Added options -u (maximum internal loop size per sequence) and
- -v (maximum bulge loop size). (some time ago)
-
-
Deleted: trunk/packages/rnahybrid/trunk/INSTALL
===================================================================
--- trunk/packages/rnahybrid/trunk/INSTALL 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/INSTALL 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,16 +0,0 @@
-Type
-
- ./configure
- make
- make install
-
-to configure, make and install RNAhybrid. To enable graphical
-output for RNAhybrid, you need the libraries g2 for ps format
-and g2 and gd for png and jpg format. Without these libraries
-only textual output is supported.
-
-
-Type
- make clean
-
-to remove object files.
Deleted: trunk/packages/rnahybrid/trunk/Makefile.am
===================================================================
--- trunk/packages/rnahybrid/trunk/Makefile.am 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/Makefile.am 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,4 +0,0 @@
-SUBDIRS = src man
-EXTRA_DIST = examples
-VERSION = 2.1
-
Deleted: trunk/packages/rnahybrid/trunk/Makefile.in
===================================================================
--- trunk/packages/rnahybrid/trunk/Makefile.in 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/Makefile.in 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,501 +0,0 @@
-# Makefile.in generated by automake 1.7.3 from Makefile.am.
-# @configure_input@
-
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002, 2003
-# Free Software Foundation, Inc.
-# This Makefile.in is free software; the Free Software Foundation
-# gives unlimited permission to copy and/or distribute it,
-# with or without modifications, as long as this notice is preserved.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
-# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-# PARTICULAR PURPOSE.
-
- at SET_MAKE@
-
-srcdir = @srcdir@
-top_srcdir = @top_srcdir@
-VPATH = @srcdir@
-pkgdatadir = $(datadir)/@PACKAGE@
-pkglibdir = $(libdir)/@PACKAGE@
-pkgincludedir = $(includedir)/@PACKAGE@
-top_builddir = .
-
-am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
-INSTALL = @INSTALL@
-install_sh_DATA = $(install_sh) -c -m 644
-install_sh_PROGRAM = $(install_sh) -c
-install_sh_SCRIPT = $(install_sh) -c
-INSTALL_HEADER = $(INSTALL_DATA)
-transform = $(program_transform_name)
-NORMAL_INSTALL = :
-PRE_INSTALL = :
-POST_INSTALL = :
-NORMAL_UNINSTALL = :
-PRE_UNINSTALL = :
-POST_UNINSTALL = :
-ACLOCAL = @ACLOCAL@
-AMDEP_FALSE = @AMDEP_FALSE@
-AMDEP_TRUE = @AMDEP_TRUE@
-AMTAR = @AMTAR@
-AUTOCONF = @AUTOCONF@
-AUTOHEADER = @AUTOHEADER@
-AUTOMAKE = @AUTOMAKE@
-AWK = @AWK@
-CC = @CC@
-CCDEPMODE = @CCDEPMODE@
-CFLAGS = @CFLAGS@
-CPP = @CPP@
-CPPFLAGS = @CPPFLAGS@
-CYGPATH_W = @CYGPATH_W@
-DEFS = @DEFS@
-DEPDIR = @DEPDIR@
-ECHO_C = @ECHO_C@
-ECHO_N = @ECHO_N@
-ECHO_T = @ECHO_T@
-EGREP = @EGREP@
-EXEEXT = @EXEEXT@
-INSTALL_DATA = @INSTALL_DATA@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
-INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
-LDFLAGS = @LDFLAGS@
-LIBOBJS = @LIBOBJS@
-LIBS = @LIBS@
-LTLIBOBJS = @LTLIBOBJS@
-MAKEINFO = @MAKEINFO@
-OBJEXT = @OBJEXT@
-PACKAGE = @PACKAGE@
-PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
-PACKAGE_NAME = @PACKAGE_NAME@
-PACKAGE_STRING = @PACKAGE_STRING@
-PACKAGE_TARNAME = @PACKAGE_TARNAME@
-PACKAGE_VERSION = @PACKAGE_VERSION@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-SET_MAKE = @SET_MAKE@
-SHELL = @SHELL@
-STRIP = @STRIP@
-VERSION = 2.1
-ac_ct_CC = @ac_ct_CC@
-ac_ct_STRIP = @ac_ct_STRIP@
-am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
-am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
-am__include = @am__include@
-am__leading_dot = @am__leading_dot@
-am__quote = @am__quote@
-bindir = @bindir@
-build_alias = @build_alias@
-datadir = @datadir@
-exec_prefix = @exec_prefix@
-host_alias = @host_alias@
-includedir = @includedir@
-infodir = @infodir@
-install_sh = @install_sh@
-libdir = @libdir@
-libexecdir = @libexecdir@
-localstatedir = @localstatedir@
-mandir = @mandir@
-oldincludedir = @oldincludedir@
-prefix = @prefix@
-program_transform_name = @program_transform_name@
-sbindir = @sbindir@
-sharedstatedir = @sharedstatedir@
-sysconfdir = @sysconfdir@
-target_alias = @target_alias@
-SUBDIRS = src man
-EXTRA_DIST = examples
-subdir = .
-ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
-mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
-CONFIG_HEADER = config.h
-CONFIG_CLEAN_FILES =
-DIST_SOURCES =
-
-RECURSIVE_TARGETS = info-recursive dvi-recursive pdf-recursive \
- ps-recursive install-info-recursive uninstall-info-recursive \
- all-recursive install-data-recursive install-exec-recursive \
- installdirs-recursive install-recursive uninstall-recursive \
- check-recursive installcheck-recursive
-DIST_COMMON = README AUTHORS COPYING ChangeLog INSTALL Makefile.am \
- Makefile.in NEWS aclocal.m4 config.guess config.h.in configure \
- configure.in depcomp install-sh missing mkinstalldirs
-DIST_SUBDIRS = $(SUBDIRS)
-all: config.h
- $(MAKE) $(AM_MAKEFLAGS) all-recursive
-
-.SUFFIXES:
-
-am__CONFIG_DISTCLEAN_FILES = config.status config.cache config.log \
- configure.lineno
-$(srcdir)/Makefile.in: Makefile.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
- cd $(top_srcdir) && \
- $(AUTOMAKE) --gnu Makefile
-Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
- cd $(top_builddir) && $(SHELL) ./config.status $@ $(am__depfiles_maybe)
-
-$(top_builddir)/config.status: $(srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
- $(SHELL) ./config.status --recheck
-$(srcdir)/configure: $(srcdir)/configure.in $(ACLOCAL_M4) $(CONFIGURE_DEPENDENCIES)
- cd $(srcdir) && $(AUTOCONF)
-
-$(ACLOCAL_M4): configure.in
- cd $(srcdir) && $(ACLOCAL) $(ACLOCAL_AMFLAGS)
-
-config.h: stamp-h1
- @if test ! -f $@; then \
- rm -f stamp-h1; \
- $(MAKE) stamp-h1; \
- else :; fi
-
-stamp-h1: $(srcdir)/config.h.in $(top_builddir)/config.status
- @rm -f stamp-h1
- cd $(top_builddir) && $(SHELL) ./config.status config.h
-
-$(srcdir)/config.h.in: $(top_srcdir)/configure.in $(ACLOCAL_M4)
- cd $(top_srcdir) && $(AUTOHEADER)
- touch $(srcdir)/config.h.in
-
-distclean-hdr:
- -rm -f config.h stamp-h1
-uninstall-info-am:
-
-# This directory's subdirectories are mostly independent; you can cd
-# into them and run `make' without going through this Makefile.
-# To change the values of `make' variables: instead of editing Makefiles,
-# (1) if the variable is set in `config.status', edit `config.status'
-# (which will cause the Makefiles to be regenerated when you run `make');
-# (2) otherwise, pass the desired values on the `make' command line.
-$(RECURSIVE_TARGETS):
- @set fnord $$MAKEFLAGS; amf=$$2; \
- dot_seen=no; \
- target=`echo $@ | sed s/-recursive//`; \
- list='$(SUBDIRS)'; for subdir in $$list; do \
- echo "Making $$target in $$subdir"; \
- if test "$$subdir" = "."; then \
- dot_seen=yes; \
- local_target="$$target-am"; \
- else \
- local_target="$$target"; \
- fi; \
- (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
- || case "$$amf" in *=*) exit 1;; *k*) fail=yes;; *) exit 1;; esac; \
- done; \
- if test "$$dot_seen" = "no"; then \
- $(MAKE) $(AM_MAKEFLAGS) "$$target-am" || exit 1; \
- fi; test -z "$$fail"
-
-mostlyclean-recursive clean-recursive distclean-recursive \
-maintainer-clean-recursive:
- @set fnord $$MAKEFLAGS; amf=$$2; \
- dot_seen=no; \
- case "$@" in \
- distclean-* | maintainer-clean-*) list='$(DIST_SUBDIRS)' ;; \
- *) list='$(SUBDIRS)' ;; \
- esac; \
- rev=''; for subdir in $$list; do \
- if test "$$subdir" = "."; then :; else \
- rev="$$subdir $$rev"; \
- fi; \
- done; \
- rev="$$rev ."; \
- target=`echo $@ | sed s/-recursive//`; \
- for subdir in $$rev; do \
- echo "Making $$target in $$subdir"; \
- if test "$$subdir" = "."; then \
- local_target="$$target-am"; \
- else \
- local_target="$$target"; \
- fi; \
- (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
- || case "$$amf" in *=*) exit 1;; *k*) fail=yes;; *) exit 1;; esac; \
- done && test -z "$$fail"
-tags-recursive:
- list='$(SUBDIRS)'; for subdir in $$list; do \
- test "$$subdir" = . || (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) tags); \
- done
-ctags-recursive:
- list='$(SUBDIRS)'; for subdir in $$list; do \
- test "$$subdir" = . || (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) ctags); \
- done
-
-ETAGS = etags
-ETAGSFLAGS =
-
-CTAGS = ctags
-CTAGSFLAGS =
-
-tags: TAGS
-
-ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
- list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
- unique=`for i in $$list; do \
- if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
- done | \
- $(AWK) ' { files[$$0] = 1; } \
- END { for (i in files) print i; }'`; \
- mkid -fID $$unique
-
-TAGS: tags-recursive $(HEADERS) $(SOURCES) config.h.in $(TAGS_DEPENDENCIES) \
- $(TAGS_FILES) $(LISP)
- tags=; \
- here=`pwd`; \
- list='$(SUBDIRS)'; for subdir in $$list; do \
- if test "$$subdir" = .; then :; else \
- test -f $$subdir/TAGS && tags="$$tags -i $$here/$$subdir/TAGS"; \
- fi; \
- done; \
- list='$(SOURCES) $(HEADERS) config.h.in $(LISP) $(TAGS_FILES)'; \
- unique=`for i in $$list; do \
- if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
- done | \
- $(AWK) ' { files[$$0] = 1; } \
- END { for (i in files) print i; }'`; \
- test -z "$(ETAGS_ARGS)$$tags$$unique" \
- || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
- $$tags $$unique
-
-ctags: CTAGS
-CTAGS: ctags-recursive $(HEADERS) $(SOURCES) config.h.in $(TAGS_DEPENDENCIES) \
- $(TAGS_FILES) $(LISP)
- tags=; \
- here=`pwd`; \
- list='$(SOURCES) $(HEADERS) config.h.in $(LISP) $(TAGS_FILES)'; \
- unique=`for i in $$list; do \
- if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
- done | \
- $(AWK) ' { files[$$0] = 1; } \
- END { for (i in files) print i; }'`; \
- test -z "$(CTAGS_ARGS)$$tags$$unique" \
- || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
- $$tags $$unique
-
-GTAGS:
- here=`$(am__cd) $(top_builddir) && pwd` \
- && cd $(top_srcdir) \
- && gtags -i $(GTAGS_ARGS) $$here
-
-distclean-tags:
- -rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = .
-distdir = $(PACKAGE)-$(VERSION)
-
-am__remove_distdir = \
- { test ! -d $(distdir) \
- || { find $(distdir) -type d ! -perm -200 -exec chmod u+w {} ';' \
- && rm -fr $(distdir); }; }
-
-GZIP_ENV = --best
-distuninstallcheck_listfiles = find . -type f -print
-distcleancheck_listfiles = find . -type f -print
-
-distdir: $(DISTFILES)
- $(am__remove_distdir)
- mkdir $(distdir)
- @srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
- topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
- list='$(DISTFILES)'; for file in $$list; do \
- case $$file in \
- $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
- $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
- esac; \
- if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
- dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
- if test "$$dir" != "$$file" && test "$$dir" != "."; then \
- dir="/$$dir"; \
- $(mkinstalldirs) "$(distdir)$$dir"; \
- else \
- dir=''; \
- fi; \
- if test -d $$d/$$file; then \
- if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
- cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \
- fi; \
- cp -pR $$d/$$file $(distdir)$$dir || exit 1; \
- else \
- test -f $(distdir)/$$file \
- || cp -p $$d/$$file $(distdir)/$$file \
- || exit 1; \
- fi; \
- done
- list='$(SUBDIRS)'; for subdir in $$list; do \
- if test "$$subdir" = .; then :; else \
- test -d $(distdir)/$$subdir \
- || mkdir $(distdir)/$$subdir \
- || exit 1; \
- (cd $$subdir && \
- $(MAKE) $(AM_MAKEFLAGS) \
- top_distdir="$(top_distdir)" \
- distdir=../$(distdir)/$$subdir \
- distdir) \
- || exit 1; \
- fi; \
- done
- -find $(distdir) -type d ! -perm -777 -exec chmod a+rwx {} \; -o \
- ! -type d ! -perm -444 -links 1 -exec chmod a+r {} \; -o \
- ! -type d ! -perm -400 -exec chmod a+r {} \; -o \
- ! -type d ! -perm -444 -exec $(SHELL) $(install_sh) -c -m a+r {} {} \; \
- || chmod -R a+r $(distdir)
-dist-gzip: distdir
- $(AMTAR) chof - $(distdir) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz
- $(am__remove_distdir)
-
-dist dist-all: distdir
- $(AMTAR) chof - $(distdir) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz
- $(am__remove_distdir)
-
-# This target untars the dist file and tries a VPATH configuration. Then
-# it guarantees that the distribution is self-contained by making another
-# tarfile.
-distcheck: dist
- $(am__remove_distdir)
- GZIP=$(GZIP_ENV) gunzip -c $(distdir).tar.gz | $(AMTAR) xf -
- chmod -R a-w $(distdir); chmod a+w $(distdir)
- mkdir $(distdir)/_build
- mkdir $(distdir)/_inst
- chmod a-w $(distdir)
- dc_install_base=`$(am__cd) $(distdir)/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \
- && dc_destdir="$${TMPDIR-/tmp}/am-dc-$$$$/" \
- && cd $(distdir)/_build \
- && ../configure --srcdir=.. --prefix="$$dc_install_base" \
- $(DISTCHECK_CONFIGURE_FLAGS) \
- && $(MAKE) $(AM_MAKEFLAGS) \
- && $(MAKE) $(AM_MAKEFLAGS) dvi \
- && $(MAKE) $(AM_MAKEFLAGS) check \
- && $(MAKE) $(AM_MAKEFLAGS) install \
- && $(MAKE) $(AM_MAKEFLAGS) installcheck \
- && $(MAKE) $(AM_MAKEFLAGS) uninstall \
- && $(MAKE) $(AM_MAKEFLAGS) distuninstallcheck_dir="$$dc_install_base" \
- distuninstallcheck \
- && chmod -R a-w "$$dc_install_base" \
- && ({ \
- (cd ../.. && $(mkinstalldirs) "$$dc_destdir") \
- && $(MAKE) $(AM_MAKEFLAGS) DESTDIR="$$dc_destdir" install \
- && $(MAKE) $(AM_MAKEFLAGS) DESTDIR="$$dc_destdir" uninstall \
- && $(MAKE) $(AM_MAKEFLAGS) DESTDIR="$$dc_destdir" \
- distuninstallcheck_dir="$$dc_destdir" distuninstallcheck; \
- } || { rm -rf "$$dc_destdir"; exit 1; }) \
- && rm -rf "$$dc_destdir" \
- && $(MAKE) $(AM_MAKEFLAGS) dist-gzip \
- && rm -f $(distdir).tar.gz \
- && $(MAKE) $(AM_MAKEFLAGS) distcleancheck
- $(am__remove_distdir)
- @echo "$(distdir).tar.gz is ready for distribution" | \
- sed 'h;s/./=/g;p;x;p;x'
-distuninstallcheck:
- cd $(distuninstallcheck_dir) \
- && test `$(distuninstallcheck_listfiles) | wc -l` -le 1 \
- || { echo "ERROR: files left after uninstall:" ; \
- if test -n "$(DESTDIR)"; then \
- echo " (check DESTDIR support)"; \
- fi ; \
- $(distuninstallcheck_listfiles) ; \
- exit 1; } >&2
-distcleancheck: distclean
- if test '$(srcdir)' = . ; then \
- echo "ERROR: distcleancheck can only run from a VPATH build" ; \
- exit 1 ; \
- fi
- test `$(distcleancheck_listfiles) | wc -l` -eq 0 \
- || { echo "ERROR: files left in build directory after distclean:" ; \
- $(distcleancheck_listfiles) ; \
- exit 1; } >&2
-check-am: all-am
-check: check-recursive
-all-am: Makefile config.h
-installdirs: installdirs-recursive
-installdirs-am:
-
-install: install-recursive
-install-exec: install-exec-recursive
-install-data: install-data-recursive
-uninstall: uninstall-recursive
-
-install-am: all-am
- @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am
-
-installcheck: installcheck-recursive
-install-strip:
- $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
- INSTALL_STRIP_FLAG=-s \
- `test -z '$(STRIP)' || \
- echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
-mostlyclean-generic:
-
-clean-generic:
-
-distclean-generic:
- -rm -f Makefile $(CONFIG_CLEAN_FILES)
-
-maintainer-clean-generic:
- @echo "This command is intended for maintainers to use"
- @echo "it deletes files that may require special tools to rebuild."
-clean: clean-recursive
-
-clean-am: clean-generic mostlyclean-am
-
-distclean: distclean-recursive
- -rm -f $(am__CONFIG_DISTCLEAN_FILES)
-distclean-am: clean-am distclean-generic distclean-hdr distclean-tags
-
-dvi: dvi-recursive
-
-dvi-am:
-
-info: info-recursive
-
-info-am:
-
-install-data-am:
-
-install-exec-am:
-
-install-info: install-info-recursive
-
-install-man:
-
-installcheck-am:
-
-maintainer-clean: maintainer-clean-recursive
- -rm -f $(am__CONFIG_DISTCLEAN_FILES)
- -rm -rf autom4te.cache
-maintainer-clean-am: distclean-am maintainer-clean-generic
-
-mostlyclean: mostlyclean-recursive
-
-mostlyclean-am: mostlyclean-generic
-
-pdf: pdf-recursive
-
-pdf-am:
-
-ps: ps-recursive
-
-ps-am:
-
-uninstall-am: uninstall-info-am
-
-uninstall-info: uninstall-info-recursive
-
-.PHONY: $(RECURSIVE_TARGETS) CTAGS GTAGS all all-am check check-am clean \
- clean-generic clean-recursive ctags ctags-recursive dist \
- dist-all dist-gzip distcheck distclean distclean-generic \
- distclean-hdr distclean-recursive distclean-tags distcleancheck \
- distdir distuninstallcheck dvi dvi-am dvi-recursive info \
- info-am info-recursive install install-am install-data \
- install-data-am install-data-recursive install-exec \
- install-exec-am install-exec-recursive install-info \
- install-info-am install-info-recursive install-man \
- install-recursive install-strip installcheck installcheck-am \
- installdirs installdirs-am installdirs-recursive \
- maintainer-clean maintainer-clean-generic \
- maintainer-clean-recursive mostlyclean mostlyclean-generic \
- mostlyclean-recursive pdf pdf-am pdf-recursive ps ps-am \
- ps-recursive tags tags-recursive uninstall uninstall-am \
- uninstall-info-am uninstall-info-recursive uninstall-recursive
-
-# Tell versions [3.59,3.63) of GNU make to not export all variables.
-# Otherwise a system limit (for SysV at least) may be exceeded.
-.NOEXPORT:
Deleted: trunk/packages/rnahybrid/trunk/NEWS
===================================================================
Deleted: trunk/packages/rnahybrid/trunk/README
===================================================================
--- trunk/packages/rnahybrid/trunk/README 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/README 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,130 +0,0 @@
-RNAhybrid 2.0
-
-RNAhybrid is a tool for finding the minimum free energy hybridisation
-of a long (target) and a short (query) RNA. The hybridisation is
-performed in a kind of domain mode, ie. the short sequence is
-hybridised to the best fitting part of the long one. The tool is
-primarily meant as a means for microRNA target prediction. In
-addition to mfes, the program calculates p-values based on extreme
-value distributions of length normalised energies.
-
-RNAcalibrate is a tool for calibrating minimum free energy (mfe)
-hybridisations performed with RNAhybrid. It searches a random database
-that can be given on the command line or otherwise generates random
-sequences according to given sample size, length distribution
-parameters and dinucleotide frequencies. To the empirical distribution
-of length normalised minimum free energies, parameters of an extreme
-value distribution (evd) are fitted. The resulting location and scale
-parameters of the evd can then be given to RNAhybrid for the
-calculation of mfe p-values.
-
-RNAeffective is a tool for determining the effective number of
-orthologous miRNA targets. This number can be used for the
-calculation of more accurate joint p-values in multi-species
-analyses. RNAeffective searches a set of target sequences with random
-miRNAs that can be given on the command line or otherwise generates
-random sequences according to given sample size, length distribution
-parameters and dinucleotide frequencies. The empirical distribution of
-joint p-values is compared to the p-values themselves, and the
-effective number of independent targets is the one that reduces the
-deviation between the two distributions.
-
-
-For installation, see the file INSTALL.
-
-
-After installation, try the following examples (make sure that RNAhybrid,
-RNAcalibrate and RNAeffective are in your PATH by then):
-
-
- RNAhybrid -s 3utr_worm -t examples/cel-hbl-1.fasta -q examples/cel-let-7.fasta
-
-
-This searches the C. elegans hbl-1 3'UTR with the C. elegans let-7
-miRNA. The option -s tells RNAhybrid to quickly estimate statistical
-parameters from "minimal duplex energies" under the assumption that
-the target sequences are worm (C. elegans, to be precise) 3'UTR
-sequences. You can also use 3utr_fly and 3utr_human.
-
-To get a better estimate of statistical parameters, use RNAcalibrate:
-
-
- RNAcalibrate -d examples/3UTR_worm.freq -k 50 -l 50,30 -q examples/cel-let-7.fasta
-
-
-This generates 50 random sequences with lengths distributed according
-to a normal (Gaussian) distribution with mean 50 and standard
-deviation 30, following the dinucleotide distribution that is defined
-in the file 3UTR_worm.freq in the examples dicrectory. The output are
-the parameters of an extreme value distribution (location and
-shape). Since with 50 random sequences the estimate is not very
-accurate, you should use larger numbers of several thousand. Default
-values for -k and -l are 5000 and 500,300, respectively, so you can
-omit these options.
-
-The estimated parameters can be used with RNAhybrid for accurate
-p-value calculation of length normalised minimum free energies:
-
-
-RNAhybrid -d 1.9,0.28 -t examples/cel-hbl-1.fasta -q examples/cel-let-7.fasta
-
-
-Here, 1.9 is the location parameter and 0.28 the shape parameter of
-the assumed extreme value distribution.
-
-If you want to force miRNA/target duplexes to have a helix in a specified
-part, for example at the 5'-end of the miRNA, use the -f option:
-
-
-RNAhybrid -f 2,7 -d 1.9,0.28 -t examples/cel-hbl-1.fasta -q examples/cel-let-7.fasta
-
-
--f 2,7 tells RNAhybrid to force the duplexes to have a helix (ie. an
-uninterrupted stretch of base pairs, no bulges, no internal loops)
-from nucleotide 2 to nucleotide 7 in the miRNA.
-
-Since such a structural constraint affects the statistical
-significance of matches, you should use RNAcalibrate with the same
-constraint:
-
-
-RNAcalibrate -f 2,7 -d examples/3UTR_worm.freq -k 50 -l 50,30 -q examples/cel-let-7.fasta
-
-
-Be aware that you might need a larger sample (larger -k value) to get
-a good estimate of statistical parameters, especially for shorter
-sequences. This is, because it is not for all miRNA/target
-combinations possible to form a helix at the specified positions.
-
-To get a feeling of how stable the parameter estimates are, repeat the
-calibration several times and have a look at the resulting values.
-
-
-In a cross-species analysis, you would search C. briggsae sequences as
-well:
-
-
-RNAhybrid -s 3utr_worm -t examples/cbr-hbl-1.fasta -q examples/cel-let-7.fasta
-
-
-To assess how much evidence the use of multiple species adds, you can
-calculate the effective number of orthologous sequences:
-
-
-RNAeffective -k 30 -s -t examples/hbl-1.fasta -q examples/cel-let-7.fasta
-
-
-Here, hbl-1.fasta contains both hbl-1 3'UTR sequences (C. elegans and
-C. briggsae). The output tells you an effective number of 1.3, which
-means that the two sequences are statistically rather dependent, and
-that it is not that surprising to find a good hit in cbr-hbl-1 if you
-have found one in cel-hbl-1. The closer the effective number is to the
-actual number (2 in this example), the statistically more independent
-the sequences are. Like in the RNAcalibrate examples, the -k option
-should take larger values, although the calculations are very time
-consuming.
-
-
-In general, target files (-t option) and query (miRNA) files (-q
-option) can be multiple fasta files. The searches are performed in all
-combinations (all queries vs. all targets).
Deleted: trunk/packages/rnahybrid/trunk/aclocal.m4
===================================================================
--- trunk/packages/rnahybrid/trunk/aclocal.m4 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/aclocal.m4 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,852 +0,0 @@
-# generated automatically by aclocal 1.7.3 -*- Autoconf -*-
-
-# Copyright (C) 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
-# This file is free software; the Free Software Foundation
-# gives unlimited permission to copy and/or distribute it,
-# with or without modifications, as long as this notice is preserved.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
-# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-# PARTICULAR PURPOSE.
-
-# Do all the work for Automake. -*- Autoconf -*-
-
-# This macro actually does too much some checks are only needed if
-# your package does certain things. But this isn't really a big deal.
-
-# Copyright 1996, 1997, 1998, 1999, 2000, 2001, 2002, 2003
-# Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# serial 9
-
-# There are a few dirty hacks below to avoid letting `AC_PROG_CC' be
-# written in clear, in which case automake, when reading aclocal.m4,
-# will think it sees a *use*, and therefore will trigger all it's
-# C support machinery. Also note that it means that autoscan, seeing
-# CC etc. in the Makefile, will ask for an AC_PROG_CC use...
-
-
-AC_PREREQ([2.54])
-
-# Autoconf 2.50 wants to disallow AM_ names. We explicitly allow
-# the ones we care about.
-m4_pattern_allow([^AM_[A-Z]+FLAGS$])dnl
-
-# AM_INIT_AUTOMAKE(PACKAGE, VERSION, [NO-DEFINE])
-# AM_INIT_AUTOMAKE([OPTIONS])
-# -----------------------------------------------
-# The call with PACKAGE and VERSION arguments is the old style
-# call (pre autoconf-2.50), which is being phased out. PACKAGE
-# and VERSION should now be passed to AC_INIT and removed from
-# the call to AM_INIT_AUTOMAKE.
-# We support both call styles for the transition. After
-# the next Automake release, Autoconf can make the AC_INIT
-# arguments mandatory, and then we can depend on a new Autoconf
-# release and drop the old call support.
-AC_DEFUN([AM_INIT_AUTOMAKE],
-[AC_REQUIRE([AM_SET_CURRENT_AUTOMAKE_VERSION])dnl
- AC_REQUIRE([AC_PROG_INSTALL])dnl
-# test to see if srcdir already configured
-if test "`cd $srcdir && pwd`" != "`pwd`" &&
- test -f $srcdir/config.status; then
- AC_MSG_ERROR([source directory already configured; run "make distclean" there first])
-fi
-
-# test whether we have cygpath
-if test -z "$CYGPATH_W"; then
- if (cygpath --version) >/dev/null 2>/dev/null; then
- CYGPATH_W='cygpath -w'
- else
- CYGPATH_W=echo
- fi
-fi
-AC_SUBST([CYGPATH_W])
-
-# Define the identity of the package.
-dnl Distinguish between old-style and new-style calls.
-m4_ifval([$2],
-[m4_ifval([$3], [_AM_SET_OPTION([no-define])])dnl
- AC_SUBST([PACKAGE], [$1])dnl
- AC_SUBST([VERSION], [$2])],
-[_AM_SET_OPTIONS([$1])dnl
- AC_SUBST([PACKAGE], ['AC_PACKAGE_TARNAME'])dnl
- AC_SUBST([VERSION], ['AC_PACKAGE_VERSION'])])dnl
-
-_AM_IF_OPTION([no-define],,
-[AC_DEFINE_UNQUOTED(PACKAGE, "$PACKAGE", [Name of package])
- AC_DEFINE_UNQUOTED(VERSION, "$VERSION", [Version number of package])])dnl
-
-# Some tools Automake needs.
-AC_REQUIRE([AM_SANITY_CHECK])dnl
-AC_REQUIRE([AC_ARG_PROGRAM])dnl
-AM_MISSING_PROG(ACLOCAL, aclocal-${am__api_version})
-AM_MISSING_PROG(AUTOCONF, autoconf)
-AM_MISSING_PROG(AUTOMAKE, automake-${am__api_version})
-AM_MISSING_PROG(AUTOHEADER, autoheader)
-AM_MISSING_PROG(MAKEINFO, makeinfo)
-AM_MISSING_PROG(AMTAR, tar)
-AM_PROG_INSTALL_SH
-AM_PROG_INSTALL_STRIP
-# We need awk for the "check" target. The system "awk" is bad on
-# some platforms.
-AC_REQUIRE([AC_PROG_AWK])dnl
-AC_REQUIRE([AC_PROG_MAKE_SET])dnl
-AC_REQUIRE([AM_SET_LEADING_DOT])dnl
-
-_AM_IF_OPTION([no-dependencies],,
-[AC_PROVIDE_IFELSE([AC_PROG_CC],
- [_AM_DEPENDENCIES(CC)],
- [define([AC_PROG_CC],
- defn([AC_PROG_CC])[_AM_DEPENDENCIES(CC)])])dnl
-AC_PROVIDE_IFELSE([AC_PROG_CXX],
- [_AM_DEPENDENCIES(CXX)],
- [define([AC_PROG_CXX],
- defn([AC_PROG_CXX])[_AM_DEPENDENCIES(CXX)])])dnl
-])
-])
-
-
-# When config.status generates a header, we must update the stamp-h file.
-# This file resides in the same directory as the config header
-# that is generated. The stamp files are numbered to have different names.
-
-# Autoconf calls _AC_AM_CONFIG_HEADER_HOOK (when defined) in the
-# loop where config.status creates the headers, so we can generate
-# our stamp files there.
-AC_DEFUN([_AC_AM_CONFIG_HEADER_HOOK],
-[# Compute $1's index in $config_headers.
-_am_stamp_count=1
-for _am_header in $config_headers :; do
- case $_am_header in
- $1 | $1:* )
- break ;;
- * )
- _am_stamp_count=`expr $_am_stamp_count + 1` ;;
- esac
-done
-echo "timestamp for $1" >`AS_DIRNAME([$1])`/stamp-h[]$_am_stamp_count])
-
-# Copyright 2002 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-
-# AM_AUTOMAKE_VERSION(VERSION)
-# ----------------------------
-# Automake X.Y traces this macro to ensure aclocal.m4 has been
-# generated from the m4 files accompanying Automake X.Y.
-AC_DEFUN([AM_AUTOMAKE_VERSION],[am__api_version="1.7"])
-
-# AM_SET_CURRENT_AUTOMAKE_VERSION
-# -------------------------------
-# Call AM_AUTOMAKE_VERSION so it can be traced.
-# This function is AC_REQUIREd by AC_INIT_AUTOMAKE.
-AC_DEFUN([AM_SET_CURRENT_AUTOMAKE_VERSION],
- [AM_AUTOMAKE_VERSION([1.7.3])])
-
-# Helper functions for option handling. -*- Autoconf -*-
-
-# Copyright 2001, 2002 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# serial 2
-
-# _AM_MANGLE_OPTION(NAME)
-# -----------------------
-AC_DEFUN([_AM_MANGLE_OPTION],
-[[_AM_OPTION_]m4_bpatsubst($1, [[^a-zA-Z0-9_]], [_])])
-
-# _AM_SET_OPTION(NAME)
-# ------------------------------
-# Set option NAME. Presently that only means defining a flag for this option.
-AC_DEFUN([_AM_SET_OPTION],
-[m4_define(_AM_MANGLE_OPTION([$1]), 1)])
-
-# _AM_SET_OPTIONS(OPTIONS)
-# ----------------------------------
-# OPTIONS is a space-separated list of Automake options.
-AC_DEFUN([_AM_SET_OPTIONS],
-[AC_FOREACH([_AM_Option], [$1], [_AM_SET_OPTION(_AM_Option)])])
-
-# _AM_IF_OPTION(OPTION, IF-SET, [IF-NOT-SET])
-# -------------------------------------------
-# Execute IF-SET if OPTION is set, IF-NOT-SET otherwise.
-AC_DEFUN([_AM_IF_OPTION],
-[m4_ifset(_AM_MANGLE_OPTION([$1]), [$2], [$3])])
-
-#
-# Check to make sure that the build environment is sane.
-#
-
-# Copyright 1996, 1997, 2000, 2001 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# serial 3
-
-# AM_SANITY_CHECK
-# ---------------
-AC_DEFUN([AM_SANITY_CHECK],
-[AC_MSG_CHECKING([whether build environment is sane])
-# Just in case
-sleep 1
-echo timestamp > conftest.file
-# Do `set' in a subshell so we don't clobber the current shell's
-# arguments. Must try -L first in case configure is actually a
-# symlink; some systems play weird games with the mod time of symlinks
-# (eg FreeBSD returns the mod time of the symlink's containing
-# directory).
-if (
- set X `ls -Lt $srcdir/configure conftest.file 2> /dev/null`
- if test "$[*]" = "X"; then
- # -L didn't work.
- set X `ls -t $srcdir/configure conftest.file`
- fi
- rm -f conftest.file
- if test "$[*]" != "X $srcdir/configure conftest.file" \
- && test "$[*]" != "X conftest.file $srcdir/configure"; then
-
- # If neither matched, then we have a broken ls. This can happen
- # if, for instance, CONFIG_SHELL is bash and it inherits a
- # broken ls alias from the environment. This has actually
- # happened. Such a system could not be considered "sane".
- AC_MSG_ERROR([ls -t appears to fail. Make sure there is not a broken
-alias in your environment])
- fi
-
- test "$[2]" = conftest.file
- )
-then
- # Ok.
- :
-else
- AC_MSG_ERROR([newly created file is older than distributed files!
-Check your system clock])
-fi
-AC_MSG_RESULT(yes)])
-
-# -*- Autoconf -*-
-
-
-# Copyright 1997, 1999, 2000, 2001 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# serial 3
-
-# AM_MISSING_PROG(NAME, PROGRAM)
-# ------------------------------
-AC_DEFUN([AM_MISSING_PROG],
-[AC_REQUIRE([AM_MISSING_HAS_RUN])
-$1=${$1-"${am_missing_run}$2"}
-AC_SUBST($1)])
-
-
-# AM_MISSING_HAS_RUN
-# ------------------
-# Define MISSING if not defined so far and test if it supports --run.
-# If it does, set am_missing_run to use it, otherwise, to nothing.
-AC_DEFUN([AM_MISSING_HAS_RUN],
-[AC_REQUIRE([AM_AUX_DIR_EXPAND])dnl
-test x"${MISSING+set}" = xset || MISSING="\${SHELL} $am_aux_dir/missing"
-# Use eval to expand $SHELL
-if eval "$MISSING --run true"; then
- am_missing_run="$MISSING --run "
-else
- am_missing_run=
- AC_MSG_WARN([`missing' script is too old or missing])
-fi
-])
-
-# AM_AUX_DIR_EXPAND
-
-# Copyright 2001 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# For projects using AC_CONFIG_AUX_DIR([foo]), Autoconf sets
-# $ac_aux_dir to `$srcdir/foo'. In other projects, it is set to
-# `$srcdir', `$srcdir/..', or `$srcdir/../..'.
-#
-# Of course, Automake must honor this variable whenever it calls a
-# tool from the auxiliary directory. The problem is that $srcdir (and
-# therefore $ac_aux_dir as well) can be either absolute or relative,
-# depending on how configure is run. This is pretty annoying, since
-# it makes $ac_aux_dir quite unusable in subdirectories: in the top
-# source directory, any form will work fine, but in subdirectories a
-# relative path needs to be adjusted first.
-#
-# $ac_aux_dir/missing
-# fails when called from a subdirectory if $ac_aux_dir is relative
-# $top_srcdir/$ac_aux_dir/missing
-# fails if $ac_aux_dir is absolute,
-# fails when called from a subdirectory in a VPATH build with
-# a relative $ac_aux_dir
-#
-# The reason of the latter failure is that $top_srcdir and $ac_aux_dir
-# are both prefixed by $srcdir. In an in-source build this is usually
-# harmless because $srcdir is `.', but things will broke when you
-# start a VPATH build or use an absolute $srcdir.
-#
-# So we could use something similar to $top_srcdir/$ac_aux_dir/missing,
-# iff we strip the leading $srcdir from $ac_aux_dir. That would be:
-# am_aux_dir='\$(top_srcdir)/'`expr "$ac_aux_dir" : "$srcdir//*\(.*\)"`
-# and then we would define $MISSING as
-# MISSING="\${SHELL} $am_aux_dir/missing"
-# This will work as long as MISSING is not called from configure, because
-# unfortunately $(top_srcdir) has no meaning in configure.
-# However there are other variables, like CC, which are often used in
-# configure, and could therefore not use this "fixed" $ac_aux_dir.
-#
-# Another solution, used here, is to always expand $ac_aux_dir to an
-# absolute PATH. The drawback is that using absolute paths prevent a
-# configured tree to be moved without reconfiguration.
-
-# Rely on autoconf to set up CDPATH properly.
-AC_PREREQ([2.50])
-
-AC_DEFUN([AM_AUX_DIR_EXPAND], [
-# expand $ac_aux_dir to an absolute path
-am_aux_dir=`cd $ac_aux_dir && pwd`
-])
-
-# AM_PROG_INSTALL_SH
-# ------------------
-# Define $install_sh.
-
-# Copyright 2001 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-AC_DEFUN([AM_PROG_INSTALL_SH],
-[AC_REQUIRE([AM_AUX_DIR_EXPAND])dnl
-install_sh=${install_sh-"$am_aux_dir/install-sh"}
-AC_SUBST(install_sh)])
-
-# AM_PROG_INSTALL_STRIP
-
-# Copyright 2001 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# One issue with vendor `install' (even GNU) is that you can't
-# specify the program used to strip binaries. This is especially
-# annoying in cross-compiling environments, where the build's strip
-# is unlikely to handle the host's binaries.
-# Fortunately install-sh will honor a STRIPPROG variable, so we
-# always use install-sh in `make install-strip', and initialize
-# STRIPPROG with the value of the STRIP variable (set by the user).
-AC_DEFUN([AM_PROG_INSTALL_STRIP],
-[AC_REQUIRE([AM_PROG_INSTALL_SH])dnl
-# Installed binaries are usually stripped using `strip' when the user
-# run `make install-strip'. However `strip' might not be the right
-# tool to use in cross-compilation environments, therefore Automake
-# will honor the `STRIP' environment variable to overrule this program.
-dnl Don't test for $cross_compiling = yes, because it might be `maybe'.
-if test "$cross_compiling" != no; then
- AC_CHECK_TOOL([STRIP], [strip], :)
-fi
-INSTALL_STRIP_PROGRAM="\${SHELL} \$(install_sh) -c -s"
-AC_SUBST([INSTALL_STRIP_PROGRAM])])
-
-# -*- Autoconf -*-
-# Copyright (C) 2003 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# serial 1
-
-# Check whether the underlying file-system supports filenames
-# with a leading dot. For instance MS-DOS doesn't.
-AC_DEFUN([AM_SET_LEADING_DOT],
-[rm -rf .tst 2>/dev/null
-mkdir .tst 2>/dev/null
-if test -d .tst; then
- am__leading_dot=.
-else
- am__leading_dot=_
-fi
-rmdir .tst 2>/dev/null
-AC_SUBST([am__leading_dot])])
-
-# serial 5 -*- Autoconf -*-
-
-# Copyright (C) 1999, 2000, 2001, 2002, 2003 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-
-# There are a few dirty hacks below to avoid letting `AC_PROG_CC' be
-# written in clear, in which case automake, when reading aclocal.m4,
-# will think it sees a *use*, and therefore will trigger all it's
-# C support machinery. Also note that it means that autoscan, seeing
-# CC etc. in the Makefile, will ask for an AC_PROG_CC use...
-
-
-
-# _AM_DEPENDENCIES(NAME)
-# ----------------------
-# See how the compiler implements dependency checking.
-# NAME is "CC", "CXX", "GCJ", or "OBJC".
-# We try a few techniques and use that to set a single cache variable.
-#
-# We don't AC_REQUIRE the corresponding AC_PROG_CC since the latter was
-# modified to invoke _AM_DEPENDENCIES(CC); we would have a circular
-# dependency, and given that the user is not expected to run this macro,
-# just rely on AC_PROG_CC.
-AC_DEFUN([_AM_DEPENDENCIES],
-[AC_REQUIRE([AM_SET_DEPDIR])dnl
-AC_REQUIRE([AM_OUTPUT_DEPENDENCY_COMMANDS])dnl
-AC_REQUIRE([AM_MAKE_INCLUDE])dnl
-AC_REQUIRE([AM_DEP_TRACK])dnl
-
-ifelse([$1], CC, [depcc="$CC" am_compiler_list=],
- [$1], CXX, [depcc="$CXX" am_compiler_list=],
- [$1], OBJC, [depcc="$OBJC" am_compiler_list='gcc3 gcc'],
- [$1], GCJ, [depcc="$GCJ" am_compiler_list='gcc3 gcc'],
- [depcc="$$1" am_compiler_list=])
-
-AC_CACHE_CHECK([dependency style of $depcc],
- [am_cv_$1_dependencies_compiler_type],
-[if test -z "$AMDEP_TRUE" && test -f "$am_depcomp"; then
- # We make a subdir and do the tests there. Otherwise we can end up
- # making bogus files that we don't know about and never remove. For
- # instance it was reported that on HP-UX the gcc test will end up
- # making a dummy file named `D' -- because `-MD' means `put the output
- # in D'.
- mkdir conftest.dir
- # Copy depcomp to subdir because otherwise we won't find it if we're
- # using a relative directory.
- cp "$am_depcomp" conftest.dir
- cd conftest.dir
-
- am_cv_$1_dependencies_compiler_type=none
- if test "$am_compiler_list" = ""; then
- am_compiler_list=`sed -n ['s/^#*\([a-zA-Z0-9]*\))$/\1/p'] < ./depcomp`
- fi
- for depmode in $am_compiler_list; do
- # We need to recreate these files for each test, as the compiler may
- # overwrite some of them when testing with obscure command lines.
- # This happens at least with the AIX C compiler.
- echo '#include "conftest.h"' > conftest.c
- echo 'int i;' > conftest.h
- echo "${am__include} ${am__quote}conftest.Po${am__quote}" > confmf
-
- case $depmode in
- nosideeffect)
- # after this tag, mechanisms are not by side-effect, so they'll
- # only be used when explicitly requested
- if test "x$enable_dependency_tracking" = xyes; then
- continue
- else
- break
- fi
- ;;
- none) break ;;
- esac
- # We check with `-c' and `-o' for the sake of the "dashmstdout"
- # mode. It turns out that the SunPro C++ compiler does not properly
- # handle `-M -o', and we need to detect this.
- if depmode=$depmode \
- source=conftest.c object=conftest.o \
- depfile=conftest.Po tmpdepfile=conftest.TPo \
- $SHELL ./depcomp $depcc -c -o conftest.o conftest.c \
- >/dev/null 2>conftest.err &&
- grep conftest.h conftest.Po > /dev/null 2>&1 &&
- ${MAKE-make} -s -f confmf > /dev/null 2>&1; then
- # icc doesn't choke on unknown options, it will just issue warnings
- # (even with -Werror). So we grep stderr for any message
- # that says an option was ignored.
- if grep 'ignoring option' conftest.err >/dev/null 2>&1; then :; else
- am_cv_$1_dependencies_compiler_type=$depmode
- break
- fi
- fi
- done
-
- cd ..
- rm -rf conftest.dir
-else
- am_cv_$1_dependencies_compiler_type=none
-fi
-])
-AC_SUBST([$1DEPMODE], [depmode=$am_cv_$1_dependencies_compiler_type])
-AM_CONDITIONAL([am__fastdep$1], [
- test "x$enable_dependency_tracking" != xno \
- && test "$am_cv_$1_dependencies_compiler_type" = gcc3])
-])
-
-
-# AM_SET_DEPDIR
-# -------------
-# Choose a directory name for dependency files.
-# This macro is AC_REQUIREd in _AM_DEPENDENCIES
-AC_DEFUN([AM_SET_DEPDIR],
-[AC_REQUIRE([AM_SET_LEADING_DOT])dnl
-AC_SUBST([DEPDIR], ["${am__leading_dot}deps"])dnl
-])
-
-
-# AM_DEP_TRACK
-# ------------
-AC_DEFUN([AM_DEP_TRACK],
-[AC_ARG_ENABLE(dependency-tracking,
-[ --disable-dependency-tracking Speeds up one-time builds
- --enable-dependency-tracking Do not reject slow dependency extractors])
-if test "x$enable_dependency_tracking" != xno; then
- am_depcomp="$ac_aux_dir/depcomp"
- AMDEPBACKSLASH='\'
-fi
-AM_CONDITIONAL([AMDEP], [test "x$enable_dependency_tracking" != xno])
-AC_SUBST([AMDEPBACKSLASH])
-])
-
-# Generate code to set up dependency tracking. -*- Autoconf -*-
-
-# Copyright 1999, 2000, 2001, 2002 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-#serial 2
-
-# _AM_OUTPUT_DEPENDENCY_COMMANDS
-# ------------------------------
-AC_DEFUN([_AM_OUTPUT_DEPENDENCY_COMMANDS],
-[for mf in $CONFIG_FILES; do
- # Strip MF so we end up with the name of the file.
- mf=`echo "$mf" | sed -e 's/:.*$//'`
- # Check whether this is an Automake generated Makefile or not.
- # We used to match only the files named `Makefile.in', but
- # some people rename them; so instead we look at the file content.
- # Grep'ing the first line is not enough: some people post-process
- # each Makefile.in and add a new line on top of each file to say so.
- # So let's grep whole file.
- if grep '^#.*generated by automake' $mf > /dev/null 2>&1; then
- dirpart=`AS_DIRNAME("$mf")`
- else
- continue
- fi
- grep '^DEP_FILES *= *[[^ @%:@]]' < "$mf" > /dev/null || continue
- # Extract the definition of DEP_FILES from the Makefile without
- # running `make'.
- DEPDIR=`sed -n -e '/^DEPDIR = / s///p' < "$mf"`
- test -z "$DEPDIR" && continue
- # When using ansi2knr, U may be empty or an underscore; expand it
- U=`sed -n -e '/^U = / s///p' < "$mf"`
- test -d "$dirpart/$DEPDIR" || mkdir "$dirpart/$DEPDIR"
- # We invoke sed twice because it is the simplest approach to
- # changing $(DEPDIR) to its actual value in the expansion.
- for file in `sed -n -e '
- /^DEP_FILES = .*\\\\$/ {
- s/^DEP_FILES = //
- :loop
- s/\\\\$//
- p
- n
- /\\\\$/ b loop
- p
- }
- /^DEP_FILES = / s/^DEP_FILES = //p' < "$mf" | \
- sed -e 's/\$(DEPDIR)/'"$DEPDIR"'/g' -e 's/\$U/'"$U"'/g'`; do
- # Make sure the directory exists.
- test -f "$dirpart/$file" && continue
- fdir=`AS_DIRNAME(["$file"])`
- AS_MKDIR_P([$dirpart/$fdir])
- # echo "creating $dirpart/$file"
- echo '# dummy' > "$dirpart/$file"
- done
-done
-])# _AM_OUTPUT_DEPENDENCY_COMMANDS
-
-
-# AM_OUTPUT_DEPENDENCY_COMMANDS
-# -----------------------------
-# This macro should only be invoked once -- use via AC_REQUIRE.
-#
-# This code is only required when automatic dependency tracking
-# is enabled. FIXME. This creates each `.P' file that we will
-# need in order to bootstrap the dependency handling code.
-AC_DEFUN([AM_OUTPUT_DEPENDENCY_COMMANDS],
-[AC_CONFIG_COMMANDS([depfiles],
- [test x"$AMDEP_TRUE" != x"" || _AM_OUTPUT_DEPENDENCY_COMMANDS],
- [AMDEP_TRUE="$AMDEP_TRUE" ac_aux_dir="$ac_aux_dir"])
-])
-
-# Check to see how 'make' treats includes. -*- Autoconf -*-
-
-# Copyright (C) 2001, 2002 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# serial 2
-
-# AM_MAKE_INCLUDE()
-# -----------------
-# Check to see how make treats includes.
-AC_DEFUN([AM_MAKE_INCLUDE],
-[am_make=${MAKE-make}
-cat > confinc << 'END'
-doit:
- @echo done
-END
-# If we don't find an include directive, just comment out the code.
-AC_MSG_CHECKING([for style of include used by $am_make])
-am__include="#"
-am__quote=
-_am_result=none
-# First try GNU make style include.
-echo "include confinc" > confmf
-# We grep out `Entering directory' and `Leaving directory'
-# messages which can occur if `w' ends up in MAKEFLAGS.
-# In particular we don't look at `^make:' because GNU make might
-# be invoked under some other name (usually "gmake"), in which
-# case it prints its new name instead of `make'.
-if test "`$am_make -s -f confmf 2> /dev/null | grep -v 'ing directory'`" = "done"; then
- am__include=include
- am__quote=
- _am_result=GNU
-fi
-# Now try BSD make style include.
-if test "$am__include" = "#"; then
- echo '.include "confinc"' > confmf
- if test "`$am_make -s -f confmf 2> /dev/null`" = "done"; then
- am__include=.include
- am__quote="\""
- _am_result=BSD
- fi
-fi
-AC_SUBST(am__include)
-AC_SUBST(am__quote)
-AC_MSG_RESULT($_am_result)
-rm -f confinc confmf
-])
-
-# AM_CONDITIONAL -*- Autoconf -*-
-
-# Copyright 1997, 2000, 2001 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# serial 5
-
-AC_PREREQ(2.52)
-
-# AM_CONDITIONAL(NAME, SHELL-CONDITION)
-# -------------------------------------
-# Define a conditional.
-AC_DEFUN([AM_CONDITIONAL],
-[ifelse([$1], [TRUE], [AC_FATAL([$0: invalid condition: $1])],
- [$1], [FALSE], [AC_FATAL([$0: invalid condition: $1])])dnl
-AC_SUBST([$1_TRUE])
-AC_SUBST([$1_FALSE])
-if $2; then
- $1_TRUE=
- $1_FALSE='#'
-else
- $1_TRUE='#'
- $1_FALSE=
-fi
-AC_CONFIG_COMMANDS_PRE(
-[if test -z "${$1_TRUE}" && test -z "${$1_FALSE}"; then
- AC_MSG_ERROR([conditional "$1" was never defined.
-Usually this means the macro was only invoked conditionally.])
-fi])])
-
-# Like AC_CONFIG_HEADER, but automatically create stamp file. -*- Autoconf -*-
-
-# Copyright 1996, 1997, 2000, 2001 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-AC_PREREQ([2.52])
-
-# serial 6
-
-# AM_CONFIG_HEADER is obsolete. It has been replaced by AC_CONFIG_HEADERS.
-AU_DEFUN([AM_CONFIG_HEADER], [AC_CONFIG_HEADERS($@)])
-
Deleted: trunk/packages/rnahybrid/trunk/config.h.in
===================================================================
--- trunk/packages/rnahybrid/trunk/config.h.in 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/config.h.in 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,71 +0,0 @@
-/* config.h.in. Generated from configure.in by autoheader. */
-
-/* Define to 1 if you have the <inttypes.h> header file. */
-#undef HAVE_INTTYPES_H
-
-/* Define to 1 if you have the `g2' library (-lg2). */
-#undef HAVE_LIBG2
-
-/* Define to 1 if you have the `gd' library (-lgd). */
-#undef HAVE_LIBGD
-
-/* Define to 1 if you have the `m' library (-lm). */
-#undef HAVE_LIBM
-
-/* Define to 1 if you have the <memory.h> header file. */
-#undef HAVE_MEMORY_H
-
-/* Define to 1 if you have the <stdint.h> header file. */
-#undef HAVE_STDINT_H
-
-/* Define to 1 if you have the <stdlib.h> header file. */
-#undef HAVE_STDLIB_H
-
-/* Define to 1 if you have the <strings.h> header file. */
-#undef HAVE_STRINGS_H
-
-/* Define to 1 if you have the <string.h> header file. */
-#undef HAVE_STRING_H
-
-/* Define to 1 if you have the <sys/stat.h> header file. */
-#undef HAVE_SYS_STAT_H
-
-/* Define to 1 if you have the <sys/types.h> header file. */
-#undef HAVE_SYS_TYPES_H
-
-/* Define to 1 if you have the <unistd.h> header file. */
-#undef HAVE_UNISTD_H
-
-/* Name of package */
-#undef PACKAGE
-
-/* Define to the address where bug reports for this package should be sent. */
-#undef PACKAGE_BUGREPORT
-
-/* Define to the full name of this package. */
-#undef PACKAGE_NAME
-
-/* Define to the full name and version of this package. */
-#undef PACKAGE_STRING
-
-/* Define to the one symbol short name of this package. */
-#undef PACKAGE_TARNAME
-
-/* Define to the version of this package. */
-#undef PACKAGE_VERSION
-
-/* Define to 1 if you have the ANSI C header files. */
-#undef STDC_HEADERS
-
-/* Version number of package */
-#undef VERSION
-
-/* Define to empty if `const' does not conform to ANSI C. */
-#undef const
-
-/* Define as `__inline' if that's what the C compiler calls it, or to nothing
- if it is not supported. */
-#undef inline
-
-/* Define to `unsigned' if <sys/types.h> does not define. */
-#undef size_t
Deleted: trunk/packages/rnahybrid/trunk/configure
===================================================================
--- trunk/packages/rnahybrid/trunk/configure 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/configure 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,5171 +0,0 @@
-#! /bin/sh
-# From configure.in Revision: 1.0 .
-# Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.57 for RNAhybrid 1.0.
-#
-# Report bugs to <marc at techfak.uni-bielefeld.de>.
-#
-# Copyright 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
-# This configure script is free software; the Free Software Foundation
-# gives unlimited permission to copy, distribute and modify it.
-## --------------------- ##
-## M4sh Initialization. ##
-## --------------------- ##
-
-# Be Bourne compatible
-if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
- emulate sh
- NULLCMD=:
- # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
- # is contrary to our usage. Disable this feature.
- alias -g '${1+"$@"}'='"$@"'
-elif test -n "${BASH_VERSION+set}" && (set -o posix) >/dev/null 2>&1; then
- set -o posix
-fi
-
-# Support unset when possible.
-if (FOO=FOO; unset FOO) >/dev/null 2>&1; then
- as_unset=unset
-else
- as_unset=false
-fi
-
-
-# Work around bugs in pre-3.0 UWIN ksh.
-$as_unset ENV MAIL MAILPATH
-PS1='$ '
-PS2='> '
-PS4='+ '
-
-# NLS nuisances.
-for as_var in \
- LANG LANGUAGE LC_ADDRESS LC_ALL LC_COLLATE LC_CTYPE LC_IDENTIFICATION \
- LC_MEASUREMENT LC_MESSAGES LC_MONETARY LC_NAME LC_NUMERIC LC_PAPER \
- LC_TELEPHONE LC_TIME
-do
- if (set +x; test -n "`(eval $as_var=C; export $as_var) 2>&1`"); then
- eval $as_var=C; export $as_var
- else
- $as_unset $as_var
- fi
-done
-
-# Required to use basename.
-if expr a : '\(a\)' >/dev/null 2>&1; then
- as_expr=expr
-else
- as_expr=false
-fi
-
-if (basename /) >/dev/null 2>&1 && test "X`basename / 2>&1`" = "X/"; then
- as_basename=basename
-else
- as_basename=false
-fi
-
-
-# Name of the executable.
-as_me=`$as_basename "$0" ||
-$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
- X"$0" : 'X\(//\)$' \| \
- X"$0" : 'X\(/\)$' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X/"$0" |
- sed '/^.*\/\([^/][^/]*\)\/*$/{ s//\1/; q; }
- /^X\/\(\/\/\)$/{ s//\1/; q; }
- /^X\/\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
-
-
-# PATH needs CR, and LINENO needs CR and PATH.
-# Avoid depending upon Character Ranges.
-as_cr_letters='abcdefghijklmnopqrstuvwxyz'
-as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
-as_cr_Letters=$as_cr_letters$as_cr_LETTERS
-as_cr_digits='0123456789'
-as_cr_alnum=$as_cr_Letters$as_cr_digits
-
-# The user is always right.
-if test "${PATH_SEPARATOR+set}" != set; then
- echo "#! /bin/sh" >conf$$.sh
- echo "exit 0" >>conf$$.sh
- chmod +x conf$$.sh
- if (PATH="/nonexistent;."; conf$$.sh) >/dev/null 2>&1; then
- PATH_SEPARATOR=';'
- else
- PATH_SEPARATOR=:
- fi
- rm -f conf$$.sh
-fi
-
-
- as_lineno_1=$LINENO
- as_lineno_2=$LINENO
- as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
- test "x$as_lineno_1" != "x$as_lineno_2" &&
- test "x$as_lineno_3" = "x$as_lineno_2" || {
- # Find who we are. Look in the path if we contain no path at all
- # relative or not.
- case $0 in
- *[\\/]* ) as_myself=$0 ;;
- *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
-done
-
- ;;
- esac
- # We did not find ourselves, most probably we were run as `sh COMMAND'
- # in which case we are not to be found in the path.
- if test "x$as_myself" = x; then
- as_myself=$0
- fi
- if test ! -f "$as_myself"; then
- { echo "$as_me: error: cannot find myself; rerun with an absolute path" >&2
- { (exit 1); exit 1; }; }
- fi
- case $CONFIG_SHELL in
- '')
- as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in /bin$PATH_SEPARATOR/usr/bin$PATH_SEPARATOR$PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for as_base in sh bash ksh sh5; do
- case $as_dir in
- /*)
- if ("$as_dir/$as_base" -c '
- as_lineno_1=$LINENO
- as_lineno_2=$LINENO
- as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
- test "x$as_lineno_1" != "x$as_lineno_2" &&
- test "x$as_lineno_3" = "x$as_lineno_2" ') 2>/dev/null; then
- $as_unset BASH_ENV || test "${BASH_ENV+set}" != set || { BASH_ENV=; export BASH_ENV; }
- $as_unset ENV || test "${ENV+set}" != set || { ENV=; export ENV; }
- CONFIG_SHELL=$as_dir/$as_base
- export CONFIG_SHELL
- exec "$CONFIG_SHELL" "$0" ${1+"$@"}
- fi;;
- esac
- done
-done
-;;
- esac
-
- # Create $as_me.lineno as a copy of $as_myself, but with $LINENO
- # uniformly replaced by the line number. The first 'sed' inserts a
- # line-number line before each line; the second 'sed' does the real
- # work. The second script uses 'N' to pair each line-number line
- # with the numbered line, and appends trailing '-' during
- # substitution so that $LINENO is not a special case at line end.
- # (Raja R Harinath suggested sed '=', and Paul Eggert wrote the
- # second 'sed' script. Blame Lee E. McMahon for sed's syntax. :-)
- sed '=' <$as_myself |
- sed '
- N
- s,$,-,
- : loop
- s,^\(['$as_cr_digits']*\)\(.*\)[$]LINENO\([^'$as_cr_alnum'_]\),\1\2\1\3,
- t loop
- s,-$,,
- s,^['$as_cr_digits']*\n,,
- ' >$as_me.lineno &&
- chmod +x $as_me.lineno ||
- { echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2
- { (exit 1); exit 1; }; }
-
- # Don't try to exec as it changes $[0], causing all sort of problems
- # (the dirname of $[0] is not the place where we might find the
- # original and so on. Autoconf is especially sensible to this).
- . ./$as_me.lineno
- # Exit status is that of the last command.
- exit
-}
-
-
-case `echo "testing\c"; echo 1,2,3`,`echo -n testing; echo 1,2,3` in
- *c*,-n*) ECHO_N= ECHO_C='
-' ECHO_T=' ' ;;
- *c*,* ) ECHO_N=-n ECHO_C= ECHO_T= ;;
- *) ECHO_N= ECHO_C='\c' ECHO_T= ;;
-esac
-
-if expr a : '\(a\)' >/dev/null 2>&1; then
- as_expr=expr
-else
- as_expr=false
-fi
-
-rm -f conf$$ conf$$.exe conf$$.file
-echo >conf$$.file
-if ln -s conf$$.file conf$$ 2>/dev/null; then
- # We could just check for DJGPP; but this test a) works b) is more generic
- # and c) will remain valid once DJGPP supports symlinks (DJGPP 2.04).
- if test -f conf$$.exe; then
- # Don't use ln at all; we don't have any links
- as_ln_s='cp -p'
- else
- as_ln_s='ln -s'
- fi
-elif ln conf$$.file conf$$ 2>/dev/null; then
- as_ln_s=ln
-else
- as_ln_s='cp -p'
-fi
-rm -f conf$$ conf$$.exe conf$$.file
-
-if mkdir -p . 2>/dev/null; then
- as_mkdir_p=:
-else
- as_mkdir_p=false
-fi
-
-as_executable_p="test -f"
-
-# Sed expression to map a string onto a valid CPP name.
-as_tr_cpp="sed y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g"
-
-# Sed expression to map a string onto a valid variable name.
-as_tr_sh="sed y%*+%pp%;s%[^_$as_cr_alnum]%_%g"
-
-
-# IFS
-# We need space, tab and new line, in precisely that order.
-as_nl='
-'
-IFS=" $as_nl"
-
-# CDPATH.
-$as_unset CDPATH
-
-
-# Name of the host.
-# hostname on some systems (SVR3.2, Linux) returns a bogus exit status,
-# so uname gets run too.
-ac_hostname=`(hostname || uname -n) 2>/dev/null | sed 1q`
-
-exec 6>&1
-
-#
-# Initializations.
-#
-ac_default_prefix=/usr/local
-ac_config_libobj_dir=.
-cross_compiling=no
-subdirs=
-MFLAGS=
-MAKEFLAGS=
-SHELL=${CONFIG_SHELL-/bin/sh}
-
-# Maximum number of lines to put in a shell here document.
-# This variable seems obsolete. It should probably be removed, and
-# only ac_max_sed_lines should be used.
-: ${ac_max_here_lines=38}
-
-# Identity of this package.
-PACKAGE_NAME='RNAhybrid'
-PACKAGE_TARNAME='RNAhybrid'
-PACKAGE_VERSION='1.0'
-PACKAGE_STRING='RNAhybrid 1.0'
-PACKAGE_BUGREPORT='marc at techfak.uni-bielefeld.de'
-
-# Factoring default headers for most tests.
-ac_includes_default="\
-#include <stdio.h>
-#if HAVE_SYS_TYPES_H
-# include <sys/types.h>
-#endif
-#if HAVE_SYS_STAT_H
-# include <sys/stat.h>
-#endif
-#if STDC_HEADERS
-# include <stdlib.h>
-# include <stddef.h>
-#else
-# if HAVE_STDLIB_H
-# include <stdlib.h>
-# endif
-#endif
-#if HAVE_STRING_H
-# if !STDC_HEADERS && HAVE_MEMORY_H
-# include <memory.h>
-# endif
-# include <string.h>
-#endif
-#if HAVE_STRINGS_H
-# include <strings.h>
-#endif
-#if HAVE_INTTYPES_H
-# include <inttypes.h>
-#else
-# if HAVE_STDINT_H
-# include <stdint.h>
-# endif
-#endif
-#if HAVE_UNISTD_H
-# include <unistd.h>
-#endif"
-
-ac_subst_vars='SHELL PATH_SEPARATOR PACKAGE_NAME PACKAGE_TARNAME PACKAGE_VERSION PACKAGE_STRING PACKAGE_BUGREPORT exec_prefix prefix program_transform_name bindir sbindir libexecdir datadir sysconfdir sharedstatedir localstatedir libdir includedir oldincludedir infodir mandir build_alias host_alias target_alias DEFS ECHO_C ECHO_N ECHO_T LIBS INSTALL_PROGRAM INSTALL_SCRIPT INSTALL_DATA CYGPATH_W PACKAGE VERSION ACLOCAL AUTOCONF AUTOMAKE AUTOHEADER MAKEINFO AMTAR install_sh STRIP ac_ct_STRIP INSTALL_STRIP_PROGRAM AWK SET_MAKE am__leading_dot CC CFLAGS LDFLAGS CPPFLAGS ac_ct_CC EXEEXT OBJEXT DEPDIR am__include am__quote AMDEP_TRUE AMDEP_FALSE AMDEPBACKSLASH CCDEPMODE am__fastdepCC_TRUE am__fastdepCC_FALSE CPP EGREP LIBOBJS LTLIBOBJS'
-ac_subst_files=''
-
-# Initialize some variables set by options.
-ac_init_help=
-ac_init_version=false
-# The variables have the same names as the options, with
-# dashes changed to underlines.
-cache_file=/dev/null
-exec_prefix=NONE
-no_create=
-no_recursion=
-prefix=NONE
-program_prefix=NONE
-program_suffix=NONE
-program_transform_name=s,x,x,
-silent=
-site=
-srcdir=
-verbose=
-x_includes=NONE
-x_libraries=NONE
-
-# Installation directory options.
-# These are left unexpanded so users can "make install exec_prefix=/foo"
-# and all the variables that are supposed to be based on exec_prefix
-# by default will actually change.
-# Use braces instead of parens because sh, perl, etc. also accept them.
-bindir='${exec_prefix}/bin'
-sbindir='${exec_prefix}/sbin'
-libexecdir='${exec_prefix}/libexec'
-datadir='${prefix}/share'
-sysconfdir='${prefix}/etc'
-sharedstatedir='${prefix}/com'
-localstatedir='${prefix}/var'
-libdir='${exec_prefix}/lib'
-includedir='${prefix}/include'
-oldincludedir='/usr/include'
-infodir='${prefix}/info'
-mandir='${prefix}/man'
-
-ac_prev=
-for ac_option
-do
- # If the previous option needs an argument, assign it.
- if test -n "$ac_prev"; then
- eval "$ac_prev=\$ac_option"
- ac_prev=
- continue
- fi
-
- ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
-
- # Accept the important Cygnus configure options, so we can diagnose typos.
-
- case $ac_option in
-
- -bindir | --bindir | --bindi | --bind | --bin | --bi)
- ac_prev=bindir ;;
- -bindir=* | --bindir=* | --bindi=* | --bind=* | --bin=* | --bi=*)
- bindir=$ac_optarg ;;
-
- -build | --build | --buil | --bui | --bu)
- ac_prev=build_alias ;;
- -build=* | --build=* | --buil=* | --bui=* | --bu=*)
- build_alias=$ac_optarg ;;
-
- -cache-file | --cache-file | --cache-fil | --cache-fi \
- | --cache-f | --cache- | --cache | --cach | --cac | --ca | --c)
- ac_prev=cache_file ;;
- -cache-file=* | --cache-file=* | --cache-fil=* | --cache-fi=* \
- | --cache-f=* | --cache-=* | --cache=* | --cach=* | --cac=* | --ca=* | --c=*)
- cache_file=$ac_optarg ;;
-
- --config-cache | -C)
- cache_file=config.cache ;;
-
- -datadir | --datadir | --datadi | --datad | --data | --dat | --da)
- ac_prev=datadir ;;
- -datadir=* | --datadir=* | --datadi=* | --datad=* | --data=* | --dat=* \
- | --da=*)
- datadir=$ac_optarg ;;
-
- -disable-* | --disable-*)
- ac_feature=`expr "x$ac_option" : 'x-*disable-\(.*\)'`
- # Reject names that are not valid shell variable names.
- expr "x$ac_feature" : ".*[^-_$as_cr_alnum]" >/dev/null &&
- { echo "$as_me: error: invalid feature name: $ac_feature" >&2
- { (exit 1); exit 1; }; }
- ac_feature=`echo $ac_feature | sed 's/-/_/g'`
- eval "enable_$ac_feature=no" ;;
-
- -enable-* | --enable-*)
- ac_feature=`expr "x$ac_option" : 'x-*enable-\([^=]*\)'`
- # Reject names that are not valid shell variable names.
- expr "x$ac_feature" : ".*[^-_$as_cr_alnum]" >/dev/null &&
- { echo "$as_me: error: invalid feature name: $ac_feature" >&2
- { (exit 1); exit 1; }; }
- ac_feature=`echo $ac_feature | sed 's/-/_/g'`
- case $ac_option in
- *=*) ac_optarg=`echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"`;;
- *) ac_optarg=yes ;;
- esac
- eval "enable_$ac_feature='$ac_optarg'" ;;
-
- -exec-prefix | --exec_prefix | --exec-prefix | --exec-prefi \
- | --exec-pref | --exec-pre | --exec-pr | --exec-p | --exec- \
- | --exec | --exe | --ex)
- ac_prev=exec_prefix ;;
- -exec-prefix=* | --exec_prefix=* | --exec-prefix=* | --exec-prefi=* \
- | --exec-pref=* | --exec-pre=* | --exec-pr=* | --exec-p=* | --exec-=* \
- | --exec=* | --exe=* | --ex=*)
- exec_prefix=$ac_optarg ;;
-
- -gas | --gas | --ga | --g)
- # Obsolete; use --with-gas.
- with_gas=yes ;;
-
- -help | --help | --hel | --he | -h)
- ac_init_help=long ;;
- -help=r* | --help=r* | --hel=r* | --he=r* | -hr*)
- ac_init_help=recursive ;;
- -help=s* | --help=s* | --hel=s* | --he=s* | -hs*)
- ac_init_help=short ;;
-
- -host | --host | --hos | --ho)
- ac_prev=host_alias ;;
- -host=* | --host=* | --hos=* | --ho=*)
- host_alias=$ac_optarg ;;
-
- -includedir | --includedir | --includedi | --included | --include \
- | --includ | --inclu | --incl | --inc)
- ac_prev=includedir ;;
- -includedir=* | --includedir=* | --includedi=* | --included=* | --include=* \
- | --includ=* | --inclu=* | --incl=* | --inc=*)
- includedir=$ac_optarg ;;
-
- -infodir | --infodir | --infodi | --infod | --info | --inf)
- ac_prev=infodir ;;
- -infodir=* | --infodir=* | --infodi=* | --infod=* | --info=* | --inf=*)
- infodir=$ac_optarg ;;
-
- -libdir | --libdir | --libdi | --libd)
- ac_prev=libdir ;;
- -libdir=* | --libdir=* | --libdi=* | --libd=*)
- libdir=$ac_optarg ;;
-
- -libexecdir | --libexecdir | --libexecdi | --libexecd | --libexec \
- | --libexe | --libex | --libe)
- ac_prev=libexecdir ;;
- -libexecdir=* | --libexecdir=* | --libexecdi=* | --libexecd=* | --libexec=* \
- | --libexe=* | --libex=* | --libe=*)
- libexecdir=$ac_optarg ;;
-
- -localstatedir | --localstatedir | --localstatedi | --localstated \
- | --localstate | --localstat | --localsta | --localst \
- | --locals | --local | --loca | --loc | --lo)
- ac_prev=localstatedir ;;
- -localstatedir=* | --localstatedir=* | --localstatedi=* | --localstated=* \
- | --localstate=* | --localstat=* | --localsta=* | --localst=* \
- | --locals=* | --local=* | --loca=* | --loc=* | --lo=*)
- localstatedir=$ac_optarg ;;
-
- -mandir | --mandir | --mandi | --mand | --man | --ma | --m)
- ac_prev=mandir ;;
- -mandir=* | --mandir=* | --mandi=* | --mand=* | --man=* | --ma=* | --m=*)
- mandir=$ac_optarg ;;
-
- -nfp | --nfp | --nf)
- # Obsolete; use --without-fp.
- with_fp=no ;;
-
- -no-create | --no-create | --no-creat | --no-crea | --no-cre \
- | --no-cr | --no-c | -n)
- no_create=yes ;;
-
- -no-recursion | --no-recursion | --no-recursio | --no-recursi \
- | --no-recurs | --no-recur | --no-recu | --no-rec | --no-re | --no-r)
- no_recursion=yes ;;
-
- -oldincludedir | --oldincludedir | --oldincludedi | --oldincluded \
- | --oldinclude | --oldinclud | --oldinclu | --oldincl | --oldinc \
- | --oldin | --oldi | --old | --ol | --o)
- ac_prev=oldincludedir ;;
- -oldincludedir=* | --oldincludedir=* | --oldincludedi=* | --oldincluded=* \
- | --oldinclude=* | --oldinclud=* | --oldinclu=* | --oldincl=* | --oldinc=* \
- | --oldin=* | --oldi=* | --old=* | --ol=* | --o=*)
- oldincludedir=$ac_optarg ;;
-
- -prefix | --prefix | --prefi | --pref | --pre | --pr | --p)
- ac_prev=prefix ;;
- -prefix=* | --prefix=* | --prefi=* | --pref=* | --pre=* | --pr=* | --p=*)
- prefix=$ac_optarg ;;
-
- -program-prefix | --program-prefix | --program-prefi | --program-pref \
- | --program-pre | --program-pr | --program-p)
- ac_prev=program_prefix ;;
- -program-prefix=* | --program-prefix=* | --program-prefi=* \
- | --program-pref=* | --program-pre=* | --program-pr=* | --program-p=*)
- program_prefix=$ac_optarg ;;
-
- -program-suffix | --program-suffix | --program-suffi | --program-suff \
- | --program-suf | --program-su | --program-s)
- ac_prev=program_suffix ;;
- -program-suffix=* | --program-suffix=* | --program-suffi=* \
- | --program-suff=* | --program-suf=* | --program-su=* | --program-s=*)
- program_suffix=$ac_optarg ;;
-
- -program-transform-name | --program-transform-name \
- | --program-transform-nam | --program-transform-na \
- | --program-transform-n | --program-transform- \
- | --program-transform | --program-transfor \
- | --program-transfo | --program-transf \
- | --program-trans | --program-tran \
- | --progr-tra | --program-tr | --program-t)
- ac_prev=program_transform_name ;;
- -program-transform-name=* | --program-transform-name=* \
- | --program-transform-nam=* | --program-transform-na=* \
- | --program-transform-n=* | --program-transform-=* \
- | --program-transform=* | --program-transfor=* \
- | --program-transfo=* | --program-transf=* \
- | --program-trans=* | --program-tran=* \
- | --progr-tra=* | --program-tr=* | --program-t=*)
- program_transform_name=$ac_optarg ;;
-
- -q | -quiet | --quiet | --quie | --qui | --qu | --q \
- | -silent | --silent | --silen | --sile | --sil)
- silent=yes ;;
-
- -sbindir | --sbindir | --sbindi | --sbind | --sbin | --sbi | --sb)
- ac_prev=sbindir ;;
- -sbindir=* | --sbindir=* | --sbindi=* | --sbind=* | --sbin=* \
- | --sbi=* | --sb=*)
- sbindir=$ac_optarg ;;
-
- -sharedstatedir | --sharedstatedir | --sharedstatedi \
- | --sharedstated | --sharedstate | --sharedstat | --sharedsta \
- | --sharedst | --shareds | --shared | --share | --shar \
- | --sha | --sh)
- ac_prev=sharedstatedir ;;
- -sharedstatedir=* | --sharedstatedir=* | --sharedstatedi=* \
- | --sharedstated=* | --sharedstate=* | --sharedstat=* | --sharedsta=* \
- | --sharedst=* | --shareds=* | --shared=* | --share=* | --shar=* \
- | --sha=* | --sh=*)
- sharedstatedir=$ac_optarg ;;
-
- -site | --site | --sit)
- ac_prev=site ;;
- -site=* | --site=* | --sit=*)
- site=$ac_optarg ;;
-
- -srcdir | --srcdir | --srcdi | --srcd | --src | --sr)
- ac_prev=srcdir ;;
- -srcdir=* | --srcdir=* | --srcdi=* | --srcd=* | --src=* | --sr=*)
- srcdir=$ac_optarg ;;
-
- -sysconfdir | --sysconfdir | --sysconfdi | --sysconfd | --sysconf \
- | --syscon | --sysco | --sysc | --sys | --sy)
- ac_prev=sysconfdir ;;
- -sysconfdir=* | --sysconfdir=* | --sysconfdi=* | --sysconfd=* | --sysconf=* \
- | --syscon=* | --sysco=* | --sysc=* | --sys=* | --sy=*)
- sysconfdir=$ac_optarg ;;
-
- -target | --target | --targe | --targ | --tar | --ta | --t)
- ac_prev=target_alias ;;
- -target=* | --target=* | --targe=* | --targ=* | --tar=* | --ta=* | --t=*)
- target_alias=$ac_optarg ;;
-
- -v | -verbose | --verbose | --verbos | --verbo | --verb)
- verbose=yes ;;
-
- -version | --version | --versio | --versi | --vers | -V)
- ac_init_version=: ;;
-
- -with-* | --with-*)
- ac_package=`expr "x$ac_option" : 'x-*with-\([^=]*\)'`
- # Reject names that are not valid shell variable names.
- expr "x$ac_package" : ".*[^-_$as_cr_alnum]" >/dev/null &&
- { echo "$as_me: error: invalid package name: $ac_package" >&2
- { (exit 1); exit 1; }; }
- ac_package=`echo $ac_package| sed 's/-/_/g'`
- case $ac_option in
- *=*) ac_optarg=`echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"`;;
- *) ac_optarg=yes ;;
- esac
- eval "with_$ac_package='$ac_optarg'" ;;
-
- -without-* | --without-*)
- ac_package=`expr "x$ac_option" : 'x-*without-\(.*\)'`
- # Reject names that are not valid shell variable names.
- expr "x$ac_package" : ".*[^-_$as_cr_alnum]" >/dev/null &&
- { echo "$as_me: error: invalid package name: $ac_package" >&2
- { (exit 1); exit 1; }; }
- ac_package=`echo $ac_package | sed 's/-/_/g'`
- eval "with_$ac_package=no" ;;
-
- --x)
- # Obsolete; use --with-x.
- with_x=yes ;;
-
- -x-includes | --x-includes | --x-include | --x-includ | --x-inclu \
- | --x-incl | --x-inc | --x-in | --x-i)
- ac_prev=x_includes ;;
- -x-includes=* | --x-includes=* | --x-include=* | --x-includ=* | --x-inclu=* \
- | --x-incl=* | --x-inc=* | --x-in=* | --x-i=*)
- x_includes=$ac_optarg ;;
-
- -x-libraries | --x-libraries | --x-librarie | --x-librari \
- | --x-librar | --x-libra | --x-libr | --x-lib | --x-li | --x-l)
- ac_prev=x_libraries ;;
- -x-libraries=* | --x-libraries=* | --x-librarie=* | --x-librari=* \
- | --x-librar=* | --x-libra=* | --x-libr=* | --x-lib=* | --x-li=* | --x-l=*)
- x_libraries=$ac_optarg ;;
-
- -*) { echo "$as_me: error: unrecognized option: $ac_option
-Try \`$0 --help' for more information." >&2
- { (exit 1); exit 1; }; }
- ;;
-
- *=*)
- ac_envvar=`expr "x$ac_option" : 'x\([^=]*\)='`
- # Reject names that are not valid shell variable names.
- expr "x$ac_envvar" : ".*[^_$as_cr_alnum]" >/dev/null &&
- { echo "$as_me: error: invalid variable name: $ac_envvar" >&2
- { (exit 1); exit 1; }; }
- ac_optarg=`echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"`
- eval "$ac_envvar='$ac_optarg'"
- export $ac_envvar ;;
-
- *)
- # FIXME: should be removed in autoconf 3.0.
- echo "$as_me: WARNING: you should use --build, --host, --target" >&2
- expr "x$ac_option" : ".*[^-._$as_cr_alnum]" >/dev/null &&
- echo "$as_me: WARNING: invalid host type: $ac_option" >&2
- : ${build_alias=$ac_option} ${host_alias=$ac_option} ${target_alias=$ac_option}
- ;;
-
- esac
-done
-
-if test -n "$ac_prev"; then
- ac_option=--`echo $ac_prev | sed 's/_/-/g'`
- { echo "$as_me: error: missing argument to $ac_option" >&2
- { (exit 1); exit 1; }; }
-fi
-
-# Be sure to have absolute paths.
-for ac_var in exec_prefix prefix
-do
- eval ac_val=$`echo $ac_var`
- case $ac_val in
- [\\/$]* | ?:[\\/]* | NONE | '' ) ;;
- *) { echo "$as_me: error: expected an absolute directory name for --$ac_var: $ac_val" >&2
- { (exit 1); exit 1; }; };;
- esac
-done
-
-# Be sure to have absolute paths.
-for ac_var in bindir sbindir libexecdir datadir sysconfdir sharedstatedir \
- localstatedir libdir includedir oldincludedir infodir mandir
-do
- eval ac_val=$`echo $ac_var`
- case $ac_val in
- [\\/$]* | ?:[\\/]* ) ;;
- *) { echo "$as_me: error: expected an absolute directory name for --$ac_var: $ac_val" >&2
- { (exit 1); exit 1; }; };;
- esac
-done
-
-# There might be people who depend on the old broken behavior: `$host'
-# used to hold the argument of --host etc.
-# FIXME: To remove some day.
-build=$build_alias
-host=$host_alias
-target=$target_alias
-
-# FIXME: To remove some day.
-if test "x$host_alias" != x; then
- if test "x$build_alias" = x; then
- cross_compiling=maybe
- echo "$as_me: WARNING: If you wanted to set the --build type, don't use --host.
- If a cross compiler is detected then cross compile mode will be used." >&2
- elif test "x$build_alias" != "x$host_alias"; then
- cross_compiling=yes
- fi
-fi
-
-ac_tool_prefix=
-test -n "$host_alias" && ac_tool_prefix=$host_alias-
-
-test "$silent" = yes && exec 6>/dev/null
-
-
-# Find the source files, if location was not specified.
-if test -z "$srcdir"; then
- ac_srcdir_defaulted=yes
- # Try the directory containing this script, then its parent.
- ac_confdir=`(dirname "$0") 2>/dev/null ||
-$as_expr X"$0" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$0" : 'X\(//\)[^/]' \| \
- X"$0" : 'X\(//\)$' \| \
- X"$0" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$0" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- srcdir=$ac_confdir
- if test ! -r $srcdir/$ac_unique_file; then
- srcdir=..
- fi
-else
- ac_srcdir_defaulted=no
-fi
-if test ! -r $srcdir/$ac_unique_file; then
- if test "$ac_srcdir_defaulted" = yes; then
- { echo "$as_me: error: cannot find sources ($ac_unique_file) in $ac_confdir or .." >&2
- { (exit 1); exit 1; }; }
- else
- { echo "$as_me: error: cannot find sources ($ac_unique_file) in $srcdir" >&2
- { (exit 1); exit 1; }; }
- fi
-fi
-(cd $srcdir && test -r ./$ac_unique_file) 2>/dev/null ||
- { echo "$as_me: error: sources are in $srcdir, but \`cd $srcdir' does not work" >&2
- { (exit 1); exit 1; }; }
-srcdir=`echo "$srcdir" | sed 's%\([^\\/]\)[\\/]*$%\1%'`
-ac_env_build_alias_set=${build_alias+set}
-ac_env_build_alias_value=$build_alias
-ac_cv_env_build_alias_set=${build_alias+set}
-ac_cv_env_build_alias_value=$build_alias
-ac_env_host_alias_set=${host_alias+set}
-ac_env_host_alias_value=$host_alias
-ac_cv_env_host_alias_set=${host_alias+set}
-ac_cv_env_host_alias_value=$host_alias
-ac_env_target_alias_set=${target_alias+set}
-ac_env_target_alias_value=$target_alias
-ac_cv_env_target_alias_set=${target_alias+set}
-ac_cv_env_target_alias_value=$target_alias
-ac_env_CC_set=${CC+set}
-ac_env_CC_value=$CC
-ac_cv_env_CC_set=${CC+set}
-ac_cv_env_CC_value=$CC
-ac_env_CFLAGS_set=${CFLAGS+set}
-ac_env_CFLAGS_value=$CFLAGS
-ac_cv_env_CFLAGS_set=${CFLAGS+set}
-ac_cv_env_CFLAGS_value=$CFLAGS
-ac_env_LDFLAGS_set=${LDFLAGS+set}
-ac_env_LDFLAGS_value=$LDFLAGS
-ac_cv_env_LDFLAGS_set=${LDFLAGS+set}
-ac_cv_env_LDFLAGS_value=$LDFLAGS
-ac_env_CPPFLAGS_set=${CPPFLAGS+set}
-ac_env_CPPFLAGS_value=$CPPFLAGS
-ac_cv_env_CPPFLAGS_set=${CPPFLAGS+set}
-ac_cv_env_CPPFLAGS_value=$CPPFLAGS
-ac_env_CPP_set=${CPP+set}
-ac_env_CPP_value=$CPP
-ac_cv_env_CPP_set=${CPP+set}
-ac_cv_env_CPP_value=$CPP
-
-#
-# Report the --help message.
-#
-if test "$ac_init_help" = "long"; then
- # Omit some internal or obsolete options to make the list less imposing.
- # This message is too long to be a string in the A/UX 3.1 sh.
- cat <<_ACEOF
-\`configure' configures RNAhybrid 1.0 to adapt to many kinds of systems.
-
-Usage: $0 [OPTION]... [VAR=VALUE]...
-
-To assign environment variables (e.g., CC, CFLAGS...), specify them as
-VAR=VALUE. See below for descriptions of some of the useful variables.
-
-Defaults for the options are specified in brackets.
-
-Configuration:
- -h, --help display this help and exit
- --help=short display options specific to this package
- --help=recursive display the short help of all the included packages
- -V, --version display version information and exit
- -q, --quiet, --silent do not print \`checking...' messages
- --cache-file=FILE cache test results in FILE [disabled]
- -C, --config-cache alias for \`--cache-file=config.cache'
- -n, --no-create do not create output files
- --srcdir=DIR find the sources in DIR [configure dir or \`..']
-
-_ACEOF
-
- cat <<_ACEOF
-Installation directories:
- --prefix=PREFIX install architecture-independent files in PREFIX
- [$ac_default_prefix]
- --exec-prefix=EPREFIX install architecture-dependent files in EPREFIX
- [PREFIX]
-
-By default, \`make install' will install all the files in
-\`$ac_default_prefix/bin', \`$ac_default_prefix/lib' etc. You can specify
-an installation prefix other than \`$ac_default_prefix' using \`--prefix',
-for instance \`--prefix=\$HOME'.
-
-For better control, use the options below.
-
-Fine tuning of the installation directories:
- --bindir=DIR user executables [EPREFIX/bin]
- --sbindir=DIR system admin executables [EPREFIX/sbin]
- --libexecdir=DIR program executables [EPREFIX/libexec]
- --datadir=DIR read-only architecture-independent data [PREFIX/share]
- --sysconfdir=DIR read-only single-machine data [PREFIX/etc]
- --sharedstatedir=DIR modifiable architecture-independent data [PREFIX/com]
- --localstatedir=DIR modifiable single-machine data [PREFIX/var]
- --libdir=DIR object code libraries [EPREFIX/lib]
- --includedir=DIR C header files [PREFIX/include]
- --oldincludedir=DIR C header files for non-gcc [/usr/include]
- --infodir=DIR info documentation [PREFIX/info]
- --mandir=DIR man documentation [PREFIX/man]
-_ACEOF
-
- cat <<\_ACEOF
-
-Program names:
- --program-prefix=PREFIX prepend PREFIX to installed program names
- --program-suffix=SUFFIX append SUFFIX to installed program names
- --program-transform-name=PROGRAM run sed PROGRAM on installed program names
-_ACEOF
-fi
-
-if test -n "$ac_init_help"; then
- case $ac_init_help in
- short | recursive ) echo "Configuration of RNAhybrid 1.0:";;
- esac
- cat <<\_ACEOF
-
-Optional Features:
- --disable-FEATURE do not include FEATURE (same as --enable-FEATURE=no)
- --enable-FEATURE[=ARG] include FEATURE [ARG=yes]
- --disable-dependency-tracking Speeds up one-time builds
- --enable-dependency-tracking Do not reject slow dependency extractors
-
-Some influential environment variables:
- CC C compiler command
- CFLAGS C compiler flags
- LDFLAGS linker flags, e.g. -L<lib dir> if you have libraries in a
- nonstandard directory <lib dir>
- CPPFLAGS C/C++ preprocessor flags, e.g. -I<include dir> if you have
- headers in a nonstandard directory <include dir>
- CPP C preprocessor
-
-Use these variables to override the choices made by `configure' or to help
-it to find libraries and programs with nonstandard names/locations.
-
-Report bugs to <marc at techfak.uni-bielefeld.de>.
-_ACEOF
-fi
-
-if test "$ac_init_help" = "recursive"; then
- # If there are subdirs, report their specific --help.
- ac_popdir=`pwd`
- for ac_dir in : $ac_subdirs_all; do test "x$ac_dir" = x: && continue
- test -d $ac_dir || continue
- ac_builddir=.
-
-if test "$ac_dir" != .; then
- ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
- # A "../" for each directory in $ac_dir_suffix.
- ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
-else
- ac_dir_suffix= ac_top_builddir=
-fi
-
-case $srcdir in
- .) # No --srcdir option. We are building in place.
- ac_srcdir=.
- if test -z "$ac_top_builddir"; then
- ac_top_srcdir=.
- else
- ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
- fi ;;
- [\\/]* | ?:[\\/]* ) # Absolute path.
- ac_srcdir=$srcdir$ac_dir_suffix;
- ac_top_srcdir=$srcdir ;;
- *) # Relative path.
- ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
- ac_top_srcdir=$ac_top_builddir$srcdir ;;
-esac
-# Don't blindly perform a `cd "$ac_dir"/$ac_foo && pwd` since $ac_foo can be
-# absolute.
-ac_abs_builddir=`cd "$ac_dir" && cd $ac_builddir && pwd`
-ac_abs_top_builddir=`cd "$ac_dir" && cd ${ac_top_builddir}. && pwd`
-ac_abs_srcdir=`cd "$ac_dir" && cd $ac_srcdir && pwd`
-ac_abs_top_srcdir=`cd "$ac_dir" && cd $ac_top_srcdir && pwd`
-
- cd $ac_dir
- # Check for guested configure; otherwise get Cygnus style configure.
- if test -f $ac_srcdir/configure.gnu; then
- echo
- $SHELL $ac_srcdir/configure.gnu --help=recursive
- elif test -f $ac_srcdir/configure; then
- echo
- $SHELL $ac_srcdir/configure --help=recursive
- elif test -f $ac_srcdir/configure.ac ||
- test -f $ac_srcdir/configure.in; then
- echo
- $ac_configure --help
- else
- echo "$as_me: WARNING: no configuration information is in $ac_dir" >&2
- fi
- cd $ac_popdir
- done
-fi
-
-test -n "$ac_init_help" && exit 0
-if $ac_init_version; then
- cat <<\_ACEOF
-RNAhybrid configure 1.0
-generated by GNU Autoconf 2.57
-
-Copyright 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001, 2002
-Free Software Foundation, Inc.
-This configure script is free software; the Free Software Foundation
-gives unlimited permission to copy, distribute and modify it.
-_ACEOF
- exit 0
-fi
-exec 5>config.log
-cat >&5 <<_ACEOF
-This file contains any messages produced by compilers while
-running configure, to aid debugging if configure makes a mistake.
-
-It was created by RNAhybrid $as_me 1.0, which was
-generated by GNU Autoconf 2.57. Invocation command line was
-
- $ $0 $@
-
-_ACEOF
-{
-cat <<_ASUNAME
-## --------- ##
-## Platform. ##
-## --------- ##
-
-hostname = `(hostname || uname -n) 2>/dev/null | sed 1q`
-uname -m = `(uname -m) 2>/dev/null || echo unknown`
-uname -r = `(uname -r) 2>/dev/null || echo unknown`
-uname -s = `(uname -s) 2>/dev/null || echo unknown`
-uname -v = `(uname -v) 2>/dev/null || echo unknown`
-
-/usr/bin/uname -p = `(/usr/bin/uname -p) 2>/dev/null || echo unknown`
-/bin/uname -X = `(/bin/uname -X) 2>/dev/null || echo unknown`
-
-/bin/arch = `(/bin/arch) 2>/dev/null || echo unknown`
-/usr/bin/arch -k = `(/usr/bin/arch -k) 2>/dev/null || echo unknown`
-/usr/convex/getsysinfo = `(/usr/convex/getsysinfo) 2>/dev/null || echo unknown`
-hostinfo = `(hostinfo) 2>/dev/null || echo unknown`
-/bin/machine = `(/bin/machine) 2>/dev/null || echo unknown`
-/usr/bin/oslevel = `(/usr/bin/oslevel) 2>/dev/null || echo unknown`
-/bin/universe = `(/bin/universe) 2>/dev/null || echo unknown`
-
-_ASUNAME
-
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- echo "PATH: $as_dir"
-done
-
-} >&5
-
-cat >&5 <<_ACEOF
-
-
-## ----------- ##
-## Core tests. ##
-## ----------- ##
-
-_ACEOF
-
-
-# Keep a trace of the command line.
-# Strip out --no-create and --no-recursion so they do not pile up.
-# Strip out --silent because we don't want to record it for future runs.
-# Also quote any args containing shell meta-characters.
-# Make two passes to allow for proper duplicate-argument suppression.
-ac_configure_args=
-ac_configure_args0=
-ac_configure_args1=
-ac_sep=
-ac_must_keep_next=false
-for ac_pass in 1 2
-do
- for ac_arg
- do
- case $ac_arg in
- -no-create | --no-c* | -n | -no-recursion | --no-r*) continue ;;
- -q | -quiet | --quiet | --quie | --qui | --qu | --q \
- | -silent | --silent | --silen | --sile | --sil)
- continue ;;
- *" "*|*" "*|*[\[\]\~\#\$\^\&\*\(\)\{\}\\\|\;\<\>\?\"\']*)
- ac_arg=`echo "$ac_arg" | sed "s/'/'\\\\\\\\''/g"` ;;
- esac
- case $ac_pass in
- 1) ac_configure_args0="$ac_configure_args0 '$ac_arg'" ;;
- 2)
- ac_configure_args1="$ac_configure_args1 '$ac_arg'"
- if test $ac_must_keep_next = true; then
- ac_must_keep_next=false # Got value, back to normal.
- else
- case $ac_arg in
- *=* | --config-cache | -C | -disable-* | --disable-* \
- | -enable-* | --enable-* | -gas | --g* | -nfp | --nf* \
- | -q | -quiet | --q* | -silent | --sil* | -v | -verb* \
- | -with-* | --with-* | -without-* | --without-* | --x)
- case "$ac_configure_args0 " in
- "$ac_configure_args1"*" '$ac_arg' "* ) continue ;;
- esac
- ;;
- -* ) ac_must_keep_next=true ;;
- esac
- fi
- ac_configure_args="$ac_configure_args$ac_sep'$ac_arg'"
- # Get rid of the leading space.
- ac_sep=" "
- ;;
- esac
- done
-done
-$as_unset ac_configure_args0 || test "${ac_configure_args0+set}" != set || { ac_configure_args0=; export ac_configure_args0; }
-$as_unset ac_configure_args1 || test "${ac_configure_args1+set}" != set || { ac_configure_args1=; export ac_configure_args1; }
-
-# When interrupted or exit'd, cleanup temporary files, and complete
-# config.log. We remove comments because anyway the quotes in there
-# would cause problems or look ugly.
-# WARNING: Be sure not to use single quotes in there, as some shells,
-# such as our DU 5.0 friend, will then `close' the trap.
-trap 'exit_status=$?
- # Save into config.log some information that might help in debugging.
- {
- echo
-
- cat <<\_ASBOX
-## ---------------- ##
-## Cache variables. ##
-## ---------------- ##
-_ASBOX
- echo
- # The following way of writing the cache mishandles newlines in values,
-{
- (set) 2>&1 |
- case `(ac_space='"'"' '"'"'; set | grep ac_space) 2>&1` in
- *ac_space=\ *)
- sed -n \
- "s/'"'"'/'"'"'\\\\'"'"''"'"'/g;
- s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='"'"'\\2'"'"'/p"
- ;;
- *)
- sed -n \
- "s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1=\\2/p"
- ;;
- esac;
-}
- echo
-
- cat <<\_ASBOX
-## ----------------- ##
-## Output variables. ##
-## ----------------- ##
-_ASBOX
- echo
- for ac_var in $ac_subst_vars
- do
- eval ac_val=$`echo $ac_var`
- echo "$ac_var='"'"'$ac_val'"'"'"
- done | sort
- echo
-
- if test -n "$ac_subst_files"; then
- cat <<\_ASBOX
-## ------------- ##
-## Output files. ##
-## ------------- ##
-_ASBOX
- echo
- for ac_var in $ac_subst_files
- do
- eval ac_val=$`echo $ac_var`
- echo "$ac_var='"'"'$ac_val'"'"'"
- done | sort
- echo
- fi
-
- if test -s confdefs.h; then
- cat <<\_ASBOX
-## ----------- ##
-## confdefs.h. ##
-## ----------- ##
-_ASBOX
- echo
- sed "/^$/d" confdefs.h | sort
- echo
- fi
- test "$ac_signal" != 0 &&
- echo "$as_me: caught signal $ac_signal"
- echo "$as_me: exit $exit_status"
- } >&5
- rm -f core core.* *.core &&
- rm -rf conftest* confdefs* conf$$* $ac_clean_files &&
- exit $exit_status
- ' 0
-for ac_signal in 1 2 13 15; do
- trap 'ac_signal='$ac_signal'; { (exit 1); exit 1; }' $ac_signal
-done
-ac_signal=0
-
-# confdefs.h avoids OS command line length limits that DEFS can exceed.
-rm -rf conftest* confdefs.h
-# AIX cpp loses on an empty file, so make sure it contains at least a newline.
-echo >confdefs.h
-
-# Predefined preprocessor variables.
-
-cat >>confdefs.h <<_ACEOF
-#define PACKAGE_NAME "$PACKAGE_NAME"
-_ACEOF
-
-
-cat >>confdefs.h <<_ACEOF
-#define PACKAGE_TARNAME "$PACKAGE_TARNAME"
-_ACEOF
-
-
-cat >>confdefs.h <<_ACEOF
-#define PACKAGE_VERSION "$PACKAGE_VERSION"
-_ACEOF
-
-
-cat >>confdefs.h <<_ACEOF
-#define PACKAGE_STRING "$PACKAGE_STRING"
-_ACEOF
-
-
-cat >>confdefs.h <<_ACEOF
-#define PACKAGE_BUGREPORT "$PACKAGE_BUGREPORT"
-_ACEOF
-
-
-# Let the site file select an alternate cache file if it wants to.
-# Prefer explicitly selected file to automatically selected ones.
-if test -z "$CONFIG_SITE"; then
- if test "x$prefix" != xNONE; then
- CONFIG_SITE="$prefix/share/config.site $prefix/etc/config.site"
- else
- CONFIG_SITE="$ac_default_prefix/share/config.site $ac_default_prefix/etc/config.site"
- fi
-fi
-for ac_site_file in $CONFIG_SITE; do
- if test -r "$ac_site_file"; then
- { echo "$as_me:$LINENO: loading site script $ac_site_file" >&5
-echo "$as_me: loading site script $ac_site_file" >&6;}
- sed 's/^/| /' "$ac_site_file" >&5
- . "$ac_site_file"
- fi
-done
-
-if test -r "$cache_file"; then
- # Some versions of bash will fail to source /dev/null (special
- # files actually), so we avoid doing that.
- if test -f "$cache_file"; then
- { echo "$as_me:$LINENO: loading cache $cache_file" >&5
-echo "$as_me: loading cache $cache_file" >&6;}
- case $cache_file in
- [\\/]* | ?:[\\/]* ) . $cache_file;;
- *) . ./$cache_file;;
- esac
- fi
-else
- { echo "$as_me:$LINENO: creating cache $cache_file" >&5
-echo "$as_me: creating cache $cache_file" >&6;}
- >$cache_file
-fi
-
-# Check that the precious variables saved in the cache have kept the same
-# value.
-ac_cache_corrupted=false
-for ac_var in `(set) 2>&1 |
- sed -n 's/^ac_env_\([a-zA-Z_0-9]*\)_set=.*/\1/p'`; do
- eval ac_old_set=\$ac_cv_env_${ac_var}_set
- eval ac_new_set=\$ac_env_${ac_var}_set
- eval ac_old_val="\$ac_cv_env_${ac_var}_value"
- eval ac_new_val="\$ac_env_${ac_var}_value"
- case $ac_old_set,$ac_new_set in
- set,)
- { echo "$as_me:$LINENO: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&5
-echo "$as_me: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&2;}
- ac_cache_corrupted=: ;;
- ,set)
- { echo "$as_me:$LINENO: error: \`$ac_var' was not set in the previous run" >&5
-echo "$as_me: error: \`$ac_var' was not set in the previous run" >&2;}
- ac_cache_corrupted=: ;;
- ,);;
- *)
- if test "x$ac_old_val" != "x$ac_new_val"; then
- { echo "$as_me:$LINENO: error: \`$ac_var' has changed since the previous run:" >&5
-echo "$as_me: error: \`$ac_var' has changed since the previous run:" >&2;}
- { echo "$as_me:$LINENO: former value: $ac_old_val" >&5
-echo "$as_me: former value: $ac_old_val" >&2;}
- { echo "$as_me:$LINENO: current value: $ac_new_val" >&5
-echo "$as_me: current value: $ac_new_val" >&2;}
- ac_cache_corrupted=:
- fi;;
- esac
- # Pass precious variables to config.status.
- if test "$ac_new_set" = set; then
- case $ac_new_val in
- *" "*|*" "*|*[\[\]\~\#\$\^\&\*\(\)\{\}\\\|\;\<\>\?\"\']*)
- ac_arg=$ac_var=`echo "$ac_new_val" | sed "s/'/'\\\\\\\\''/g"` ;;
- *) ac_arg=$ac_var=$ac_new_val ;;
- esac
- case " $ac_configure_args " in
- *" '$ac_arg' "*) ;; # Avoid dups. Use of quotes ensures accuracy.
- *) ac_configure_args="$ac_configure_args '$ac_arg'" ;;
- esac
- fi
-done
-if $ac_cache_corrupted; then
- { echo "$as_me:$LINENO: error: changes in the environment can compromise the build" >&5
-echo "$as_me: error: changes in the environment can compromise the build" >&2;}
- { { echo "$as_me:$LINENO: error: run \`make distclean' and/or \`rm $cache_file' and start over" >&5
-echo "$as_me: error: run \`make distclean' and/or \`rm $cache_file' and start over" >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-am__api_version="1.7"
-ac_aux_dir=
-for ac_dir in $srcdir $srcdir/.. $srcdir/../..; do
- if test -f $ac_dir/install-sh; then
- ac_aux_dir=$ac_dir
- ac_install_sh="$ac_aux_dir/install-sh -c"
- break
- elif test -f $ac_dir/install.sh; then
- ac_aux_dir=$ac_dir
- ac_install_sh="$ac_aux_dir/install.sh -c"
- break
- elif test -f $ac_dir/shtool; then
- ac_aux_dir=$ac_dir
- ac_install_sh="$ac_aux_dir/shtool install -c"
- break
- fi
-done
-if test -z "$ac_aux_dir"; then
- { { echo "$as_me:$LINENO: error: cannot find install-sh or install.sh in $srcdir $srcdir/.. $srcdir/../.." >&5
-echo "$as_me: error: cannot find install-sh or install.sh in $srcdir $srcdir/.. $srcdir/../.." >&2;}
- { (exit 1); exit 1; }; }
-fi
-ac_config_guess="$SHELL $ac_aux_dir/config.guess"
-ac_config_sub="$SHELL $ac_aux_dir/config.sub"
-ac_configure="$SHELL $ac_aux_dir/configure" # This should be Cygnus configure.
-
-# Find a good install program. We prefer a C program (faster),
-# so one script is as good as another. But avoid the broken or
-# incompatible versions:
-# SysV /etc/install, /usr/sbin/install
-# SunOS /usr/etc/install
-# IRIX /sbin/install
-# AIX /bin/install
-# AmigaOS /C/install, which installs bootblocks on floppy discs
-# AIX 4 /usr/bin/installbsd, which doesn't work without a -g flag
-# AFS /usr/afsws/bin/install, which mishandles nonexistent args
-# SVR4 /usr/ucb/install, which tries to use the nonexistent group "staff"
-# ./install, which can be erroneously created by make from ./install.sh.
-echo "$as_me:$LINENO: checking for a BSD-compatible install" >&5
-echo $ECHO_N "checking for a BSD-compatible install... $ECHO_C" >&6
-if test -z "$INSTALL"; then
-if test "${ac_cv_path_install+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- # Account for people who put trailing slashes in PATH elements.
-case $as_dir/ in
- ./ | .// | /cC/* | \
- /etc/* | /usr/sbin/* | /usr/etc/* | /sbin/* | /usr/afsws/bin/* | \
- /usr/ucb/* ) ;;
- *)
- # OSF1 and SCO ODT 3.0 have their own names for install.
- # Don't use installbsd from OSF since it installs stuff as root
- # by default.
- for ac_prog in ginstall scoinst install; do
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_prog$ac_exec_ext"; then
- if test $ac_prog = install &&
- grep dspmsg "$as_dir/$ac_prog$ac_exec_ext" >/dev/null 2>&1; then
- # AIX install. It has an incompatible calling convention.
- :
- elif test $ac_prog = install &&
- grep pwplus "$as_dir/$ac_prog$ac_exec_ext" >/dev/null 2>&1; then
- # program-specific install script used by HP pwplus--don't use.
- :
- else
- ac_cv_path_install="$as_dir/$ac_prog$ac_exec_ext -c"
- break 3
- fi
- fi
- done
- done
- ;;
-esac
-done
-
-
-fi
- if test "${ac_cv_path_install+set}" = set; then
- INSTALL=$ac_cv_path_install
- else
- # As a last resort, use the slow shell script. We don't cache a
- # path for INSTALL within a source directory, because that will
- # break other packages using the cache if that directory is
- # removed, or if the path is relative.
- INSTALL=$ac_install_sh
- fi
-fi
-echo "$as_me:$LINENO: result: $INSTALL" >&5
-echo "${ECHO_T}$INSTALL" >&6
-
-# Use test -z because SunOS4 sh mishandles braces in ${var-val}.
-# It thinks the first close brace ends the variable substitution.
-test -z "$INSTALL_PROGRAM" && INSTALL_PROGRAM='${INSTALL}'
-
-test -z "$INSTALL_SCRIPT" && INSTALL_SCRIPT='${INSTALL}'
-
-test -z "$INSTALL_DATA" && INSTALL_DATA='${INSTALL} -m 644'
-
-echo "$as_me:$LINENO: checking whether build environment is sane" >&5
-echo $ECHO_N "checking whether build environment is sane... $ECHO_C" >&6
-# Just in case
-sleep 1
-echo timestamp > conftest.file
-# Do `set' in a subshell so we don't clobber the current shell's
-# arguments. Must try -L first in case configure is actually a
-# symlink; some systems play weird games with the mod time of symlinks
-# (eg FreeBSD returns the mod time of the symlink's containing
-# directory).
-if (
- set X `ls -Lt $srcdir/configure conftest.file 2> /dev/null`
- if test "$*" = "X"; then
- # -L didn't work.
- set X `ls -t $srcdir/configure conftest.file`
- fi
- rm -f conftest.file
- if test "$*" != "X $srcdir/configure conftest.file" \
- && test "$*" != "X conftest.file $srcdir/configure"; then
-
- # If neither matched, then we have a broken ls. This can happen
- # if, for instance, CONFIG_SHELL is bash and it inherits a
- # broken ls alias from the environment. This has actually
- # happened. Such a system could not be considered "sane".
- { { echo "$as_me:$LINENO: error: ls -t appears to fail. Make sure there is not a broken
-alias in your environment" >&5
-echo "$as_me: error: ls -t appears to fail. Make sure there is not a broken
-alias in your environment" >&2;}
- { (exit 1); exit 1; }; }
- fi
-
- test "$2" = conftest.file
- )
-then
- # Ok.
- :
-else
- { { echo "$as_me:$LINENO: error: newly created file is older than distributed files!
-Check your system clock" >&5
-echo "$as_me: error: newly created file is older than distributed files!
-Check your system clock" >&2;}
- { (exit 1); exit 1; }; }
-fi
-echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
-test "$program_prefix" != NONE &&
- program_transform_name="s,^,$program_prefix,;$program_transform_name"
-# Use a double $ so make ignores it.
-test "$program_suffix" != NONE &&
- program_transform_name="s,\$,$program_suffix,;$program_transform_name"
-# Double any \ or $. echo might interpret backslashes.
-# By default was `s,x,x', remove it if useless.
-cat <<\_ACEOF >conftest.sed
-s/[\\$]/&&/g;s/;s,x,x,$//
-_ACEOF
-program_transform_name=`echo $program_transform_name | sed -f conftest.sed`
-rm conftest.sed
-
-
-# expand $ac_aux_dir to an absolute path
-am_aux_dir=`cd $ac_aux_dir && pwd`
-
-test x"${MISSING+set}" = xset || MISSING="\${SHELL} $am_aux_dir/missing"
-# Use eval to expand $SHELL
-if eval "$MISSING --run true"; then
- am_missing_run="$MISSING --run "
-else
- am_missing_run=
- { echo "$as_me:$LINENO: WARNING: \`missing' script is too old or missing" >&5
-echo "$as_me: WARNING: \`missing' script is too old or missing" >&2;}
-fi
-
-for ac_prog in gawk mawk nawk awk
-do
- # Extract the first word of "$ac_prog", so it can be a program name with args.
-set dummy $ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_AWK+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$AWK"; then
- ac_cv_prog_AWK="$AWK" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_AWK="$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-AWK=$ac_cv_prog_AWK
-if test -n "$AWK"; then
- echo "$as_me:$LINENO: result: $AWK" >&5
-echo "${ECHO_T}$AWK" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- test -n "$AWK" && break
-done
-
-echo "$as_me:$LINENO: checking whether ${MAKE-make} sets \$(MAKE)" >&5
-echo $ECHO_N "checking whether ${MAKE-make} sets \$(MAKE)... $ECHO_C" >&6
-set dummy ${MAKE-make}; ac_make=`echo "$2" | sed 'y,./+-,__p_,'`
-if eval "test \"\${ac_cv_prog_make_${ac_make}_set+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.make <<\_ACEOF
-all:
- @echo 'ac_maketemp="$(MAKE)"'
-_ACEOF
-# GNU make sometimes prints "make[1]: Entering...", which would confuse us.
-eval `${MAKE-make} -f conftest.make 2>/dev/null | grep temp=`
-if test -n "$ac_maketemp"; then
- eval ac_cv_prog_make_${ac_make}_set=yes
-else
- eval ac_cv_prog_make_${ac_make}_set=no
-fi
-rm -f conftest.make
-fi
-if eval "test \"`echo '$ac_cv_prog_make_'${ac_make}_set`\" = yes"; then
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
- SET_MAKE=
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
- SET_MAKE="MAKE=${MAKE-make}"
-fi
-
-rm -rf .tst 2>/dev/null
-mkdir .tst 2>/dev/null
-if test -d .tst; then
- am__leading_dot=.
-else
- am__leading_dot=_
-fi
-rmdir .tst 2>/dev/null
-
- # test to see if srcdir already configured
-if test "`cd $srcdir && pwd`" != "`pwd`" &&
- test -f $srcdir/config.status; then
- { { echo "$as_me:$LINENO: error: source directory already configured; run \"make distclean\" there first" >&5
-echo "$as_me: error: source directory already configured; run \"make distclean\" there first" >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-# test whether we have cygpath
-if test -z "$CYGPATH_W"; then
- if (cygpath --version) >/dev/null 2>/dev/null; then
- CYGPATH_W='cygpath -w'
- else
- CYGPATH_W=echo
- fi
-fi
-
-
-# Define the identity of the package.
- PACKAGE='RNAhybrid'
- VERSION='1.0'
-
-
-cat >>confdefs.h <<_ACEOF
-#define PACKAGE "$PACKAGE"
-_ACEOF
-
-
-cat >>confdefs.h <<_ACEOF
-#define VERSION "$VERSION"
-_ACEOF
-
-# Some tools Automake needs.
-
-ACLOCAL=${ACLOCAL-"${am_missing_run}aclocal-${am__api_version}"}
-
-
-AUTOCONF=${AUTOCONF-"${am_missing_run}autoconf"}
-
-
-AUTOMAKE=${AUTOMAKE-"${am_missing_run}automake-${am__api_version}"}
-
-
-AUTOHEADER=${AUTOHEADER-"${am_missing_run}autoheader"}
-
-
-MAKEINFO=${MAKEINFO-"${am_missing_run}makeinfo"}
-
-
-AMTAR=${AMTAR-"${am_missing_run}tar"}
-
-install_sh=${install_sh-"$am_aux_dir/install-sh"}
-
-# Installed binaries are usually stripped using `strip' when the user
-# run `make install-strip'. However `strip' might not be the right
-# tool to use in cross-compilation environments, therefore Automake
-# will honor the `STRIP' environment variable to overrule this program.
-if test "$cross_compiling" != no; then
- if test -n "$ac_tool_prefix"; then
- # Extract the first word of "${ac_tool_prefix}strip", so it can be a program name with args.
-set dummy ${ac_tool_prefix}strip; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_STRIP+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$STRIP"; then
- ac_cv_prog_STRIP="$STRIP" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_STRIP="${ac_tool_prefix}strip"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-STRIP=$ac_cv_prog_STRIP
-if test -n "$STRIP"; then
- echo "$as_me:$LINENO: result: $STRIP" >&5
-echo "${ECHO_T}$STRIP" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
-fi
-if test -z "$ac_cv_prog_STRIP"; then
- ac_ct_STRIP=$STRIP
- # Extract the first word of "strip", so it can be a program name with args.
-set dummy strip; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_STRIP+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$ac_ct_STRIP"; then
- ac_cv_prog_ac_ct_STRIP="$ac_ct_STRIP" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_ac_ct_STRIP="strip"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
- test -z "$ac_cv_prog_ac_ct_STRIP" && ac_cv_prog_ac_ct_STRIP=":"
-fi
-fi
-ac_ct_STRIP=$ac_cv_prog_ac_ct_STRIP
-if test -n "$ac_ct_STRIP"; then
- echo "$as_me:$LINENO: result: $ac_ct_STRIP" >&5
-echo "${ECHO_T}$ac_ct_STRIP" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- STRIP=$ac_ct_STRIP
-else
- STRIP="$ac_cv_prog_STRIP"
-fi
-
-fi
-INSTALL_STRIP_PROGRAM="\${SHELL} \$(install_sh) -c -s"
-
-# We need awk for the "check" target. The system "awk" is bad on
-# some platforms.
-
-
-
-
- ac_config_headers="$ac_config_headers config.h"
-
-
-ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-if test -n "$ac_tool_prefix"; then
- # Extract the first word of "${ac_tool_prefix}gcc", so it can be a program name with args.
-set dummy ${ac_tool_prefix}gcc; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$CC"; then
- ac_cv_prog_CC="$CC" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_CC="${ac_tool_prefix}gcc"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-CC=$ac_cv_prog_CC
-if test -n "$CC"; then
- echo "$as_me:$LINENO: result: $CC" >&5
-echo "${ECHO_T}$CC" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
-fi
-if test -z "$ac_cv_prog_CC"; then
- ac_ct_CC=$CC
- # Extract the first word of "gcc", so it can be a program name with args.
-set dummy gcc; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$ac_ct_CC"; then
- ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_ac_ct_CC="gcc"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-ac_ct_CC=$ac_cv_prog_ac_ct_CC
-if test -n "$ac_ct_CC"; then
- echo "$as_me:$LINENO: result: $ac_ct_CC" >&5
-echo "${ECHO_T}$ac_ct_CC" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- CC=$ac_ct_CC
-else
- CC="$ac_cv_prog_CC"
-fi
-
-if test -z "$CC"; then
- if test -n "$ac_tool_prefix"; then
- # Extract the first word of "${ac_tool_prefix}cc", so it can be a program name with args.
-set dummy ${ac_tool_prefix}cc; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$CC"; then
- ac_cv_prog_CC="$CC" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_CC="${ac_tool_prefix}cc"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-CC=$ac_cv_prog_CC
-if test -n "$CC"; then
- echo "$as_me:$LINENO: result: $CC" >&5
-echo "${ECHO_T}$CC" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
-fi
-if test -z "$ac_cv_prog_CC"; then
- ac_ct_CC=$CC
- # Extract the first word of "cc", so it can be a program name with args.
-set dummy cc; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$ac_ct_CC"; then
- ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_ac_ct_CC="cc"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-ac_ct_CC=$ac_cv_prog_ac_ct_CC
-if test -n "$ac_ct_CC"; then
- echo "$as_me:$LINENO: result: $ac_ct_CC" >&5
-echo "${ECHO_T}$ac_ct_CC" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- CC=$ac_ct_CC
-else
- CC="$ac_cv_prog_CC"
-fi
-
-fi
-if test -z "$CC"; then
- # Extract the first word of "cc", so it can be a program name with args.
-set dummy cc; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$CC"; then
- ac_cv_prog_CC="$CC" # Let the user override the test.
-else
- ac_prog_rejected=no
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- if test "$as_dir/$ac_word$ac_exec_ext" = "/usr/ucb/cc"; then
- ac_prog_rejected=yes
- continue
- fi
- ac_cv_prog_CC="cc"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-if test $ac_prog_rejected = yes; then
- # We found a bogon in the path, so make sure we never use it.
- set dummy $ac_cv_prog_CC
- shift
- if test $# != 0; then
- # We chose a different compiler from the bogus one.
- # However, it has the same basename, so the bogon will be chosen
- # first if we set CC to just the basename; use the full file name.
- shift
- ac_cv_prog_CC="$as_dir/$ac_word${1+' '}$@"
- fi
-fi
-fi
-fi
-CC=$ac_cv_prog_CC
-if test -n "$CC"; then
- echo "$as_me:$LINENO: result: $CC" >&5
-echo "${ECHO_T}$CC" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
-fi
-if test -z "$CC"; then
- if test -n "$ac_tool_prefix"; then
- for ac_prog in cl
- do
- # Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
-set dummy $ac_tool_prefix$ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$CC"; then
- ac_cv_prog_CC="$CC" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_CC="$ac_tool_prefix$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-CC=$ac_cv_prog_CC
-if test -n "$CC"; then
- echo "$as_me:$LINENO: result: $CC" >&5
-echo "${ECHO_T}$CC" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- test -n "$CC" && break
- done
-fi
-if test -z "$CC"; then
- ac_ct_CC=$CC
- for ac_prog in cl
-do
- # Extract the first word of "$ac_prog", so it can be a program name with args.
-set dummy $ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$ac_ct_CC"; then
- ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_ac_ct_CC="$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-ac_ct_CC=$ac_cv_prog_ac_ct_CC
-if test -n "$ac_ct_CC"; then
- echo "$as_me:$LINENO: result: $ac_ct_CC" >&5
-echo "${ECHO_T}$ac_ct_CC" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- test -n "$ac_ct_CC" && break
-done
-
- CC=$ac_ct_CC
-fi
-
-fi
-
-
-test -z "$CC" && { { echo "$as_me:$LINENO: error: no acceptable C compiler found in \$PATH
-See \`config.log' for more details." >&5
-echo "$as_me: error: no acceptable C compiler found in \$PATH
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
-
-# Provide some information about the compiler.
-echo "$as_me:$LINENO:" \
- "checking for C compiler version" >&5
-ac_compiler=`set X $ac_compile; echo $2`
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler --version </dev/null >&5\"") >&5
- (eval $ac_compiler --version </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler -v </dev/null >&5\"") >&5
- (eval $ac_compiler -v </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler -V </dev/null >&5\"") >&5
- (eval $ac_compiler -V </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-
-cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-ac_clean_files_save=$ac_clean_files
-ac_clean_files="$ac_clean_files a.out a.exe b.out"
-# Try to create an executable without -o first, disregard a.out.
-# It will help us diagnose broken compilers, and finding out an intuition
-# of exeext.
-echo "$as_me:$LINENO: checking for C compiler default output" >&5
-echo $ECHO_N "checking for C compiler default output... $ECHO_C" >&6
-ac_link_default=`echo "$ac_link" | sed 's/ -o *conftest[^ ]*//'`
-if { (eval echo "$as_me:$LINENO: \"$ac_link_default\"") >&5
- (eval $ac_link_default) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- # Find the output, starting from the most likely. This scheme is
-# not robust to junk in `.', hence go to wildcards (a.*) only as a last
-# resort.
-
-# Be careful to initialize this variable, since it used to be cached.
-# Otherwise an old cache value of `no' led to `EXEEXT = no' in a Makefile.
-ac_cv_exeext=
-# b.out is created by i960 compilers.
-for ac_file in a_out.exe a.exe conftest.exe a.out conftest a.* conftest.* b.out
-do
- test -f "$ac_file" || continue
- case $ac_file in
- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.o | *.obj )
- ;;
- conftest.$ac_ext )
- # This is the source file.
- ;;
- [ab].out )
- # We found the default executable, but exeext='' is most
- # certainly right.
- break;;
- *.* )
- ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
- # FIXME: I believe we export ac_cv_exeext for Libtool,
- # but it would be cool to find out if it's true. Does anybody
- # maintain Libtool? --akim.
- export ac_cv_exeext
- break;;
- * )
- break;;
- esac
-done
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-{ { echo "$as_me:$LINENO: error: C compiler cannot create executables
-See \`config.log' for more details." >&5
-echo "$as_me: error: C compiler cannot create executables
-See \`config.log' for more details." >&2;}
- { (exit 77); exit 77; }; }
-fi
-
-ac_exeext=$ac_cv_exeext
-echo "$as_me:$LINENO: result: $ac_file" >&5
-echo "${ECHO_T}$ac_file" >&6
-
-# Check the compiler produces executables we can run. If not, either
-# the compiler is broken, or we cross compile.
-echo "$as_me:$LINENO: checking whether the C compiler works" >&5
-echo $ECHO_N "checking whether the C compiler works... $ECHO_C" >&6
-# FIXME: These cross compiler hacks should be removed for Autoconf 3.0
-# If not cross compiling, check that we can run a simple program.
-if test "$cross_compiling" != yes; then
- if { ac_try='./$ac_file'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- cross_compiling=no
- else
- if test "$cross_compiling" = maybe; then
- cross_compiling=yes
- else
- { { echo "$as_me:$LINENO: error: cannot run C compiled programs.
-If you meant to cross compile, use \`--host'.
-See \`config.log' for more details." >&5
-echo "$as_me: error: cannot run C compiled programs.
-If you meant to cross compile, use \`--host'.
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
- fi
- fi
-fi
-echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
-
-rm -f a.out a.exe conftest$ac_cv_exeext b.out
-ac_clean_files=$ac_clean_files_save
-# Check the compiler produces executables we can run. If not, either
-# the compiler is broken, or we cross compile.
-echo "$as_me:$LINENO: checking whether we are cross compiling" >&5
-echo $ECHO_N "checking whether we are cross compiling... $ECHO_C" >&6
-echo "$as_me:$LINENO: result: $cross_compiling" >&5
-echo "${ECHO_T}$cross_compiling" >&6
-
-echo "$as_me:$LINENO: checking for suffix of executables" >&5
-echo $ECHO_N "checking for suffix of executables... $ECHO_C" >&6
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- # If both `conftest.exe' and `conftest' are `present' (well, observable)
-# catch `conftest.exe'. For instance with Cygwin, `ls conftest' will
-# work properly (i.e., refer to `conftest.exe'), while it won't with
-# `rm'.
-for ac_file in conftest.exe conftest conftest.*; do
- test -f "$ac_file" || continue
- case $ac_file in
- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.o | *.obj ) ;;
- *.* ) ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
- export ac_cv_exeext
- break;;
- * ) break;;
- esac
-done
-else
- { { echo "$as_me:$LINENO: error: cannot compute suffix of executables: cannot compile and link
-See \`config.log' for more details." >&5
-echo "$as_me: error: cannot compute suffix of executables: cannot compile and link
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-rm -f conftest$ac_cv_exeext
-echo "$as_me:$LINENO: result: $ac_cv_exeext" >&5
-echo "${ECHO_T}$ac_cv_exeext" >&6
-
-rm -f conftest.$ac_ext
-EXEEXT=$ac_cv_exeext
-ac_exeext=$EXEEXT
-echo "$as_me:$LINENO: checking for suffix of object files" >&5
-echo $ECHO_N "checking for suffix of object files... $ECHO_C" >&6
-if test "${ac_cv_objext+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.o conftest.obj
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- for ac_file in `(ls conftest.o conftest.obj; ls conftest.*) 2>/dev/null`; do
- case $ac_file in
- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg ) ;;
- *) ac_cv_objext=`expr "$ac_file" : '.*\.\(.*\)'`
- break;;
- esac
-done
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-{ { echo "$as_me:$LINENO: error: cannot compute suffix of object files: cannot compile
-See \`config.log' for more details." >&5
-echo "$as_me: error: cannot compute suffix of object files: cannot compile
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-rm -f conftest.$ac_cv_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_objext" >&5
-echo "${ECHO_T}$ac_cv_objext" >&6
-OBJEXT=$ac_cv_objext
-ac_objext=$OBJEXT
-echo "$as_me:$LINENO: checking whether we are using the GNU C compiler" >&5
-echo $ECHO_N "checking whether we are using the GNU C compiler... $ECHO_C" >&6
-if test "${ac_cv_c_compiler_gnu+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-#ifndef __GNUC__
- choke me
-#endif
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_compiler_gnu=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_compiler_gnu=no
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-ac_cv_c_compiler_gnu=$ac_compiler_gnu
-
-fi
-echo "$as_me:$LINENO: result: $ac_cv_c_compiler_gnu" >&5
-echo "${ECHO_T}$ac_cv_c_compiler_gnu" >&6
-GCC=`test $ac_compiler_gnu = yes && echo yes`
-ac_test_CFLAGS=${CFLAGS+set}
-ac_save_CFLAGS=$CFLAGS
-CFLAGS="-g"
-echo "$as_me:$LINENO: checking whether $CC accepts -g" >&5
-echo $ECHO_N "checking whether $CC accepts -g... $ECHO_C" >&6
-if test "${ac_cv_prog_cc_g+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_prog_cc_g=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_prog_cc_g=no
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_prog_cc_g" >&5
-echo "${ECHO_T}$ac_cv_prog_cc_g" >&6
-if test "$ac_test_CFLAGS" = set; then
- CFLAGS=$ac_save_CFLAGS
-elif test $ac_cv_prog_cc_g = yes; then
- if test "$GCC" = yes; then
- CFLAGS="-g -O2"
- else
- CFLAGS="-g"
- fi
-else
- if test "$GCC" = yes; then
- CFLAGS="-O2"
- else
- CFLAGS=
- fi
-fi
-echo "$as_me:$LINENO: checking for $CC option to accept ANSI C" >&5
-echo $ECHO_N "checking for $CC option to accept ANSI C... $ECHO_C" >&6
-if test "${ac_cv_prog_cc_stdc+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_prog_cc_stdc=no
-ac_save_CC=$CC
-cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <stdarg.h>
-#include <stdio.h>
-#include <sys/types.h>
-#include <sys/stat.h>
-/* Most of the following tests are stolen from RCS 5.7's src/conf.sh. */
-struct buf { int x; };
-FILE * (*rcsopen) (struct buf *, struct stat *, int);
-static char *e (p, i)
- char **p;
- int i;
-{
- return p[i];
-}
-static char *f (char * (*g) (char **, int), char **p, ...)
-{
- char *s;
- va_list v;
- va_start (v,p);
- s = g (p, va_arg (v,int));
- va_end (v);
- return s;
-}
-int test (int i, double x);
-struct s1 {int (*f) (int a);};
-struct s2 {int (*f) (double a);};
-int pairnames (int, char **, FILE *(*)(struct buf *, struct stat *, int), int, int);
-int argc;
-char **argv;
-int
-main ()
-{
-return f (e, argv, 0) != argv[0] || f (e, argv, 1) != argv[1];
- ;
- return 0;
-}
-_ACEOF
-# Don't try gcc -ansi; that turns off useful extensions and
-# breaks some systems' header files.
-# AIX -qlanglvl=ansi
-# Ultrix and OSF/1 -std1
-# HP-UX 10.20 and later -Ae
-# HP-UX older versions -Aa -D_HPUX_SOURCE
-# SVR4 -Xc -D__EXTENSIONS__
-for ac_arg in "" -qlanglvl=ansi -std1 -Ae "-Aa -D_HPUX_SOURCE" "-Xc -D__EXTENSIONS__"
-do
- CC="$ac_save_CC $ac_arg"
- rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_prog_cc_stdc=$ac_arg
-break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-fi
-rm -f conftest.$ac_objext
-done
-rm -f conftest.$ac_ext conftest.$ac_objext
-CC=$ac_save_CC
-
-fi
-
-case "x$ac_cv_prog_cc_stdc" in
- x|xno)
- echo "$as_me:$LINENO: result: none needed" >&5
-echo "${ECHO_T}none needed" >&6 ;;
- *)
- echo "$as_me:$LINENO: result: $ac_cv_prog_cc_stdc" >&5
-echo "${ECHO_T}$ac_cv_prog_cc_stdc" >&6
- CC="$CC $ac_cv_prog_cc_stdc" ;;
-esac
-
-# Some people use a C++ compiler to compile C. Since we use `exit',
-# in C++ we need to declare it. In case someone uses the same compiler
-# for both compiling C and C++ we need to have the C++ compiler decide
-# the declaration of exit, since it's the most demanding environment.
-cat >conftest.$ac_ext <<_ACEOF
-#ifndef __cplusplus
- choke me
-#endif
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- for ac_declaration in \
- ''\
- '#include <stdlib.h>' \
- 'extern "C" void std::exit (int) throw (); using std::exit;' \
- 'extern "C" void std::exit (int); using std::exit;' \
- 'extern "C" void exit (int) throw ();' \
- 'extern "C" void exit (int);' \
- 'void exit (int);'
-do
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <stdlib.h>
-$ac_declaration
-int
-main ()
-{
-exit (42);
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-continue
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_declaration
-int
-main ()
-{
-exit (42);
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-done
-rm -f conftest*
-if test -n "$ac_declaration"; then
- echo '#ifdef __cplusplus' >>confdefs.h
- echo $ac_declaration >>confdefs.h
- echo '#endif' >>confdefs.h
-fi
-
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-DEPDIR="${am__leading_dot}deps"
-
- ac_config_commands="$ac_config_commands depfiles"
-
-
-am_make=${MAKE-make}
-cat > confinc << 'END'
-doit:
- @echo done
-END
-# If we don't find an include directive, just comment out the code.
-echo "$as_me:$LINENO: checking for style of include used by $am_make" >&5
-echo $ECHO_N "checking for style of include used by $am_make... $ECHO_C" >&6
-am__include="#"
-am__quote=
-_am_result=none
-# First try GNU make style include.
-echo "include confinc" > confmf
-# We grep out `Entering directory' and `Leaving directory'
-# messages which can occur if `w' ends up in MAKEFLAGS.
-# In particular we don't look at `^make:' because GNU make might
-# be invoked under some other name (usually "gmake"), in which
-# case it prints its new name instead of `make'.
-if test "`$am_make -s -f confmf 2> /dev/null | grep -v 'ing directory'`" = "done"; then
- am__include=include
- am__quote=
- _am_result=GNU
-fi
-# Now try BSD make style include.
-if test "$am__include" = "#"; then
- echo '.include "confinc"' > confmf
- if test "`$am_make -s -f confmf 2> /dev/null`" = "done"; then
- am__include=.include
- am__quote="\""
- _am_result=BSD
- fi
-fi
-
-
-echo "$as_me:$LINENO: result: $_am_result" >&5
-echo "${ECHO_T}$_am_result" >&6
-rm -f confinc confmf
-
-# Check whether --enable-dependency-tracking or --disable-dependency-tracking was given.
-if test "${enable_dependency_tracking+set}" = set; then
- enableval="$enable_dependency_tracking"
-
-fi;
-if test "x$enable_dependency_tracking" != xno; then
- am_depcomp="$ac_aux_dir/depcomp"
- AMDEPBACKSLASH='\'
-fi
-
-
-if test "x$enable_dependency_tracking" != xno; then
- AMDEP_TRUE=
- AMDEP_FALSE='#'
-else
- AMDEP_TRUE='#'
- AMDEP_FALSE=
-fi
-
-
-
-
-depcc="$CC" am_compiler_list=
-
-echo "$as_me:$LINENO: checking dependency style of $depcc" >&5
-echo $ECHO_N "checking dependency style of $depcc... $ECHO_C" >&6
-if test "${am_cv_CC_dependencies_compiler_type+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -z "$AMDEP_TRUE" && test -f "$am_depcomp"; then
- # We make a subdir and do the tests there. Otherwise we can end up
- # making bogus files that we don't know about and never remove. For
- # instance it was reported that on HP-UX the gcc test will end up
- # making a dummy file named `D' -- because `-MD' means `put the output
- # in D'.
- mkdir conftest.dir
- # Copy depcomp to subdir because otherwise we won't find it if we're
- # using a relative directory.
- cp "$am_depcomp" conftest.dir
- cd conftest.dir
-
- am_cv_CC_dependencies_compiler_type=none
- if test "$am_compiler_list" = ""; then
- am_compiler_list=`sed -n 's/^#*\([a-zA-Z0-9]*\))$/\1/p' < ./depcomp`
- fi
- for depmode in $am_compiler_list; do
- # We need to recreate these files for each test, as the compiler may
- # overwrite some of them when testing with obscure command lines.
- # This happens at least with the AIX C compiler.
- echo '#include "conftest.h"' > conftest.c
- echo 'int i;' > conftest.h
- echo "${am__include} ${am__quote}conftest.Po${am__quote}" > confmf
-
- case $depmode in
- nosideeffect)
- # after this tag, mechanisms are not by side-effect, so they'll
- # only be used when explicitly requested
- if test "x$enable_dependency_tracking" = xyes; then
- continue
- else
- break
- fi
- ;;
- none) break ;;
- esac
- # We check with `-c' and `-o' for the sake of the "dashmstdout"
- # mode. It turns out that the SunPro C++ compiler does not properly
- # handle `-M -o', and we need to detect this.
- if depmode=$depmode \
- source=conftest.c object=conftest.o \
- depfile=conftest.Po tmpdepfile=conftest.TPo \
- $SHELL ./depcomp $depcc -c -o conftest.o conftest.c \
- >/dev/null 2>conftest.err &&
- grep conftest.h conftest.Po > /dev/null 2>&1 &&
- ${MAKE-make} -s -f confmf > /dev/null 2>&1; then
- # icc doesn't choke on unknown options, it will just issue warnings
- # (even with -Werror). So we grep stderr for any message
- # that says an option was ignored.
- if grep 'ignoring option' conftest.err >/dev/null 2>&1; then :; else
- am_cv_CC_dependencies_compiler_type=$depmode
- break
- fi
- fi
- done
-
- cd ..
- rm -rf conftest.dir
-else
- am_cv_CC_dependencies_compiler_type=none
-fi
-
-fi
-echo "$as_me:$LINENO: result: $am_cv_CC_dependencies_compiler_type" >&5
-echo "${ECHO_T}$am_cv_CC_dependencies_compiler_type" >&6
-CCDEPMODE=depmode=$am_cv_CC_dependencies_compiler_type
-
-
-
-if
- test "x$enable_dependency_tracking" != xno \
- && test "$am_cv_CC_dependencies_compiler_type" = gcc3; then
- am__fastdepCC_TRUE=
- am__fastdepCC_FALSE='#'
-else
- am__fastdepCC_TRUE='#'
- am__fastdepCC_FALSE=
-fi
-
-
-ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
-
-
-
-echo "$as_me:$LINENO: checking for log in -lm" >&5
-echo $ECHO_N "checking for log in -lm... $ECHO_C" >&6
-if test "${ac_cv_lib_m_log+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lm $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-/* Override any gcc2 internal prototype to avoid an error. */
-#ifdef __cplusplus
-extern "C"
-#endif
-/* We use char because int might match the return type of a gcc2
- builtin and then its argument prototype would still apply. */
-char log ();
-int
-main ()
-{
-log ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_lib_m_log=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_lib_m_log=no
-fi
-rm -f conftest.$ac_objext conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-echo "$as_me:$LINENO: result: $ac_cv_lib_m_log" >&5
-echo "${ECHO_T}$ac_cv_lib_m_log" >&6
-if test $ac_cv_lib_m_log = yes; then
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBM 1
-_ACEOF
-
- LIBS="-lm $LIBS"
-
-else
- { { echo "$as_me:$LINENO: error: math library is missing" >&5
-echo "$as_me: error: math library is missing" >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-
-echo "$as_me:$LINENO: checking for g2_open_vd in -lg2" >&5
-echo $ECHO_N "checking for g2_open_vd in -lg2... $ECHO_C" >&6
-if test "${ac_cv_lib_g2_g2_open_vd+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lg2 $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-/* Override any gcc2 internal prototype to avoid an error. */
-#ifdef __cplusplus
-extern "C"
-#endif
-/* We use char because int might match the return type of a gcc2
- builtin and then its argument prototype would still apply. */
-char g2_open_vd ();
-int
-main ()
-{
-g2_open_vd ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_lib_g2_g2_open_vd=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_lib_g2_g2_open_vd=no
-fi
-rm -f conftest.$ac_objext conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-echo "$as_me:$LINENO: result: $ac_cv_lib_g2_g2_open_vd" >&5
-echo "${ECHO_T}$ac_cv_lib_g2_g2_open_vd" >&6
-if test $ac_cv_lib_g2_g2_open_vd = yes; then
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBG2 1
-_ACEOF
-
- LIBS="-lg2 $LIBS"
-
-else
- { echo "$as_me:$LINENO: WARNING: libg2.a is missing. You can download it at http://g2.sourceforge.net/" >&5
-echo "$as_me: WARNING: libg2.a is missing. You can download it at http://g2.sourceforge.net/" >&2;}
-fi
-
-
-echo "$as_me:$LINENO: checking for gdImageLine in -lgd" >&5
-echo $ECHO_N "checking for gdImageLine in -lgd... $ECHO_C" >&6
-if test "${ac_cv_lib_gd_gdImageLine+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lgd $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-/* Override any gcc2 internal prototype to avoid an error. */
-#ifdef __cplusplus
-extern "C"
-#endif
-/* We use char because int might match the return type of a gcc2
- builtin and then its argument prototype would still apply. */
-char gdImageLine ();
-int
-main ()
-{
-gdImageLine ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_lib_gd_gdImageLine=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_lib_gd_gdImageLine=no
-fi
-rm -f conftest.$ac_objext conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-echo "$as_me:$LINENO: result: $ac_cv_lib_gd_gdImageLine" >&5
-echo "${ECHO_T}$ac_cv_lib_gd_gdImageLine" >&6
-if test $ac_cv_lib_gd_gdImageLine = yes; then
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBGD 1
-_ACEOF
-
- LIBS="-lgd $LIBS"
-
-fi
-
-
-ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-echo "$as_me:$LINENO: checking how to run the C preprocessor" >&5
-echo $ECHO_N "checking how to run the C preprocessor... $ECHO_C" >&6
-# On Suns, sometimes $CPP names a directory.
-if test -n "$CPP" && test -d "$CPP"; then
- CPP=
-fi
-if test -z "$CPP"; then
- if test "${ac_cv_prog_CPP+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- # Double quotes because CPP needs to be expanded
- for CPP in "$CC -E" "$CC -E -traditional-cpp" "/lib/cpp"
- do
- ac_preproc_ok=false
-for ac_c_preproc_warn_flag in '' yes
-do
- # Use a header file that comes with gcc, so configuring glibc
- # with a fresh cross-compiler works.
- # Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
- # <limits.h> exists even on freestanding compilers.
- # On the NeXT, cc -E runs the code through the compiler's parser,
- # not just through cpp. "Syntax error" is here to catch this case.
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#ifdef __STDC__
-# include <limits.h>
-#else
-# include <assert.h>
-#endif
- Syntax error
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- # Broken: fails on valid input.
-continue
-fi
-rm -f conftest.err conftest.$ac_ext
-
- # OK, works on sane cases. Now check whether non-existent headers
- # can be detected and how.
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <ac_nonexistent.h>
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- # Broken: success on invalid input.
-continue
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- # Passes both tests.
-ac_preproc_ok=:
-break
-fi
-rm -f conftest.err conftest.$ac_ext
-
-done
-# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
-rm -f conftest.err conftest.$ac_ext
-if $ac_preproc_ok; then
- break
-fi
-
- done
- ac_cv_prog_CPP=$CPP
-
-fi
- CPP=$ac_cv_prog_CPP
-else
- ac_cv_prog_CPP=$CPP
-fi
-echo "$as_me:$LINENO: result: $CPP" >&5
-echo "${ECHO_T}$CPP" >&6
-ac_preproc_ok=false
-for ac_c_preproc_warn_flag in '' yes
-do
- # Use a header file that comes with gcc, so configuring glibc
- # with a fresh cross-compiler works.
- # Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
- # <limits.h> exists even on freestanding compilers.
- # On the NeXT, cc -E runs the code through the compiler's parser,
- # not just through cpp. "Syntax error" is here to catch this case.
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#ifdef __STDC__
-# include <limits.h>
-#else
-# include <assert.h>
-#endif
- Syntax error
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- # Broken: fails on valid input.
-continue
-fi
-rm -f conftest.err conftest.$ac_ext
-
- # OK, works on sane cases. Now check whether non-existent headers
- # can be detected and how.
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <ac_nonexistent.h>
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- # Broken: success on invalid input.
-continue
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- # Passes both tests.
-ac_preproc_ok=:
-break
-fi
-rm -f conftest.err conftest.$ac_ext
-
-done
-# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
-rm -f conftest.err conftest.$ac_ext
-if $ac_preproc_ok; then
- :
-else
- { { echo "$as_me:$LINENO: error: C preprocessor \"$CPP\" fails sanity check
-See \`config.log' for more details." >&5
-echo "$as_me: error: C preprocessor \"$CPP\" fails sanity check
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
-
-echo "$as_me:$LINENO: checking for egrep" >&5
-echo $ECHO_N "checking for egrep... $ECHO_C" >&6
-if test "${ac_cv_prog_egrep+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if echo a | (grep -E '(a|b)') >/dev/null 2>&1
- then ac_cv_prog_egrep='grep -E'
- else ac_cv_prog_egrep='egrep'
- fi
-fi
-echo "$as_me:$LINENO: result: $ac_cv_prog_egrep" >&5
-echo "${ECHO_T}$ac_cv_prog_egrep" >&6
- EGREP=$ac_cv_prog_egrep
-
-
-echo "$as_me:$LINENO: checking for ANSI C header files" >&5
-echo $ECHO_N "checking for ANSI C header files... $ECHO_C" >&6
-if test "${ac_cv_header_stdc+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <stdlib.h>
-#include <stdarg.h>
-#include <string.h>
-#include <float.h>
-
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_header_stdc=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_header_stdc=no
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-
-if test $ac_cv_header_stdc = yes; then
- # SunOS 4.x string.h does not declare mem*, contrary to ANSI.
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <string.h>
-
-_ACEOF
-if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
- $EGREP "memchr" >/dev/null 2>&1; then
- :
-else
- ac_cv_header_stdc=no
-fi
-rm -f conftest*
-
-fi
-
-if test $ac_cv_header_stdc = yes; then
- # ISC 2.0.2 stdlib.h does not declare free, contrary to ANSI.
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <stdlib.h>
-
-_ACEOF
-if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
- $EGREP "free" >/dev/null 2>&1; then
- :
-else
- ac_cv_header_stdc=no
-fi
-rm -f conftest*
-
-fi
-
-if test $ac_cv_header_stdc = yes; then
- # /bin/cc in Irix-4.0.5 gets non-ANSI ctype macros unless using -ansi.
- if test "$cross_compiling" = yes; then
- :
-else
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <ctype.h>
-#if ((' ' & 0x0FF) == 0x020)
-# define ISLOWER(c) ('a' <= (c) && (c) <= 'z')
-# define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c))
-#else
-# define ISLOWER(c) \
- (('a' <= (c) && (c) <= 'i') \
- || ('j' <= (c) && (c) <= 'r') \
- || ('s' <= (c) && (c) <= 'z'))
-# define TOUPPER(c) (ISLOWER(c) ? ((c) | 0x40) : (c))
-#endif
-
-#define XOR(e, f) (((e) && !(f)) || (!(e) && (f)))
-int
-main ()
-{
- int i;
- for (i = 0; i < 256; i++)
- if (XOR (islower (i), ISLOWER (i))
- || toupper (i) != TOUPPER (i))
- exit(2);
- exit (0);
-}
-_ACEOF
-rm -f conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && { ac_try='./conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- :
-else
- echo "$as_me: program exited with status $ac_status" >&5
-echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-( exit $ac_status )
-ac_cv_header_stdc=no
-fi
-rm -f core core.* *.core gmon.out bb.out conftest$ac_exeext conftest.$ac_objext conftest.$ac_ext
-fi
-fi
-fi
-echo "$as_me:$LINENO: result: $ac_cv_header_stdc" >&5
-echo "${ECHO_T}$ac_cv_header_stdc" >&6
-if test $ac_cv_header_stdc = yes; then
-
-cat >>confdefs.h <<\_ACEOF
-#define STDC_HEADERS 1
-_ACEOF
-
-fi
-
-# On IRIX 5.3, sys/types and inttypes.h are conflicting.
-
-
-
-
-
-
-
-
-
-for ac_header in sys/types.h sys/stat.h stdlib.h string.h memory.h strings.h \
- inttypes.h stdint.h unistd.h
-do
-as_ac_Header=`echo "ac_cv_header_$ac_header" | $as_tr_sh`
-echo "$as_me:$LINENO: checking for $ac_header" >&5
-echo $ECHO_N "checking for $ac_header... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-
-#include <$ac_header>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- eval "$as_ac_Header=yes"
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-eval "$as_ac_Header=no"
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Header'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Header'}'`" >&6
-if test `eval echo '${'$as_ac_Header'}'` = yes; then
- cat >>confdefs.h <<_ACEOF
-#define `echo "HAVE_$ac_header" | $as_tr_cpp` 1
-_ACEOF
-
-fi
-
-done
-
-
-if test "${ac_cv_header_g2_h+set}" = set; then
- echo "$as_me:$LINENO: checking for g2.h" >&5
-echo $ECHO_N "checking for g2.h... $ECHO_C" >&6
-if test "${ac_cv_header_g2_h+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-fi
-echo "$as_me:$LINENO: result: $ac_cv_header_g2_h" >&5
-echo "${ECHO_T}$ac_cv_header_g2_h" >&6
-else
- # Is the header compilable?
-echo "$as_me:$LINENO: checking g2.h usability" >&5
-echo $ECHO_N "checking g2.h usability... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-#include <g2.h>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_header_compiler=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_header_compiler=no
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_compiler" >&5
-echo "${ECHO_T}$ac_header_compiler" >&6
-
-# Is the header present?
-echo "$as_me:$LINENO: checking g2.h presence" >&5
-echo $ECHO_N "checking g2.h presence... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <g2.h>
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- ac_header_preproc=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_header_preproc=no
-fi
-rm -f conftest.err conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_preproc" >&5
-echo "${ECHO_T}$ac_header_preproc" >&6
-
-# So? What about this header?
-case $ac_header_compiler:$ac_header_preproc in
- yes:no )
- { echo "$as_me:$LINENO: WARNING: g2.h: accepted by the compiler, rejected by the preprocessor!" >&5
-echo "$as_me: WARNING: g2.h: accepted by the compiler, rejected by the preprocessor!" >&2;}
- { echo "$as_me:$LINENO: WARNING: g2.h: proceeding with the preprocessor's result" >&5
-echo "$as_me: WARNING: g2.h: proceeding with the preprocessor's result" >&2;}
- (
- cat <<\_ASBOX
-## ------------------------------------ ##
-## Report this to bug-autoconf at gnu.org. ##
-## ------------------------------------ ##
-_ASBOX
- ) |
- sed "s/^/$as_me: WARNING: /" >&2
- ;;
- no:yes )
- { echo "$as_me:$LINENO: WARNING: g2.h: present but cannot be compiled" >&5
-echo "$as_me: WARNING: g2.h: present but cannot be compiled" >&2;}
- { echo "$as_me:$LINENO: WARNING: g2.h: check for missing prerequisite headers?" >&5
-echo "$as_me: WARNING: g2.h: check for missing prerequisite headers?" >&2;}
- { echo "$as_me:$LINENO: WARNING: g2.h: proceeding with the preprocessor's result" >&5
-echo "$as_me: WARNING: g2.h: proceeding with the preprocessor's result" >&2;}
- (
- cat <<\_ASBOX
-## ------------------------------------ ##
-## Report this to bug-autoconf at gnu.org. ##
-## ------------------------------------ ##
-_ASBOX
- ) |
- sed "s/^/$as_me: WARNING: /" >&2
- ;;
-esac
-echo "$as_me:$LINENO: checking for g2.h" >&5
-echo $ECHO_N "checking for g2.h... $ECHO_C" >&6
-if test "${ac_cv_header_g2_h+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_header_g2_h=$ac_header_preproc
-fi
-echo "$as_me:$LINENO: result: $ac_cv_header_g2_h" >&5
-echo "${ECHO_T}$ac_cv_header_g2_h" >&6
-
-fi
-
-
-if test "${ac_cv_header_g2_PS_h+set}" = set; then
- echo "$as_me:$LINENO: checking for g2_PS.h" >&5
-echo $ECHO_N "checking for g2_PS.h... $ECHO_C" >&6
-if test "${ac_cv_header_g2_PS_h+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-fi
-echo "$as_me:$LINENO: result: $ac_cv_header_g2_PS_h" >&5
-echo "${ECHO_T}$ac_cv_header_g2_PS_h" >&6
-else
- # Is the header compilable?
-echo "$as_me:$LINENO: checking g2_PS.h usability" >&5
-echo $ECHO_N "checking g2_PS.h usability... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-#include <g2_PS.h>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_header_compiler=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_header_compiler=no
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_compiler" >&5
-echo "${ECHO_T}$ac_header_compiler" >&6
-
-# Is the header present?
-echo "$as_me:$LINENO: checking g2_PS.h presence" >&5
-echo $ECHO_N "checking g2_PS.h presence... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <g2_PS.h>
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- ac_header_preproc=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_header_preproc=no
-fi
-rm -f conftest.err conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_preproc" >&5
-echo "${ECHO_T}$ac_header_preproc" >&6
-
-# So? What about this header?
-case $ac_header_compiler:$ac_header_preproc in
- yes:no )
- { echo "$as_me:$LINENO: WARNING: g2_PS.h: accepted by the compiler, rejected by the preprocessor!" >&5
-echo "$as_me: WARNING: g2_PS.h: accepted by the compiler, rejected by the preprocessor!" >&2;}
- { echo "$as_me:$LINENO: WARNING: g2_PS.h: proceeding with the preprocessor's result" >&5
-echo "$as_me: WARNING: g2_PS.h: proceeding with the preprocessor's result" >&2;}
- (
- cat <<\_ASBOX
-## ------------------------------------ ##
-## Report this to bug-autoconf at gnu.org. ##
-## ------------------------------------ ##
-_ASBOX
- ) |
- sed "s/^/$as_me: WARNING: /" >&2
- ;;
- no:yes )
- { echo "$as_me:$LINENO: WARNING: g2_PS.h: present but cannot be compiled" >&5
-echo "$as_me: WARNING: g2_PS.h: present but cannot be compiled" >&2;}
- { echo "$as_me:$LINENO: WARNING: g2_PS.h: check for missing prerequisite headers?" >&5
-echo "$as_me: WARNING: g2_PS.h: check for missing prerequisite headers?" >&2;}
- { echo "$as_me:$LINENO: WARNING: g2_PS.h: proceeding with the preprocessor's result" >&5
-echo "$as_me: WARNING: g2_PS.h: proceeding with the preprocessor's result" >&2;}
- (
- cat <<\_ASBOX
-## ------------------------------------ ##
-## Report this to bug-autoconf at gnu.org. ##
-## ------------------------------------ ##
-_ASBOX
- ) |
- sed "s/^/$as_me: WARNING: /" >&2
- ;;
-esac
-echo "$as_me:$LINENO: checking for g2_PS.h" >&5
-echo $ECHO_N "checking for g2_PS.h... $ECHO_C" >&6
-if test "${ac_cv_header_g2_PS_h+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_header_g2_PS_h=$ac_header_preproc
-fi
-echo "$as_me:$LINENO: result: $ac_cv_header_g2_PS_h" >&5
-echo "${ECHO_T}$ac_cv_header_g2_PS_h" >&6
-
-fi
-
-
-
-echo "$as_me:$LINENO: checking for an ANSI C-conforming const" >&5
-echo $ECHO_N "checking for an ANSI C-conforming const... $ECHO_C" >&6
-if test "${ac_cv_c_const+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-/* FIXME: Include the comments suggested by Paul. */
-#ifndef __cplusplus
- /* Ultrix mips cc rejects this. */
- typedef int charset[2];
- const charset x;
- /* SunOS 4.1.1 cc rejects this. */
- char const *const *ccp;
- char **p;
- /* NEC SVR4.0.2 mips cc rejects this. */
- struct point {int x, y;};
- static struct point const zero = {0,0};
- /* AIX XL C 1.02.0.0 rejects this.
- It does not let you subtract one const X* pointer from another in
- an arm of an if-expression whose if-part is not a constant
- expression */
- const char *g = "string";
- ccp = &g + (g ? g-g : 0);
- /* HPUX 7.0 cc rejects these. */
- ++ccp;
- p = (char**) ccp;
- ccp = (char const *const *) p;
- { /* SCO 3.2v4 cc rejects this. */
- char *t;
- char const *s = 0 ? (char *) 0 : (char const *) 0;
-
- *t++ = 0;
- }
- { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */
- int x[] = {25, 17};
- const int *foo = &x[0];
- ++foo;
- }
- { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */
- typedef const int *iptr;
- iptr p = 0;
- ++p;
- }
- { /* AIX XL C 1.02.0.0 rejects this saying
- "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */
- struct s { int j; const int *ap[3]; };
- struct s *b; b->j = 5;
- }
- { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */
- const int foo = 10;
- }
-#endif
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_c_const=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_c_const=no
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_c_const" >&5
-echo "${ECHO_T}$ac_cv_c_const" >&6
-if test $ac_cv_c_const = no; then
-
-cat >>confdefs.h <<\_ACEOF
-#define const
-_ACEOF
-
-fi
-
-echo "$as_me:$LINENO: checking for inline" >&5
-echo $ECHO_N "checking for inline... $ECHO_C" >&6
-if test "${ac_cv_c_inline+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_c_inline=no
-for ac_kw in inline __inline__ __inline; do
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#ifndef __cplusplus
-typedef int foo_t;
-static $ac_kw foo_t static_foo () {return 0; }
-$ac_kw foo_t foo () {return 0; }
-#endif
-
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_c_inline=$ac_kw; break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-done
-
-fi
-echo "$as_me:$LINENO: result: $ac_cv_c_inline" >&5
-echo "${ECHO_T}$ac_cv_c_inline" >&6
-case $ac_cv_c_inline in
- inline | yes) ;;
- no)
-cat >>confdefs.h <<\_ACEOF
-#define inline
-_ACEOF
- ;;
- *) cat >>confdefs.h <<_ACEOF
-#define inline $ac_cv_c_inline
-_ACEOF
- ;;
-esac
-
-echo "$as_me:$LINENO: checking for size_t" >&5
-echo $ECHO_N "checking for size_t... $ECHO_C" >&6
-if test "${ac_cv_type_size_t+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-#line $LINENO "configure"
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-int
-main ()
-{
-if ((size_t *) 0)
- return 0;
-if (sizeof (size_t))
- return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_type_size_t=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_type_size_t=no
-fi
-rm -f conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_type_size_t" >&5
-echo "${ECHO_T}$ac_cv_type_size_t" >&6
-if test $ac_cv_type_size_t = yes; then
- :
-else
-
-cat >>confdefs.h <<_ACEOF
-#define size_t unsigned
-_ACEOF
-
-fi
-
-
-
-
- ac_config_files="$ac_config_files Makefile src/Makefile man/Makefile"
-cat >confcache <<\_ACEOF
-# This file is a shell script that caches the results of configure
-# tests run on this system so they can be shared between configure
-# scripts and configure runs, see configure's option --config-cache.
-# It is not useful on other systems. If it contains results you don't
-# want to keep, you may remove or edit it.
-#
-# config.status only pays attention to the cache file if you give it
-# the --recheck option to rerun configure.
-#
-# `ac_cv_env_foo' variables (set or unset) will be overridden when
-# loading this file, other *unset* `ac_cv_foo' will be assigned the
-# following values.
-
-_ACEOF
-
-# The following way of writing the cache mishandles newlines in values,
-# but we know of no workaround that is simple, portable, and efficient.
-# So, don't put newlines in cache variables' values.
-# Ultrix sh set writes to stderr and can't be redirected directly,
-# and sets the high bit in the cache file unless we assign to the vars.
-{
- (set) 2>&1 |
- case `(ac_space=' '; set | grep ac_space) 2>&1` in
- *ac_space=\ *)
- # `set' does not quote correctly, so add quotes (double-quote
- # substitution turns \\\\ into \\, and sed turns \\ into \).
- sed -n \
- "s/'/'\\\\''/g;
- s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='\\2'/p"
- ;;
- *)
- # `set' quotes correctly as required by POSIX, so do not add quotes.
- sed -n \
- "s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1=\\2/p"
- ;;
- esac;
-} |
- sed '
- t clear
- : clear
- s/^\([^=]*\)=\(.*[{}].*\)$/test "${\1+set}" = set || &/
- t end
- /^ac_cv_env/!s/^\([^=]*\)=\(.*\)$/\1=${\1=\2}/
- : end' >>confcache
-if diff $cache_file confcache >/dev/null 2>&1; then :; else
- if test -w $cache_file; then
- test "x$cache_file" != "x/dev/null" && echo "updating cache $cache_file"
- cat confcache >$cache_file
- else
- echo "not updating unwritable cache $cache_file"
- fi
-fi
-rm -f confcache
-
-test "x$prefix" = xNONE && prefix=$ac_default_prefix
-# Let make expand exec_prefix.
-test "x$exec_prefix" = xNONE && exec_prefix='${prefix}'
-
-# VPATH may cause trouble with some makes, so we remove $(srcdir),
-# ${srcdir} and @srcdir@ from VPATH if srcdir is ".", strip leading and
-# trailing colons and then remove the whole line if VPATH becomes empty
-# (actually we leave an empty line to preserve line numbers).
-if test "x$srcdir" = x.; then
- ac_vpsub='/^[ ]*VPATH[ ]*=/{
-s/:*\$(srcdir):*/:/;
-s/:*\${srcdir}:*/:/;
-s/:*@srcdir@:*/:/;
-s/^\([^=]*=[ ]*\):*/\1/;
-s/:*$//;
-s/^[^=]*=[ ]*$//;
-}'
-fi
-
-DEFS=-DHAVE_CONFIG_H
-
-ac_libobjs=
-ac_ltlibobjs=
-for ac_i in : $LIBOBJS; do test "x$ac_i" = x: && continue
- # 1. Remove the extension, and $U if already installed.
- ac_i=`echo "$ac_i" |
- sed 's/\$U\././;s/\.o$//;s/\.obj$//'`
- # 2. Add them.
- ac_libobjs="$ac_libobjs $ac_i\$U.$ac_objext"
- ac_ltlibobjs="$ac_ltlibobjs $ac_i"'$U.lo'
-done
-LIBOBJS=$ac_libobjs
-
-LTLIBOBJS=$ac_ltlibobjs
-
-
-if test -z "${AMDEP_TRUE}" && test -z "${AMDEP_FALSE}"; then
- { { echo "$as_me:$LINENO: error: conditional \"AMDEP\" was never defined.
-Usually this means the macro was only invoked conditionally." >&5
-echo "$as_me: error: conditional \"AMDEP\" was never defined.
-Usually this means the macro was only invoked conditionally." >&2;}
- { (exit 1); exit 1; }; }
-fi
-if test -z "${am__fastdepCC_TRUE}" && test -z "${am__fastdepCC_FALSE}"; then
- { { echo "$as_me:$LINENO: error: conditional \"am__fastdepCC\" was never defined.
-Usually this means the macro was only invoked conditionally." >&5
-echo "$as_me: error: conditional \"am__fastdepCC\" was never defined.
-Usually this means the macro was only invoked conditionally." >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-: ${CONFIG_STATUS=./config.status}
-ac_clean_files_save=$ac_clean_files
-ac_clean_files="$ac_clean_files $CONFIG_STATUS"
-{ echo "$as_me:$LINENO: creating $CONFIG_STATUS" >&5
-echo "$as_me: creating $CONFIG_STATUS" >&6;}
-cat >$CONFIG_STATUS <<_ACEOF
-#! $SHELL
-# Generated by $as_me.
-# Run this file to recreate the current configuration.
-# Compiler output produced by configure, useful for debugging
-# configure, is in config.log if it exists.
-
-debug=false
-ac_cs_recheck=false
-ac_cs_silent=false
-SHELL=\${CONFIG_SHELL-$SHELL}
-_ACEOF
-
-cat >>$CONFIG_STATUS <<\_ACEOF
-## --------------------- ##
-## M4sh Initialization. ##
-## --------------------- ##
-
-# Be Bourne compatible
-if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
- emulate sh
- NULLCMD=:
- # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
- # is contrary to our usage. Disable this feature.
- alias -g '${1+"$@"}'='"$@"'
-elif test -n "${BASH_VERSION+set}" && (set -o posix) >/dev/null 2>&1; then
- set -o posix
-fi
-
-# Support unset when possible.
-if (FOO=FOO; unset FOO) >/dev/null 2>&1; then
- as_unset=unset
-else
- as_unset=false
-fi
-
-
-# Work around bugs in pre-3.0 UWIN ksh.
-$as_unset ENV MAIL MAILPATH
-PS1='$ '
-PS2='> '
-PS4='+ '
-
-# NLS nuisances.
-for as_var in \
- LANG LANGUAGE LC_ADDRESS LC_ALL LC_COLLATE LC_CTYPE LC_IDENTIFICATION \
- LC_MEASUREMENT LC_MESSAGES LC_MONETARY LC_NAME LC_NUMERIC LC_PAPER \
- LC_TELEPHONE LC_TIME
-do
- if (set +x; test -n "`(eval $as_var=C; export $as_var) 2>&1`"); then
- eval $as_var=C; export $as_var
- else
- $as_unset $as_var
- fi
-done
-
-# Required to use basename.
-if expr a : '\(a\)' >/dev/null 2>&1; then
- as_expr=expr
-else
- as_expr=false
-fi
-
-if (basename /) >/dev/null 2>&1 && test "X`basename / 2>&1`" = "X/"; then
- as_basename=basename
-else
- as_basename=false
-fi
-
-
-# Name of the executable.
-as_me=`$as_basename "$0" ||
-$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
- X"$0" : 'X\(//\)$' \| \
- X"$0" : 'X\(/\)$' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X/"$0" |
- sed '/^.*\/\([^/][^/]*\)\/*$/{ s//\1/; q; }
- /^X\/\(\/\/\)$/{ s//\1/; q; }
- /^X\/\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
-
-
-# PATH needs CR, and LINENO needs CR and PATH.
-# Avoid depending upon Character Ranges.
-as_cr_letters='abcdefghijklmnopqrstuvwxyz'
-as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
-as_cr_Letters=$as_cr_letters$as_cr_LETTERS
-as_cr_digits='0123456789'
-as_cr_alnum=$as_cr_Letters$as_cr_digits
-
-# The user is always right.
-if test "${PATH_SEPARATOR+set}" != set; then
- echo "#! /bin/sh" >conf$$.sh
- echo "exit 0" >>conf$$.sh
- chmod +x conf$$.sh
- if (PATH="/nonexistent;."; conf$$.sh) >/dev/null 2>&1; then
- PATH_SEPARATOR=';'
- else
- PATH_SEPARATOR=:
- fi
- rm -f conf$$.sh
-fi
-
-
- as_lineno_1=$LINENO
- as_lineno_2=$LINENO
- as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
- test "x$as_lineno_1" != "x$as_lineno_2" &&
- test "x$as_lineno_3" = "x$as_lineno_2" || {
- # Find who we are. Look in the path if we contain no path at all
- # relative or not.
- case $0 in
- *[\\/]* ) as_myself=$0 ;;
- *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
-done
-
- ;;
- esac
- # We did not find ourselves, most probably we were run as `sh COMMAND'
- # in which case we are not to be found in the path.
- if test "x$as_myself" = x; then
- as_myself=$0
- fi
- if test ! -f "$as_myself"; then
- { { echo "$as_me:$LINENO: error: cannot find myself; rerun with an absolute path" >&5
-echo "$as_me: error: cannot find myself; rerun with an absolute path" >&2;}
- { (exit 1); exit 1; }; }
- fi
- case $CONFIG_SHELL in
- '')
- as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in /bin$PATH_SEPARATOR/usr/bin$PATH_SEPARATOR$PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for as_base in sh bash ksh sh5; do
- case $as_dir in
- /*)
- if ("$as_dir/$as_base" -c '
- as_lineno_1=$LINENO
- as_lineno_2=$LINENO
- as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
- test "x$as_lineno_1" != "x$as_lineno_2" &&
- test "x$as_lineno_3" = "x$as_lineno_2" ') 2>/dev/null; then
- $as_unset BASH_ENV || test "${BASH_ENV+set}" != set || { BASH_ENV=; export BASH_ENV; }
- $as_unset ENV || test "${ENV+set}" != set || { ENV=; export ENV; }
- CONFIG_SHELL=$as_dir/$as_base
- export CONFIG_SHELL
- exec "$CONFIG_SHELL" "$0" ${1+"$@"}
- fi;;
- esac
- done
-done
-;;
- esac
-
- # Create $as_me.lineno as a copy of $as_myself, but with $LINENO
- # uniformly replaced by the line number. The first 'sed' inserts a
- # line-number line before each line; the second 'sed' does the real
- # work. The second script uses 'N' to pair each line-number line
- # with the numbered line, and appends trailing '-' during
- # substitution so that $LINENO is not a special case at line end.
- # (Raja R Harinath suggested sed '=', and Paul Eggert wrote the
- # second 'sed' script. Blame Lee E. McMahon for sed's syntax. :-)
- sed '=' <$as_myself |
- sed '
- N
- s,$,-,
- : loop
- s,^\(['$as_cr_digits']*\)\(.*\)[$]LINENO\([^'$as_cr_alnum'_]\),\1\2\1\3,
- t loop
- s,-$,,
- s,^['$as_cr_digits']*\n,,
- ' >$as_me.lineno &&
- chmod +x $as_me.lineno ||
- { { echo "$as_me:$LINENO: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&5
-echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2;}
- { (exit 1); exit 1; }; }
-
- # Don't try to exec as it changes $[0], causing all sort of problems
- # (the dirname of $[0] is not the place where we might find the
- # original and so on. Autoconf is especially sensible to this).
- . ./$as_me.lineno
- # Exit status is that of the last command.
- exit
-}
-
-
-case `echo "testing\c"; echo 1,2,3`,`echo -n testing; echo 1,2,3` in
- *c*,-n*) ECHO_N= ECHO_C='
-' ECHO_T=' ' ;;
- *c*,* ) ECHO_N=-n ECHO_C= ECHO_T= ;;
- *) ECHO_N= ECHO_C='\c' ECHO_T= ;;
-esac
-
-if expr a : '\(a\)' >/dev/null 2>&1; then
- as_expr=expr
-else
- as_expr=false
-fi
-
-rm -f conf$$ conf$$.exe conf$$.file
-echo >conf$$.file
-if ln -s conf$$.file conf$$ 2>/dev/null; then
- # We could just check for DJGPP; but this test a) works b) is more generic
- # and c) will remain valid once DJGPP supports symlinks (DJGPP 2.04).
- if test -f conf$$.exe; then
- # Don't use ln at all; we don't have any links
- as_ln_s='cp -p'
- else
- as_ln_s='ln -s'
- fi
-elif ln conf$$.file conf$$ 2>/dev/null; then
- as_ln_s=ln
-else
- as_ln_s='cp -p'
-fi
-rm -f conf$$ conf$$.exe conf$$.file
-
-if mkdir -p . 2>/dev/null; then
- as_mkdir_p=:
-else
- as_mkdir_p=false
-fi
-
-as_executable_p="test -f"
-
-# Sed expression to map a string onto a valid CPP name.
-as_tr_cpp="sed y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g"
-
-# Sed expression to map a string onto a valid variable name.
-as_tr_sh="sed y%*+%pp%;s%[^_$as_cr_alnum]%_%g"
-
-
-# IFS
-# We need space, tab and new line, in precisely that order.
-as_nl='
-'
-IFS=" $as_nl"
-
-# CDPATH.
-$as_unset CDPATH
-
-exec 6>&1
-
-# Open the log real soon, to keep \$[0] and so on meaningful, and to
-# report actual input values of CONFIG_FILES etc. instead of their
-# values after options handling. Logging --version etc. is OK.
-exec 5>>config.log
-{
- echo
- sed 'h;s/./-/g;s/^.../## /;s/...$/ ##/;p;x;p;x' <<_ASBOX
-## Running $as_me. ##
-_ASBOX
-} >&5
-cat >&5 <<_CSEOF
-
-This file was extended by RNAhybrid $as_me 1.0, which was
-generated by GNU Autoconf 2.57. Invocation command line was
-
- CONFIG_FILES = $CONFIG_FILES
- CONFIG_HEADERS = $CONFIG_HEADERS
- CONFIG_LINKS = $CONFIG_LINKS
- CONFIG_COMMANDS = $CONFIG_COMMANDS
- $ $0 $@
-
-_CSEOF
-echo "on `(hostname || uname -n) 2>/dev/null | sed 1q`" >&5
-echo >&5
-_ACEOF
-
-# Files that config.status was made for.
-if test -n "$ac_config_files"; then
- echo "config_files=\"$ac_config_files\"" >>$CONFIG_STATUS
-fi
-
-if test -n "$ac_config_headers"; then
- echo "config_headers=\"$ac_config_headers\"" >>$CONFIG_STATUS
-fi
-
-if test -n "$ac_config_links"; then
- echo "config_links=\"$ac_config_links\"" >>$CONFIG_STATUS
-fi
-
-if test -n "$ac_config_commands"; then
- echo "config_commands=\"$ac_config_commands\"" >>$CONFIG_STATUS
-fi
-
-cat >>$CONFIG_STATUS <<\_ACEOF
-
-ac_cs_usage="\
-\`$as_me' instantiates files from templates according to the
-current configuration.
-
-Usage: $0 [OPTIONS] [FILE]...
-
- -h, --help print this help, then exit
- -V, --version print version number, then exit
- -q, --quiet do not print progress messages
- -d, --debug don't remove temporary files
- --recheck update $as_me by reconfiguring in the same conditions
- --file=FILE[:TEMPLATE]
- instantiate the configuration file FILE
- --header=FILE[:TEMPLATE]
- instantiate the configuration header FILE
-
-Configuration files:
-$config_files
-
-Configuration headers:
-$config_headers
-
-Configuration commands:
-$config_commands
-
-Report bugs to <bug-autoconf at gnu.org>."
-_ACEOF
-
-cat >>$CONFIG_STATUS <<_ACEOF
-ac_cs_version="\\
-RNAhybrid config.status 1.0
-configured by $0, generated by GNU Autoconf 2.57,
- with options \\"`echo "$ac_configure_args" | sed 's/[\\""\`\$]/\\\\&/g'`\\"
-
-Copyright 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001
-Free Software Foundation, Inc.
-This config.status script is free software; the Free Software Foundation
-gives unlimited permission to copy, distribute and modify it."
-srcdir=$srcdir
-INSTALL="$INSTALL"
-_ACEOF
-
-cat >>$CONFIG_STATUS <<\_ACEOF
-# If no file are specified by the user, then we need to provide default
-# value. By we need to know if files were specified by the user.
-ac_need_defaults=:
-while test $# != 0
-do
- case $1 in
- --*=*)
- ac_option=`expr "x$1" : 'x\([^=]*\)='`
- ac_optarg=`expr "x$1" : 'x[^=]*=\(.*\)'`
- ac_shift=:
- ;;
- -*)
- ac_option=$1
- ac_optarg=$2
- ac_shift=shift
- ;;
- *) # This is not an option, so the user has probably given explicit
- # arguments.
- ac_option=$1
- ac_need_defaults=false;;
- esac
-
- case $ac_option in
- # Handling of the options.
-_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
- -recheck | --recheck | --rechec | --reche | --rech | --rec | --re | --r)
- ac_cs_recheck=: ;;
- --version | --vers* | -V )
- echo "$ac_cs_version"; exit 0 ;;
- --he | --h)
- # Conflict between --help and --header
- { { echo "$as_me:$LINENO: error: ambiguous option: $1
-Try \`$0 --help' for more information." >&5
-echo "$as_me: error: ambiguous option: $1
-Try \`$0 --help' for more information." >&2;}
- { (exit 1); exit 1; }; };;
- --help | --hel | -h )
- echo "$ac_cs_usage"; exit 0 ;;
- --debug | --d* | -d )
- debug=: ;;
- --file | --fil | --fi | --f )
- $ac_shift
- CONFIG_FILES="$CONFIG_FILES $ac_optarg"
- ac_need_defaults=false;;
- --header | --heade | --head | --hea )
- $ac_shift
- CONFIG_HEADERS="$CONFIG_HEADERS $ac_optarg"
- ac_need_defaults=false;;
- -q | -quiet | --quiet | --quie | --qui | --qu | --q \
- | -silent | --silent | --silen | --sile | --sil | --si | --s)
- ac_cs_silent=: ;;
-
- # This is an error.
- -*) { { echo "$as_me:$LINENO: error: unrecognized option: $1
-Try \`$0 --help' for more information." >&5
-echo "$as_me: error: unrecognized option: $1
-Try \`$0 --help' for more information." >&2;}
- { (exit 1); exit 1; }; } ;;
-
- *) ac_config_targets="$ac_config_targets $1" ;;
-
- esac
- shift
-done
-
-ac_configure_extra_args=
-
-if $ac_cs_silent; then
- exec 6>/dev/null
- ac_configure_extra_args="$ac_configure_extra_args --silent"
-fi
-
-_ACEOF
-cat >>$CONFIG_STATUS <<_ACEOF
-if \$ac_cs_recheck; then
- echo "running $SHELL $0 " $ac_configure_args \$ac_configure_extra_args " --no-create --no-recursion" >&6
- exec $SHELL $0 $ac_configure_args \$ac_configure_extra_args --no-create --no-recursion
-fi
-
-_ACEOF
-
-cat >>$CONFIG_STATUS <<_ACEOF
-#
-# INIT-COMMANDS section.
-#
-
-AMDEP_TRUE="$AMDEP_TRUE" ac_aux_dir="$ac_aux_dir"
-
-_ACEOF
-
-
-
-cat >>$CONFIG_STATUS <<\_ACEOF
-for ac_config_target in $ac_config_targets
-do
- case "$ac_config_target" in
- # Handling of arguments.
- "Makefile" ) CONFIG_FILES="$CONFIG_FILES Makefile" ;;
- "src/Makefile" ) CONFIG_FILES="$CONFIG_FILES src/Makefile" ;;
- "man/Makefile" ) CONFIG_FILES="$CONFIG_FILES man/Makefile" ;;
- "depfiles" ) CONFIG_COMMANDS="$CONFIG_COMMANDS depfiles" ;;
- "config.h" ) CONFIG_HEADERS="$CONFIG_HEADERS config.h" ;;
- *) { { echo "$as_me:$LINENO: error: invalid argument: $ac_config_target" >&5
-echo "$as_me: error: invalid argument: $ac_config_target" >&2;}
- { (exit 1); exit 1; }; };;
- esac
-done
-
-# If the user did not use the arguments to specify the items to instantiate,
-# then the envvar interface is used. Set only those that are not.
-# We use the long form for the default assignment because of an extremely
-# bizarre bug on SunOS 4.1.3.
-if $ac_need_defaults; then
- test "${CONFIG_FILES+set}" = set || CONFIG_FILES=$config_files
- test "${CONFIG_HEADERS+set}" = set || CONFIG_HEADERS=$config_headers
- test "${CONFIG_COMMANDS+set}" = set || CONFIG_COMMANDS=$config_commands
-fi
-
-# Have a temporary directory for convenience. Make it in the build tree
-# simply because there is no reason to put it here, and in addition,
-# creating and moving files from /tmp can sometimes cause problems.
-# Create a temporary directory, and hook for its removal unless debugging.
-$debug ||
-{
- trap 'exit_status=$?; rm -rf $tmp && exit $exit_status' 0
- trap '{ (exit 1); exit 1; }' 1 2 13 15
-}
-
-# Create a (secure) tmp directory for tmp files.
-
-{
- tmp=`(umask 077 && mktemp -d -q "./confstatXXXXXX") 2>/dev/null` &&
- test -n "$tmp" && test -d "$tmp"
-} ||
-{
- tmp=./confstat$$-$RANDOM
- (umask 077 && mkdir $tmp)
-} ||
-{
- echo "$me: cannot create a temporary directory in ." >&2
- { (exit 1); exit 1; }
-}
-
-_ACEOF
-
-cat >>$CONFIG_STATUS <<_ACEOF
-
-#
-# CONFIG_FILES section.
-#
-
-# No need to generate the scripts if there are no CONFIG_FILES.
-# This happens for instance when ./config.status config.h
-if test -n "\$CONFIG_FILES"; then
- # Protect against being on the right side of a sed subst in config.status.
- sed 's/,@/@@/; s/@,/@@/; s/,;t t\$/@;t t/; /@;t t\$/s/[\\\\&,]/\\\\&/g;
- s/@@/,@/; s/@@/@,/; s/@;t t\$/,;t t/' >\$tmp/subs.sed <<\\CEOF
-s, at SHELL@,$SHELL,;t t
-s, at PATH_SEPARATOR@,$PATH_SEPARATOR,;t t
-s, at PACKAGE_NAME@,$PACKAGE_NAME,;t t
-s, at PACKAGE_TARNAME@,$PACKAGE_TARNAME,;t t
-s, at PACKAGE_VERSION@,$PACKAGE_VERSION,;t t
-s, at PACKAGE_STRING@,$PACKAGE_STRING,;t t
-s, at PACKAGE_BUGREPORT@,$PACKAGE_BUGREPORT,;t t
-s, at exec_prefix@,$exec_prefix,;t t
-s, at prefix@,$prefix,;t t
-s, at program_transform_name@,$program_transform_name,;t t
-s, at bindir@,$bindir,;t t
-s, at sbindir@,$sbindir,;t t
-s, at libexecdir@,$libexecdir,;t t
-s, at datadir@,$datadir,;t t
-s, at sysconfdir@,$sysconfdir,;t t
-s, at sharedstatedir@,$sharedstatedir,;t t
-s, at localstatedir@,$localstatedir,;t t
-s, at libdir@,$libdir,;t t
-s, at includedir@,$includedir,;t t
-s, at oldincludedir@,$oldincludedir,;t t
-s, at infodir@,$infodir,;t t
-s, at mandir@,$mandir,;t t
-s, at build_alias@,$build_alias,;t t
-s, at host_alias@,$host_alias,;t t
-s, at target_alias@,$target_alias,;t t
-s, at DEFS@,$DEFS,;t t
-s, at ECHO_C@,$ECHO_C,;t t
-s, at ECHO_N@,$ECHO_N,;t t
-s, at ECHO_T@,$ECHO_T,;t t
-s, at LIBS@,$LIBS,;t t
-s, at INSTALL_PROGRAM@,$INSTALL_PROGRAM,;t t
-s, at INSTALL_SCRIPT@,$INSTALL_SCRIPT,;t t
-s, at INSTALL_DATA@,$INSTALL_DATA,;t t
-s, at CYGPATH_W@,$CYGPATH_W,;t t
-s, at PACKAGE@,$PACKAGE,;t t
-s, at VERSION@,$VERSION,;t t
-s, at ACLOCAL@,$ACLOCAL,;t t
-s, at AUTOCONF@,$AUTOCONF,;t t
-s, at AUTOMAKE@,$AUTOMAKE,;t t
-s, at AUTOHEADER@,$AUTOHEADER,;t t
-s, at MAKEINFO@,$MAKEINFO,;t t
-s, at AMTAR@,$AMTAR,;t t
-s, at install_sh@,$install_sh,;t t
-s, at STRIP@,$STRIP,;t t
-s, at ac_ct_STRIP@,$ac_ct_STRIP,;t t
-s, at INSTALL_STRIP_PROGRAM@,$INSTALL_STRIP_PROGRAM,;t t
-s, at AWK@,$AWK,;t t
-s, at SET_MAKE@,$SET_MAKE,;t t
-s, at am__leading_dot@,$am__leading_dot,;t t
-s, at CC@,$CC,;t t
-s, at CFLAGS@,$CFLAGS,;t t
-s, at LDFLAGS@,$LDFLAGS,;t t
-s, at CPPFLAGS@,$CPPFLAGS,;t t
-s, at ac_ct_CC@,$ac_ct_CC,;t t
-s, at EXEEXT@,$EXEEXT,;t t
-s, at OBJEXT@,$OBJEXT,;t t
-s, at DEPDIR@,$DEPDIR,;t t
-s, at am__include@,$am__include,;t t
-s, at am__quote@,$am__quote,;t t
-s, at AMDEP_TRUE@,$AMDEP_TRUE,;t t
-s, at AMDEP_FALSE@,$AMDEP_FALSE,;t t
-s, at AMDEPBACKSLASH@,$AMDEPBACKSLASH,;t t
-s, at CCDEPMODE@,$CCDEPMODE,;t t
-s, at am__fastdepCC_TRUE@,$am__fastdepCC_TRUE,;t t
-s, at am__fastdepCC_FALSE@,$am__fastdepCC_FALSE,;t t
-s, at CPP@,$CPP,;t t
-s, at EGREP@,$EGREP,;t t
-s, at LIBOBJS@,$LIBOBJS,;t t
-s, at LTLIBOBJS@,$LTLIBOBJS,;t t
-CEOF
-
-_ACEOF
-
- cat >>$CONFIG_STATUS <<\_ACEOF
- # Split the substitutions into bite-sized pieces for seds with
- # small command number limits, like on Digital OSF/1 and HP-UX.
- ac_max_sed_lines=48
- ac_sed_frag=1 # Number of current file.
- ac_beg=1 # First line for current file.
- ac_end=$ac_max_sed_lines # Line after last line for current file.
- ac_more_lines=:
- ac_sed_cmds=
- while $ac_more_lines; do
- if test $ac_beg -gt 1; then
- sed "1,${ac_beg}d; ${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
- else
- sed "${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
- fi
- if test ! -s $tmp/subs.frag; then
- ac_more_lines=false
- else
- # The purpose of the label and of the branching condition is to
- # speed up the sed processing (if there are no `@' at all, there
- # is no need to browse any of the substitutions).
- # These are the two extra sed commands mentioned above.
- (echo ':t
- /@[a-zA-Z_][a-zA-Z_0-9]*@/!b' && cat $tmp/subs.frag) >$tmp/subs-$ac_sed_frag.sed
- if test -z "$ac_sed_cmds"; then
- ac_sed_cmds="sed -f $tmp/subs-$ac_sed_frag.sed"
- else
- ac_sed_cmds="$ac_sed_cmds | sed -f $tmp/subs-$ac_sed_frag.sed"
- fi
- ac_sed_frag=`expr $ac_sed_frag + 1`
- ac_beg=$ac_end
- ac_end=`expr $ac_end + $ac_max_sed_lines`
- fi
- done
- if test -z "$ac_sed_cmds"; then
- ac_sed_cmds=cat
- fi
-fi # test -n "$CONFIG_FILES"
-
-_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-for ac_file in : $CONFIG_FILES; do test "x$ac_file" = x: && continue
- # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
- case $ac_file in
- - | *:- | *:-:* ) # input from stdin
- cat >$tmp/stdin
- ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
- ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
- *:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
- ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
- * ) ac_file_in=$ac_file.in ;;
- esac
-
- # Compute @srcdir@, @top_srcdir@, and @INSTALL@ for subdirectories.
- ac_dir=`(dirname "$ac_file") 2>/dev/null ||
-$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$ac_file" : 'X\(//\)[^/]' \| \
- X"$ac_file" : 'X\(//\)$' \| \
- X"$ac_file" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$ac_file" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- { if $as_mkdir_p; then
- mkdir -p "$ac_dir"
- else
- as_dir="$ac_dir"
- as_dirs=
- while test ! -d "$as_dir"; do
- as_dirs="$as_dir $as_dirs"
- as_dir=`(dirname "$as_dir") 2>/dev/null ||
-$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$as_dir" : 'X\(//\)[^/]' \| \
- X"$as_dir" : 'X\(//\)$' \| \
- X"$as_dir" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- done
- test ! -n "$as_dirs" || mkdir $as_dirs
- fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
-echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
- { (exit 1); exit 1; }; }; }
-
- ac_builddir=.
-
-if test "$ac_dir" != .; then
- ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
- # A "../" for each directory in $ac_dir_suffix.
- ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
-else
- ac_dir_suffix= ac_top_builddir=
-fi
-
-case $srcdir in
- .) # No --srcdir option. We are building in place.
- ac_srcdir=.
- if test -z "$ac_top_builddir"; then
- ac_top_srcdir=.
- else
- ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
- fi ;;
- [\\/]* | ?:[\\/]* ) # Absolute path.
- ac_srcdir=$srcdir$ac_dir_suffix;
- ac_top_srcdir=$srcdir ;;
- *) # Relative path.
- ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
- ac_top_srcdir=$ac_top_builddir$srcdir ;;
-esac
-# Don't blindly perform a `cd "$ac_dir"/$ac_foo && pwd` since $ac_foo can be
-# absolute.
-ac_abs_builddir=`cd "$ac_dir" && cd $ac_builddir && pwd`
-ac_abs_top_builddir=`cd "$ac_dir" && cd ${ac_top_builddir}. && pwd`
-ac_abs_srcdir=`cd "$ac_dir" && cd $ac_srcdir && pwd`
-ac_abs_top_srcdir=`cd "$ac_dir" && cd $ac_top_srcdir && pwd`
-
-
- case $INSTALL in
- [\\/$]* | ?:[\\/]* ) ac_INSTALL=$INSTALL ;;
- *) ac_INSTALL=$ac_top_builddir$INSTALL ;;
- esac
-
- if test x"$ac_file" != x-; then
- { echo "$as_me:$LINENO: creating $ac_file" >&5
-echo "$as_me: creating $ac_file" >&6;}
- rm -f "$ac_file"
- fi
- # Let's still pretend it is `configure' which instantiates (i.e., don't
- # use $as_me), people would be surprised to read:
- # /* config.h. Generated by config.status. */
- if test x"$ac_file" = x-; then
- configure_input=
- else
- configure_input="$ac_file. "
- fi
- configure_input=$configure_input"Generated from `echo $ac_file_in |
- sed 's,.*/,,'` by configure."
-
- # First look for the input files in the build tree, otherwise in the
- # src tree.
- ac_file_inputs=`IFS=:
- for f in $ac_file_in; do
- case $f in
- -) echo $tmp/stdin ;;
- [\\/$]*)
- # Absolute (can't be DOS-style, as IFS=:)
- test -f "$f" || { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
-echo "$as_me: error: cannot find input file: $f" >&2;}
- { (exit 1); exit 1; }; }
- echo $f;;
- *) # Relative
- if test -f "$f"; then
- # Build tree
- echo $f
- elif test -f "$srcdir/$f"; then
- # Source tree
- echo $srcdir/$f
- else
- # /dev/null tree
- { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
-echo "$as_me: error: cannot find input file: $f" >&2;}
- { (exit 1); exit 1; }; }
- fi;;
- esac
- done` || { (exit 1); exit 1; }
-_ACEOF
-cat >>$CONFIG_STATUS <<_ACEOF
- sed "$ac_vpsub
-$extrasub
-_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-:t
-/@[a-zA-Z_][a-zA-Z_0-9]*@/!b
-s, at configure_input@,$configure_input,;t t
-s, at srcdir@,$ac_srcdir,;t t
-s, at abs_srcdir@,$ac_abs_srcdir,;t t
-s, at top_srcdir@,$ac_top_srcdir,;t t
-s, at abs_top_srcdir@,$ac_abs_top_srcdir,;t t
-s, at builddir@,$ac_builddir,;t t
-s, at abs_builddir@,$ac_abs_builddir,;t t
-s, at top_builddir@,$ac_top_builddir,;t t
-s, at abs_top_builddir@,$ac_abs_top_builddir,;t t
-s, at INSTALL@,$ac_INSTALL,;t t
-" $ac_file_inputs | (eval "$ac_sed_cmds") >$tmp/out
- rm -f $tmp/stdin
- if test x"$ac_file" != x-; then
- mv $tmp/out $ac_file
- else
- cat $tmp/out
- rm -f $tmp/out
- fi
-
-done
-_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-
-#
-# CONFIG_HEADER section.
-#
-
-# These sed commands are passed to sed as "A NAME B NAME C VALUE D", where
-# NAME is the cpp macro being defined and VALUE is the value it is being given.
-#
-# ac_d sets the value in "#define NAME VALUE" lines.
-ac_dA='s,^\([ ]*\)#\([ ]*define[ ][ ]*\)'
-ac_dB='[ ].*$,\1#\2'
-ac_dC=' '
-ac_dD=',;t'
-# ac_u turns "#undef NAME" without trailing blanks into "#define NAME VALUE".
-ac_uA='s,^\([ ]*\)#\([ ]*\)undef\([ ][ ]*\)'
-ac_uB='$,\1#\2define\3'
-ac_uC=' '
-ac_uD=',;t'
-
-for ac_file in : $CONFIG_HEADERS; do test "x$ac_file" = x: && continue
- # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
- case $ac_file in
- - | *:- | *:-:* ) # input from stdin
- cat >$tmp/stdin
- ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
- ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
- *:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
- ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
- * ) ac_file_in=$ac_file.in ;;
- esac
-
- test x"$ac_file" != x- && { echo "$as_me:$LINENO: creating $ac_file" >&5
-echo "$as_me: creating $ac_file" >&6;}
-
- # First look for the input files in the build tree, otherwise in the
- # src tree.
- ac_file_inputs=`IFS=:
- for f in $ac_file_in; do
- case $f in
- -) echo $tmp/stdin ;;
- [\\/$]*)
- # Absolute (can't be DOS-style, as IFS=:)
- test -f "$f" || { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
-echo "$as_me: error: cannot find input file: $f" >&2;}
- { (exit 1); exit 1; }; }
- echo $f;;
- *) # Relative
- if test -f "$f"; then
- # Build tree
- echo $f
- elif test -f "$srcdir/$f"; then
- # Source tree
- echo $srcdir/$f
- else
- # /dev/null tree
- { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
-echo "$as_me: error: cannot find input file: $f" >&2;}
- { (exit 1); exit 1; }; }
- fi;;
- esac
- done` || { (exit 1); exit 1; }
- # Remove the trailing spaces.
- sed 's/[ ]*$//' $ac_file_inputs >$tmp/in
-
-_ACEOF
-
-# Transform confdefs.h into two sed scripts, `conftest.defines' and
-# `conftest.undefs', that substitutes the proper values into
-# config.h.in to produce config.h. The first handles `#define'
-# templates, and the second `#undef' templates.
-# And first: Protect against being on the right side of a sed subst in
-# config.status. Protect against being in an unquoted here document
-# in config.status.
-rm -f conftest.defines conftest.undefs
-# Using a here document instead of a string reduces the quoting nightmare.
-# Putting comments in sed scripts is not portable.
-#
-# `end' is used to avoid that the second main sed command (meant for
-# 0-ary CPP macros) applies to n-ary macro definitions.
-# See the Autoconf documentation for `clear'.
-cat >confdef2sed.sed <<\_ACEOF
-s/[\\&,]/\\&/g
-s,[\\$`],\\&,g
-t clear
-: clear
-s,^[ ]*#[ ]*define[ ][ ]*\([^ (][^ (]*\)\(([^)]*)\)[ ]*\(.*\)$,${ac_dA}\1${ac_dB}\1\2${ac_dC}\3${ac_dD},gp
-t end
-s,^[ ]*#[ ]*define[ ][ ]*\([^ ][^ ]*\)[ ]*\(.*\)$,${ac_dA}\1${ac_dB}\1${ac_dC}\2${ac_dD},gp
-: end
-_ACEOF
-# If some macros were called several times there might be several times
-# the same #defines, which is useless. Nevertheless, we may not want to
-# sort them, since we want the *last* AC-DEFINE to be honored.
-uniq confdefs.h | sed -n -f confdef2sed.sed >conftest.defines
-sed 's/ac_d/ac_u/g' conftest.defines >conftest.undefs
-rm -f confdef2sed.sed
-
-# This sed command replaces #undef with comments. This is necessary, for
-# example, in the case of _POSIX_SOURCE, which is predefined and required
-# on some systems where configure will not decide to define it.
-cat >>conftest.undefs <<\_ACEOF
-s,^[ ]*#[ ]*undef[ ][ ]*[a-zA-Z_][a-zA-Z_0-9]*,/* & */,
-_ACEOF
-
-# Break up conftest.defines because some shells have a limit on the size
-# of here documents, and old seds have small limits too (100 cmds).
-echo ' # Handle all the #define templates only if necessary.' >>$CONFIG_STATUS
-echo ' if grep "^[ ]*#[ ]*define" $tmp/in >/dev/null; then' >>$CONFIG_STATUS
-echo ' # If there are no defines, we may have an empty if/fi' >>$CONFIG_STATUS
-echo ' :' >>$CONFIG_STATUS
-rm -f conftest.tail
-while grep . conftest.defines >/dev/null
-do
- # Write a limited-size here document to $tmp/defines.sed.
- echo ' cat >$tmp/defines.sed <<CEOF' >>$CONFIG_STATUS
- # Speed up: don't consider the non `#define' lines.
- echo '/^[ ]*#[ ]*define/!b' >>$CONFIG_STATUS
- # Work around the forget-to-reset-the-flag bug.
- echo 't clr' >>$CONFIG_STATUS
- echo ': clr' >>$CONFIG_STATUS
- sed ${ac_max_here_lines}q conftest.defines >>$CONFIG_STATUS
- echo 'CEOF
- sed -f $tmp/defines.sed $tmp/in >$tmp/out
- rm -f $tmp/in
- mv $tmp/out $tmp/in
-' >>$CONFIG_STATUS
- sed 1,${ac_max_here_lines}d conftest.defines >conftest.tail
- rm -f conftest.defines
- mv conftest.tail conftest.defines
-done
-rm -f conftest.defines
-echo ' fi # grep' >>$CONFIG_STATUS
-echo >>$CONFIG_STATUS
-
-# Break up conftest.undefs because some shells have a limit on the size
-# of here documents, and old seds have small limits too (100 cmds).
-echo ' # Handle all the #undef templates' >>$CONFIG_STATUS
-rm -f conftest.tail
-while grep . conftest.undefs >/dev/null
-do
- # Write a limited-size here document to $tmp/undefs.sed.
- echo ' cat >$tmp/undefs.sed <<CEOF' >>$CONFIG_STATUS
- # Speed up: don't consider the non `#undef'
- echo '/^[ ]*#[ ]*undef/!b' >>$CONFIG_STATUS
- # Work around the forget-to-reset-the-flag bug.
- echo 't clr' >>$CONFIG_STATUS
- echo ': clr' >>$CONFIG_STATUS
- sed ${ac_max_here_lines}q conftest.undefs >>$CONFIG_STATUS
- echo 'CEOF
- sed -f $tmp/undefs.sed $tmp/in >$tmp/out
- rm -f $tmp/in
- mv $tmp/out $tmp/in
-' >>$CONFIG_STATUS
- sed 1,${ac_max_here_lines}d conftest.undefs >conftest.tail
- rm -f conftest.undefs
- mv conftest.tail conftest.undefs
-done
-rm -f conftest.undefs
-
-cat >>$CONFIG_STATUS <<\_ACEOF
- # Let's still pretend it is `configure' which instantiates (i.e., don't
- # use $as_me), people would be surprised to read:
- # /* config.h. Generated by config.status. */
- if test x"$ac_file" = x-; then
- echo "/* Generated by configure. */" >$tmp/config.h
- else
- echo "/* $ac_file. Generated by configure. */" >$tmp/config.h
- fi
- cat $tmp/in >>$tmp/config.h
- rm -f $tmp/in
- if test x"$ac_file" != x-; then
- if diff $ac_file $tmp/config.h >/dev/null 2>&1; then
- { echo "$as_me:$LINENO: $ac_file is unchanged" >&5
-echo "$as_me: $ac_file is unchanged" >&6;}
- else
- ac_dir=`(dirname "$ac_file") 2>/dev/null ||
-$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$ac_file" : 'X\(//\)[^/]' \| \
- X"$ac_file" : 'X\(//\)$' \| \
- X"$ac_file" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$ac_file" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- { if $as_mkdir_p; then
- mkdir -p "$ac_dir"
- else
- as_dir="$ac_dir"
- as_dirs=
- while test ! -d "$as_dir"; do
- as_dirs="$as_dir $as_dirs"
- as_dir=`(dirname "$as_dir") 2>/dev/null ||
-$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$as_dir" : 'X\(//\)[^/]' \| \
- X"$as_dir" : 'X\(//\)$' \| \
- X"$as_dir" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- done
- test ! -n "$as_dirs" || mkdir $as_dirs
- fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
-echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
- { (exit 1); exit 1; }; }; }
-
- rm -f $ac_file
- mv $tmp/config.h $ac_file
- fi
- else
- cat $tmp/config.h
- rm -f $tmp/config.h
- fi
-# Compute $ac_file's index in $config_headers.
-_am_stamp_count=1
-for _am_header in $config_headers :; do
- case $_am_header in
- $ac_file | $ac_file:* )
- break ;;
- * )
- _am_stamp_count=`expr $_am_stamp_count + 1` ;;
- esac
-done
-echo "timestamp for $ac_file" >`(dirname $ac_file) 2>/dev/null ||
-$as_expr X$ac_file : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X$ac_file : 'X\(//\)[^/]' \| \
- X$ac_file : 'X\(//\)$' \| \
- X$ac_file : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X$ac_file |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`/stamp-h$_am_stamp_count
-done
-_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-
-#
-# CONFIG_COMMANDS section.
-#
-for ac_file in : $CONFIG_COMMANDS; do test "x$ac_file" = x: && continue
- ac_dest=`echo "$ac_file" | sed 's,:.*,,'`
- ac_source=`echo "$ac_file" | sed 's,[^:]*:,,'`
- ac_dir=`(dirname "$ac_dest") 2>/dev/null ||
-$as_expr X"$ac_dest" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$ac_dest" : 'X\(//\)[^/]' \| \
- X"$ac_dest" : 'X\(//\)$' \| \
- X"$ac_dest" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$ac_dest" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- ac_builddir=.
-
-if test "$ac_dir" != .; then
- ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
- # A "../" for each directory in $ac_dir_suffix.
- ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
-else
- ac_dir_suffix= ac_top_builddir=
-fi
-
-case $srcdir in
- .) # No --srcdir option. We are building in place.
- ac_srcdir=.
- if test -z "$ac_top_builddir"; then
- ac_top_srcdir=.
- else
- ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
- fi ;;
- [\\/]* | ?:[\\/]* ) # Absolute path.
- ac_srcdir=$srcdir$ac_dir_suffix;
- ac_top_srcdir=$srcdir ;;
- *) # Relative path.
- ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
- ac_top_srcdir=$ac_top_builddir$srcdir ;;
-esac
-# Don't blindly perform a `cd "$ac_dir"/$ac_foo && pwd` since $ac_foo can be
-# absolute.
-ac_abs_builddir=`cd "$ac_dir" && cd $ac_builddir && pwd`
-ac_abs_top_builddir=`cd "$ac_dir" && cd ${ac_top_builddir}. && pwd`
-ac_abs_srcdir=`cd "$ac_dir" && cd $ac_srcdir && pwd`
-ac_abs_top_srcdir=`cd "$ac_dir" && cd $ac_top_srcdir && pwd`
-
-
- { echo "$as_me:$LINENO: executing $ac_dest commands" >&5
-echo "$as_me: executing $ac_dest commands" >&6;}
- case $ac_dest in
- depfiles ) test x"$AMDEP_TRUE" != x"" || for mf in $CONFIG_FILES; do
- # Strip MF so we end up with the name of the file.
- mf=`echo "$mf" | sed -e 's/:.*$//'`
- # Check whether this is an Automake generated Makefile or not.
- # We used to match only the files named `Makefile.in', but
- # some people rename them; so instead we look at the file content.
- # Grep'ing the first line is not enough: some people post-process
- # each Makefile.in and add a new line on top of each file to say so.
- # So let's grep whole file.
- if grep '^#.*generated by automake' $mf > /dev/null 2>&1; then
- dirpart=`(dirname "$mf") 2>/dev/null ||
-$as_expr X"$mf" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$mf" : 'X\(//\)[^/]' \| \
- X"$mf" : 'X\(//\)$' \| \
- X"$mf" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$mf" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- else
- continue
- fi
- grep '^DEP_FILES *= *[^ #]' < "$mf" > /dev/null || continue
- # Extract the definition of DEP_FILES from the Makefile without
- # running `make'.
- DEPDIR=`sed -n -e '/^DEPDIR = / s///p' < "$mf"`
- test -z "$DEPDIR" && continue
- # When using ansi2knr, U may be empty or an underscore; expand it
- U=`sed -n -e '/^U = / s///p' < "$mf"`
- test -d "$dirpart/$DEPDIR" || mkdir "$dirpart/$DEPDIR"
- # We invoke sed twice because it is the simplest approach to
- # changing $(DEPDIR) to its actual value in the expansion.
- for file in `sed -n -e '
- /^DEP_FILES = .*\\\\$/ {
- s/^DEP_FILES = //
- :loop
- s/\\\\$//
- p
- n
- /\\\\$/ b loop
- p
- }
- /^DEP_FILES = / s/^DEP_FILES = //p' < "$mf" | \
- sed -e 's/\$(DEPDIR)/'"$DEPDIR"'/g' -e 's/\$U/'"$U"'/g'`; do
- # Make sure the directory exists.
- test -f "$dirpart/$file" && continue
- fdir=`(dirname "$file") 2>/dev/null ||
-$as_expr X"$file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$file" : 'X\(//\)[^/]' \| \
- X"$file" : 'X\(//\)$' \| \
- X"$file" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$file" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- { if $as_mkdir_p; then
- mkdir -p $dirpart/$fdir
- else
- as_dir=$dirpart/$fdir
- as_dirs=
- while test ! -d "$as_dir"; do
- as_dirs="$as_dir $as_dirs"
- as_dir=`(dirname "$as_dir") 2>/dev/null ||
-$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$as_dir" : 'X\(//\)[^/]' \| \
- X"$as_dir" : 'X\(//\)$' \| \
- X"$as_dir" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- done
- test ! -n "$as_dirs" || mkdir $as_dirs
- fi || { { echo "$as_me:$LINENO: error: cannot create directory $dirpart/$fdir" >&5
-echo "$as_me: error: cannot create directory $dirpart/$fdir" >&2;}
- { (exit 1); exit 1; }; }; }
-
- # echo "creating $dirpart/$file"
- echo '# dummy' > "$dirpart/$file"
- done
-done
- ;;
- esac
-done
-_ACEOF
-
-cat >>$CONFIG_STATUS <<\_ACEOF
-
-{ (exit 0); exit 0; }
-_ACEOF
-chmod +x $CONFIG_STATUS
-ac_clean_files=$ac_clean_files_save
-
-
-# configure is writing to config.log, and then calls config.status.
-# config.status does its own redirection, appending to config.log.
-# Unfortunately, on DOS this fails, as config.log is still kept open
-# by configure, so config.status won't be able to write to it; its
-# output is simply discarded. So we exec the FD to /dev/null,
-# effectively closing config.log, so it can be properly (re)opened and
-# appended to by config.status. When coming back to configure, we
-# need to make the FD available again.
-if test "$no_create" != yes; then
- ac_cs_success=:
- ac_config_status_args=
- test "$silent" = yes &&
- ac_config_status_args="$ac_config_status_args --quiet"
- exec 5>/dev/null
- $SHELL $CONFIG_STATUS $ac_config_status_args || ac_cs_success=false
- exec 5>>config.log
- # Use ||, not &&, to avoid exiting from the if with $? = 1, which
- # would make configure fail if this is the last instruction.
- $ac_cs_success || { (exit 1); exit 1; }
-fi
-
-
-
Deleted: trunk/packages/rnahybrid/trunk/configure.in
===================================================================
--- trunk/packages/rnahybrid/trunk/configure.in 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/configure.in 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,36 +0,0 @@
-dnl Process this file with autoconf to produce a configure script.
-AC_REVISION($Revision: 1.0 $)
-AC_INIT(RNAhybrid,1.0,marc at techfak.uni-bielefeld.de,RNAhybrid)
-AC_PREREQ(2.53)
-AM_INIT_AUTOMAKE
-
-dnl create a config.h file (Automake will add -DHAVE_CONFIG_H)
-AM_CONFIG_HEADER(config.h)
-
-dnl Checks for programs.
-dnl AC_PROG_CXX
-AC_PROG_CC
-AC_LANG(C)
-
-dnl Checks for libraries.
-AC_CHECK_LIB(m,log,,AC_MSG_ERROR(math library is missing))
-AC_CHECK_LIB(g2,g2_open_vd,,AC_MSG_WARN(libg2.a is missing. You can download it at http://g2.sourceforge.net/))
-AC_CHECK_LIB(gd,gdImageLine,,)
-
-dnl Checks for header files.
-AC_HEADER_STDC
-AC_CHECK_HEADER(g2.h,,)
-AC_CHECK_HEADER(g2_PS.h,,)
-
-dnl Checks for typedefs, structures, and compiler characteristics.
-AC_C_CONST
-AC_C_INLINE
-AC_TYPE_SIZE_T
-
-dnl AC_SUBST(CXX)
-
-dnl Checks for library functions.
-
-AC_OUTPUT(Makefile src/Makefile man/Makefile)
-
-
Property changes on: trunk/packages/rnahybrid/trunk/debian
___________________________________________________________________
Name: mergeWithUpstream
+ 1
Modified: trunk/packages/rnahybrid/trunk/debian/changelog
===================================================================
--- trunk/packages/rnahybrid/trunk/debian/changelog 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/debian/changelog 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,6 +1,4 @@
rnahybrid (2.1-1) unstable; urgency=low
- * Initial release (Closes: #426957)
+ -- Charles Plessy <charles-debian-nospam at plessy.org> Sun, 02 Sep 2007 10:56:37 +0900
- -- Charles Plessy <charles-debian-nospam at plessy.org> Fri, 1 Jun 2007 08:47:21 +0900
-
Modified: trunk/packages/rnahybrid/trunk/debian/copyright
===================================================================
--- trunk/packages/rnahybrid/trunk/debian/copyright 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/debian/copyright 2007-09-02 01:59:54 UTC (rev 415)
@@ -9,7 +9,7 @@
Matthias Hoechsmann (mhoechsm at techfak.uni-bielefeld.de)
-Copyright: Copyright © 2004 Marc Rehmsmeier, Peter Steffen, Matthias Hoechsmann.
+Copyright 2004 Marc Rehmsmeier, Peter Steffen, Matthias Hoechsmann.
License:
@@ -27,9 +27,21 @@
along with this package; if not, write to the Free Software
Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+
On Debian systems, the complete text of the GNU General
Public License can be found in `/usr/share/common-licenses/GPL'.
+
+The file mt19937-1.c is is free software; you can redistribute it and/or modify
+it under the terms of the GNU Library General Public License as published by
+the Free Software Foundation; either version 2 of the License, or (at your
+option) any later version. It is copyright 1997, 1999 Makoto Matsumoto and
+Takuji Nishimura.
+
+On Debian systems, the complete text of the GNU Library General
+Public License can be found in `/usr/share/common-licenses/LGPL'.
+
+
The Debian packaging is © 2007, Charles Plessy
<charles-debian-nospam at plessy.org> and is licensed under the same terms as
RNAhybrid itself, see above.
Deleted: trunk/packages/rnahybrid/trunk/depcomp
===================================================================
--- trunk/packages/rnahybrid/trunk/depcomp 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/depcomp 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,464 +0,0 @@
-#! /bin/sh
-
-# depcomp - compile a program generating dependencies as side-effects
-# Copyright 1999, 2000 Free Software Foundation, Inc.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# As a special exception to the GNU General Public License, if you
-# distribute this file as part of a program that contains a
-# configuration script generated by Autoconf, you may include it under
-# the same distribution terms that you use for the rest of that program.
-
-# Originally written by Alexandre Oliva <oliva at dcc.unicamp.br>.
-
-if test -z "$depmode" || test -z "$source" || test -z "$object"; then
- echo "depcomp: Variables source, object and depmode must be set" 1>&2
- exit 1
-fi
-# `libtool' can also be set to `yes' or `no'.
-
-if test -z "$depfile"; then
- base=`echo "$object" | sed -e 's,^.*/,,' -e 's,\.\([^.]*\)$,.P\1,'`
- dir=`echo "$object" | sed 's,/.*$,/,'`
- if test "$dir" = "$object"; then
- dir=
- fi
- # FIXME: should be _deps on DOS.
- depfile="$dir.deps/$base"
-fi
-
-tmpdepfile=${tmpdepfile-`echo "$depfile" | sed 's/\.\([^.]*\)$/.T\1/'`}
-
-rm -f "$tmpdepfile"
-
-# Some modes work just like other modes, but use different flags. We
-# parameterize here, but still list the modes in the big case below,
-# to make depend.m4 easier to write. Note that we *cannot* use a case
-# here, because this file can only contain one case statement.
-if test "$depmode" = hp; then
- # HP compiler uses -M and no extra arg.
- gccflag=-M
- depmode=gcc
-fi
-
-if test "$depmode" = dashXmstdout; then
- # This is just like dashmstdout with a different argument.
- dashmflag=-xM
- depmode=dashmstdout
-fi
-
-case "$depmode" in
-gcc3)
-## gcc 3 implements dependency tracking that does exactly what
-## we want. Yay! Note: for some reason libtool 1.4 doesn't like
-## it if -MD -MP comes after the -MF stuff. Hmm.
- "$@" -MT "$object" -MD -MP -MF "$tmpdepfile"
- stat=$?
- if test $stat -eq 0; then :
- else
- rm -f "$tmpdepfile"
- exit $stat
- fi
- mv "$tmpdepfile" "$depfile"
- ;;
-
-gcc)
-## There are various ways to get dependency output from gcc. Here's
-## why we pick this rather obscure method:
-## - Don't want to use -MD because we'd like the dependencies to end
-## up in a subdir. Having to rename by hand is ugly.
-## (We might end up doing this anyway to support other compilers.)
-## - The DEPENDENCIES_OUTPUT environment variable makes gcc act like
-## -MM, not -M (despite what the docs say).
-## - Using -M directly means running the compiler twice (even worse
-## than renaming).
- if test -z "$gccflag"; then
- gccflag=-MD,
- fi
- "$@" -Wp,"$gccflag$tmpdepfile"
- stat=$?
- if test $stat -eq 0; then :
- else
- rm -f "$tmpdepfile"
- exit $stat
- fi
- rm -f "$depfile"
- echo "$object : \\" > "$depfile"
- alpha=ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz
-## The second -e expression handles DOS-style file names with drive letters.
- sed -e 's/^[^:]*: / /' \
- -e 's/^['$alpha']:\/[^:]*: / /' < "$tmpdepfile" >> "$depfile"
-## This next piece of magic avoids the `deleted header file' problem.
-## The problem is that when a header file which appears in a .P file
-## is deleted, the dependency causes make to die (because there is
-## typically no way to rebuild the header). We avoid this by adding
-## dummy dependencies for each header file. Too bad gcc doesn't do
-## this for us directly.
- tr ' ' '
-' < "$tmpdepfile" |
-## Some versions of gcc put a space before the `:'. On the theory
-## that the space means something, we add a space to the output as
-## well.
-## Some versions of the HPUX 10.20 sed can't process this invocation
-## correctly. Breaking it into two sed invocations is a workaround.
- sed -e 's/^\\$//' -e '/^$/d' -e '/:$/d' | sed -e 's/$/ :/' >> "$depfile"
- rm -f "$tmpdepfile"
- ;;
-
-hp)
- # This case exists only to let depend.m4 do its work. It works by
- # looking at the text of this script. This case will never be run,
- # since it is checked for above.
- exit 1
- ;;
-
-sgi)
- if test "$libtool" = yes; then
- "$@" "-Wp,-MDupdate,$tmpdepfile"
- else
- "$@" -MDupdate "$tmpdepfile"
- fi
- stat=$?
- if test $stat -eq 0; then :
- else
- rm -f "$tmpdepfile"
- exit $stat
- fi
- rm -f "$depfile"
-
- if test -f "$tmpdepfile"; then # yes, the sourcefile depend on other files
- echo "$object : \\" > "$depfile"
-
- # Clip off the initial element (the dependent). Don't try to be
- # clever and replace this with sed code, as IRIX sed won't handle
- # lines with more than a fixed number of characters (4096 in
- # IRIX 6.2 sed, 8192 in IRIX 6.5). We also remove comment lines;
- # the IRIX cc adds comments like `#:fec' to the end of the
- # dependency line.
- tr ' ' '
-' < "$tmpdepfile" \
- | sed -e 's/^.*\.o://' -e 's/#.*$//' -e '/^$/ d' | \
- tr '
-' ' ' >> $depfile
- echo >> $depfile
-
- # The second pass generates a dummy entry for each header file.
- tr ' ' '
-' < "$tmpdepfile" \
- | sed -e 's/^.*\.o://' -e 's/#.*$//' -e '/^$/ d' -e 's/$/:/' \
- >> $depfile
- else
- # The sourcefile does not contain any dependencies, so just
- # store a dummy comment line, to avoid errors with the Makefile
- # "include basename.Plo" scheme.
- echo "#dummy" > "$depfile"
- fi
- rm -f "$tmpdepfile"
- ;;
-
-aix)
- # The C for AIX Compiler uses -M and outputs the dependencies
- # in a .u file. This file always lives in the current directory.
- # Also, the AIX compiler puts `$object:' at the start of each line;
- # $object doesn't have directory information.
- stripped=`echo "$object" | sed -e 's,^.*/,,' -e 's/\(.*\)\..*$/\1/'`
- tmpdepfile="$stripped.u"
- outname="$stripped.o"
- if test "$libtool" = yes; then
- "$@" -Wc,-M
- else
- "$@" -M
- fi
-
- stat=$?
- if test $stat -eq 0; then :
- else
- rm -f "$tmpdepfile"
- exit $stat
- fi
-
- if test -f "$tmpdepfile"; then
- # Each line is of the form `foo.o: dependent.h'.
- # Do two passes, one to just change these to
- # `$object: dependent.h' and one to simply `dependent.h:'.
- sed -e "s,^$outname:,$object :," < "$tmpdepfile" > "$depfile"
- sed -e "s,^$outname: \(.*\)$,\1:," < "$tmpdepfile" >> "$depfile"
- else
- # The sourcefile does not contain any dependencies, so just
- # store a dummy comment line, to avoid errors with the Makefile
- # "include basename.Plo" scheme.
- echo "#dummy" > "$depfile"
- fi
- rm -f "$tmpdepfile"
- ;;
-
-icc)
- # Must come before tru64.
-
- # Intel's C compiler understands `-MD -MF file'. However
- # icc -MD -MF foo.d -c -o sub/foo.o sub/foo.c
- # will fill foo.d with something like
- # foo.o: sub/foo.c
- # foo.o: sub/foo.h
- # which is wrong. We want:
- # sub/foo.o: sub/foo.c
- # sub/foo.o: sub/foo.h
- # sub/foo.c:
- # sub/foo.h:
-
- "$@" -MD -MF "$tmpdepfile"
- stat=$?
- if test $stat -eq 0; then :
- else
- rm -f "$tmpdepfile"
- exit $stat
- fi
- rm -f "$depfile"
- # Each line is of the form `foo.o: dependent.h'.
- # Do two passes, one to just change these to
- # `$object: dependent.h' and one to simply `dependent.h:'.
- sed -e "s,^[^:]*:,$object :," < "$tmpdepfile" > "$depfile"
- sed -e "s,^[^:]*: \(.*\)$,\1:," < "$tmpdepfile" >> "$depfile"
- rm -f "$tmpdepfile"
- ;;
-
-tru64)
- # The Tru64 compiler uses -MD to generate dependencies as a side
- # effect. `cc -MD -o foo.o ...' puts the dependencies into `foo.o.d'.
- # At least on Alpha/Redhat 6.1, Compaq CCC V6.2-504 seems to put
- # dependencies in `foo.d' instead, so we check for that too.
- # Subdirectories are respected.
- dir=`echo "$object" | sed -e 's|/[^/]*$|/|'`
- test "x$dir" = "x$object" && dir=
- base=`echo "$object" | sed -e 's|^.*/||' -e 's/\.o$//' -e 's/\.lo$//'`
-
- if test "$libtool" = yes; then
- tmpdepfile1="$dir.libs/$base.lo.d"
- tmpdepfile2="$dir.libs/$base.d"
- "$@" -Wc,-MD
- else
- tmpdepfile1="$dir$base.o.d"
- tmpdepfile2="$dir$base.d"
- "$@" -MD
- fi
-
- stat=$?
- if test $stat -eq 0; then :
- else
- rm -f "$tmpdepfile1" "$tmpdepfile2"
- exit $stat
- fi
-
- if test -f "$tmpdepfile1"; then
- tmpdepfile="$tmpdepfile1"
- else
- tmpdepfile="$tmpdepfile2"
- fi
- if test -f "$tmpdepfile"; then
- sed -e "s,^.*\.[a-z]*:,$object:," < "$tmpdepfile" > "$depfile"
- # That's a space and a tab in the [].
- sed -e 's,^.*\.[a-z]*:[ ]*,,' -e 's,$,:,' < "$tmpdepfile" >> "$depfile"
- else
- echo "#dummy" > "$depfile"
- fi
- rm -f "$tmpdepfile"
- ;;
-
-#nosideeffect)
- # This comment above is used by automake to tell side-effect
- # dependency tracking mechanisms from slower ones.
-
-dashmstdout)
- # Important note: in order to support this mode, a compiler *must*
- # always write the proprocessed file to stdout, regardless of -o.
- "$@" || exit $?
-
- # Remove the call to Libtool.
- if test "$libtool" = yes; then
- while test $1 != '--mode=compile'; do
- shift
- done
- shift
- fi
-
- # Remove `-o $object'.
- IFS=" "
- for arg
- do
- case $arg in
- -o)
- shift
- ;;
- $object)
- shift
- ;;
- *)
- set fnord "$@" "$arg"
- shift # fnord
- shift # $arg
- ;;
- esac
- done
-
- test -z "$dashmflag" && dashmflag=-M
- # Require at least two characters before searching for `:'
- # in the target name. This is to cope with DOS-style filenames:
- # a dependency such as `c:/foo/bar' could be seen as target `c' otherwise.
- "$@" $dashmflag |
- sed 's:^[ ]*[^: ][^:][^:]*\:[ ]*:'"$object"'\: :' > "$tmpdepfile"
- rm -f "$depfile"
- cat < "$tmpdepfile" > "$depfile"
- tr ' ' '
-' < "$tmpdepfile" | \
-## Some versions of the HPUX 10.20 sed can't process this invocation
-## correctly. Breaking it into two sed invocations is a workaround.
- sed -e 's/^\\$//' -e '/^$/d' -e '/:$/d' | sed -e 's/$/ :/' >> "$depfile"
- rm -f "$tmpdepfile"
- ;;
-
-dashXmstdout)
- # This case only exists to satisfy depend.m4. It is never actually
- # run, as this mode is specially recognized in the preamble.
- exit 1
- ;;
-
-makedepend)
- "$@" || exit $?
- # Remove any Libtool call
- if test "$libtool" = yes; then
- while test $1 != '--mode=compile'; do
- shift
- done
- shift
- fi
- # X makedepend
- shift
- cleared=no
- for arg in "$@"; do
- case $cleared in
- no)
- set ""; shift
- cleared=yes ;;
- esac
- case "$arg" in
- -D*|-I*)
- set fnord "$@" "$arg"; shift ;;
- # Strip any option that makedepend may not understand. Remove
- # the object too, otherwise makedepend will parse it as a source file.
- -*|$object)
- ;;
- *)
- set fnord "$@" "$arg"; shift ;;
- esac
- done
- obj_suffix="`echo $object | sed 's/^.*\././'`"
- touch "$tmpdepfile"
- ${MAKEDEPEND-makedepend} -o"$obj_suffix" -f"$tmpdepfile" "$@"
- rm -f "$depfile"
- cat < "$tmpdepfile" > "$depfile"
- sed '1,2d' "$tmpdepfile" | tr ' ' '
-' | \
-## Some versions of the HPUX 10.20 sed can't process this invocation
-## correctly. Breaking it into two sed invocations is a workaround.
- sed -e 's/^\\$//' -e '/^$/d' -e '/:$/d' | sed -e 's/$/ :/' >> "$depfile"
- rm -f "$tmpdepfile" "$tmpdepfile".bak
- ;;
-
-cpp)
- # Important note: in order to support this mode, a compiler *must*
- # always write the proprocessed file to stdout.
- "$@" || exit $?
-
- # Remove the call to Libtool.
- if test "$libtool" = yes; then
- while test $1 != '--mode=compile'; do
- shift
- done
- shift
- fi
-
- # Remove `-o $object'.
- IFS=" "
- for arg
- do
- case $arg in
- -o)
- shift
- ;;
- $object)
- shift
- ;;
- *)
- set fnord "$@" "$arg"
- shift # fnord
- shift # $arg
- ;;
- esac
- done
-
- "$@" -E |
- sed -n '/^# [0-9][0-9]* "\([^"]*\)".*/ s:: \1 \\:p' |
- sed '$ s: \\$::' > "$tmpdepfile"
- rm -f "$depfile"
- echo "$object : \\" > "$depfile"
- cat < "$tmpdepfile" >> "$depfile"
- sed < "$tmpdepfile" '/^$/d;s/^ //;s/ \\$//;s/$/ :/' >> "$depfile"
- rm -f "$tmpdepfile"
- ;;
-
-msvisualcpp)
- # Important note: in order to support this mode, a compiler *must*
- # always write the proprocessed file to stdout, regardless of -o,
- # because we must use -o when running libtool.
- "$@" || exit $?
- IFS=" "
- for arg
- do
- case "$arg" in
- "-Gm"|"/Gm"|"-Gi"|"/Gi"|"-ZI"|"/ZI")
- set fnord "$@"
- shift
- shift
- ;;
- *)
- set fnord "$@" "$arg"
- shift
- shift
- ;;
- esac
- done
- "$@" -E |
- sed -n '/^#line [0-9][0-9]* "\([^"]*\)"/ s::echo "`cygpath -u \\"\1\\"`":p' | sort | uniq > "$tmpdepfile"
- rm -f "$depfile"
- echo "$object : \\" > "$depfile"
- . "$tmpdepfile" | sed 's% %\\ %g' | sed -n '/^\(.*\)$/ s:: \1 \\:p' >> "$depfile"
- echo " " >> "$depfile"
- . "$tmpdepfile" | sed 's% %\\ %g' | sed -n '/^\(.*\)$/ s::\1\::p' >> "$depfile"
- rm -f "$tmpdepfile"
- ;;
-
-none)
- exec "$@"
- ;;
-
-*)
- echo "Unknown depmode $depmode" 1>&2
- exit 1
- ;;
-esac
-
-exit 0
Deleted: trunk/packages/rnahybrid/trunk/install-sh
===================================================================
--- trunk/packages/rnahybrid/trunk/install-sh 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/install-sh 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,276 +0,0 @@
-#!/bin/sh
-#
-# install - install a program, script, or datafile
-# This comes from X11R5 (mit/util/scripts/install.sh).
-#
-# Copyright 1991 by the Massachusetts Institute of Technology
-#
-# Permission to use, copy, modify, distribute, and sell this software and its
-# documentation for any purpose is hereby granted without fee, provided that
-# the above copyright notice appear in all copies and that both that
-# copyright notice and this permission notice appear in supporting
-# documentation, and that the name of M.I.T. not be used in advertising or
-# publicity pertaining to distribution of the software without specific,
-# written prior permission. M.I.T. makes no representations about the
-# suitability of this software for any purpose. It is provided "as is"
-# without express or implied warranty.
-#
-# Calling this script install-sh is preferred over install.sh, to prevent
-# `make' implicit rules from creating a file called install from it
-# when there is no Makefile.
-#
-# This script is compatible with the BSD install script, but was written
-# from scratch. It can only install one file at a time, a restriction
-# shared with many OS's install programs.
-
-
-# set DOITPROG to echo to test this script
-
-# Don't use :- since 4.3BSD and earlier shells don't like it.
-doit="${DOITPROG-}"
-
-
-# put in absolute paths if you don't have them in your path; or use env. vars.
-
-mvprog="${MVPROG-mv}"
-cpprog="${CPPROG-cp}"
-chmodprog="${CHMODPROG-chmod}"
-chownprog="${CHOWNPROG-chown}"
-chgrpprog="${CHGRPPROG-chgrp}"
-stripprog="${STRIPPROG-strip}"
-rmprog="${RMPROG-rm}"
-mkdirprog="${MKDIRPROG-mkdir}"
-
-transformbasename=""
-transform_arg=""
-instcmd="$mvprog"
-chmodcmd="$chmodprog 0755"
-chowncmd=""
-chgrpcmd=""
-stripcmd=""
-rmcmd="$rmprog -f"
-mvcmd="$mvprog"
-src=""
-dst=""
-dir_arg=""
-
-while [ x"$1" != x ]; do
- case $1 in
- -c) instcmd=$cpprog
- shift
- continue;;
-
- -d) dir_arg=true
- shift
- continue;;
-
- -m) chmodcmd="$chmodprog $2"
- shift
- shift
- continue;;
-
- -o) chowncmd="$chownprog $2"
- shift
- shift
- continue;;
-
- -g) chgrpcmd="$chgrpprog $2"
- shift
- shift
- continue;;
-
- -s) stripcmd=$stripprog
- shift
- continue;;
-
- -t=*) transformarg=`echo $1 | sed 's/-t=//'`
- shift
- continue;;
-
- -b=*) transformbasename=`echo $1 | sed 's/-b=//'`
- shift
- continue;;
-
- *) if [ x"$src" = x ]
- then
- src=$1
- else
- # this colon is to work around a 386BSD /bin/sh bug
- :
- dst=$1
- fi
- shift
- continue;;
- esac
-done
-
-if [ x"$src" = x ]
-then
- echo "$0: no input file specified" >&2
- exit 1
-else
- :
-fi
-
-if [ x"$dir_arg" != x ]; then
- dst=$src
- src=""
-
- if [ -d "$dst" ]; then
- instcmd=:
- chmodcmd=""
- else
- instcmd=$mkdirprog
- fi
-else
-
-# Waiting for this to be detected by the "$instcmd $src $dsttmp" command
-# might cause directories to be created, which would be especially bad
-# if $src (and thus $dsttmp) contains '*'.
-
- if [ -f "$src" ] || [ -d "$src" ]
- then
- :
- else
- echo "$0: $src does not exist" >&2
- exit 1
- fi
-
- if [ x"$dst" = x ]
- then
- echo "$0: no destination specified" >&2
- exit 1
- else
- :
- fi
-
-# If destination is a directory, append the input filename; if your system
-# does not like double slashes in filenames, you may need to add some logic
-
- if [ -d "$dst" ]
- then
- dst=$dst/`basename "$src"`
- else
- :
- fi
-fi
-
-## this sed command emulates the dirname command
-dstdir=`echo "$dst" | sed -e 's,[^/]*$,,;s,/$,,;s,^$,.,'`
-
-# Make sure that the destination directory exists.
-# this part is taken from Noah Friedman's mkinstalldirs script
-
-# Skip lots of stat calls in the usual case.
-if [ ! -d "$dstdir" ]; then
-defaultIFS='
- '
-IFS="${IFS-$defaultIFS}"
-
-oIFS=$IFS
-# Some sh's can't handle IFS=/ for some reason.
-IFS='%'
-set - `echo "$dstdir" | sed -e 's@/@%@g' -e 's@^%@/@'`
-IFS=$oIFS
-
-pathcomp=''
-
-while [ $# -ne 0 ] ; do
- pathcomp=$pathcomp$1
- shift
-
- if [ ! -d "$pathcomp" ] ;
- then
- $mkdirprog "$pathcomp"
- else
- :
- fi
-
- pathcomp=$pathcomp/
-done
-fi
-
-if [ x"$dir_arg" != x ]
-then
- $doit $instcmd "$dst" &&
-
- if [ x"$chowncmd" != x ]; then $doit $chowncmd "$dst"; else : ; fi &&
- if [ x"$chgrpcmd" != x ]; then $doit $chgrpcmd "$dst"; else : ; fi &&
- if [ x"$stripcmd" != x ]; then $doit $stripcmd "$dst"; else : ; fi &&
- if [ x"$chmodcmd" != x ]; then $doit $chmodcmd "$dst"; else : ; fi
-else
-
-# If we're going to rename the final executable, determine the name now.
-
- if [ x"$transformarg" = x ]
- then
- dstfile=`basename "$dst"`
- else
- dstfile=`basename "$dst" $transformbasename |
- sed $transformarg`$transformbasename
- fi
-
-# don't allow the sed command to completely eliminate the filename
-
- if [ x"$dstfile" = x ]
- then
- dstfile=`basename "$dst"`
- else
- :
- fi
-
-# Make a couple of temp file names in the proper directory.
-
- dsttmp=$dstdir/#inst.$$#
- rmtmp=$dstdir/#rm.$$#
-
-# Trap to clean up temp files at exit.
-
- trap 'status=$?; rm -f "$dsttmp" "$rmtmp" && exit $status' 0
- trap '(exit $?); exit' 1 2 13 15
-
-# Move or copy the file name to the temp name
-
- $doit $instcmd "$src" "$dsttmp" &&
-
-# and set any options; do chmod last to preserve setuid bits
-
-# If any of these fail, we abort the whole thing. If we want to
-# ignore errors from any of these, just make sure not to ignore
-# errors from the above "$doit $instcmd $src $dsttmp" command.
-
- if [ x"$chowncmd" != x ]; then $doit $chowncmd "$dsttmp"; else :;fi &&
- if [ x"$chgrpcmd" != x ]; then $doit $chgrpcmd "$dsttmp"; else :;fi &&
- if [ x"$stripcmd" != x ]; then $doit $stripcmd "$dsttmp"; else :;fi &&
- if [ x"$chmodcmd" != x ]; then $doit $chmodcmd "$dsttmp"; else :;fi &&
-
-# Now remove or move aside any old file at destination location. We try this
-# two ways since rm can't unlink itself on some systems and the destination
-# file might be busy for other reasons. In this case, the final cleanup
-# might fail but the new file should still install successfully.
-
-{
- if [ -f "$dstdir/$dstfile" ]
- then
- $doit $rmcmd -f "$dstdir/$dstfile" 2>/dev/null ||
- $doit $mvcmd -f "$dstdir/$dstfile" "$rmtmp" 2>/dev/null ||
- {
- echo "$0: cannot unlink or rename $dstdir/$dstfile" >&2
- (exit 1); exit
- }
- else
- :
- fi
-} &&
-
-# Now rename the file to the real destination.
-
- $doit $mvcmd "$dsttmp" "$dstdir/$dstfile"
-
-fi &&
-
-# The final little trick to "correctly" pass the exit status to the exit trap.
-
-{
- (exit 0); exit
-}
Deleted: trunk/packages/rnahybrid/trunk/missing
===================================================================
--- trunk/packages/rnahybrid/trunk/missing 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/missing 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,336 +0,0 @@
-#! /bin/sh
-# Common stub for a few missing GNU programs while installing.
-# Copyright (C) 1996, 1997, 1999, 2000, 2002 Free Software Foundation, Inc.
-# Originally by Fran,cois Pinard <pinard at iro.umontreal.ca>, 1996.
-
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 2, or (at your option)
-# any later version.
-
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-# GNU General Public License for more details.
-
-# You should have received a copy of the GNU General Public License
-# along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA
-# 02111-1307, USA.
-
-# As a special exception to the GNU General Public License, if you
-# distribute this file as part of a program that contains a
-# configuration script generated by Autoconf, you may include it under
-# the same distribution terms that you use for the rest of that program.
-
-if test $# -eq 0; then
- echo 1>&2 "Try \`$0 --help' for more information"
- exit 1
-fi
-
-run=:
-
-# In the cases where this matters, `missing' is being run in the
-# srcdir already.
-if test -f configure.ac; then
- configure_ac=configure.ac
-else
- configure_ac=configure.in
-fi
-
-case "$1" in
---run)
- # Try to run requested program, and just exit if it succeeds.
- run=
- shift
- "$@" && exit 0
- ;;
-esac
-
-# If it does not exist, or fails to run (possibly an outdated version),
-# try to emulate it.
-case "$1" in
-
- -h|--h|--he|--hel|--help)
- echo "\
-$0 [OPTION]... PROGRAM [ARGUMENT]...
-
-Handle \`PROGRAM [ARGUMENT]...' for when PROGRAM is missing, or return an
-error status if there is no known handling for PROGRAM.
-
-Options:
- -h, --help display this help and exit
- -v, --version output version information and exit
- --run try to run the given command, and emulate it if it fails
-
-Supported PROGRAM values:
- aclocal touch file \`aclocal.m4'
- autoconf touch file \`configure'
- autoheader touch file \`config.h.in'
- automake touch all \`Makefile.in' files
- bison create \`y.tab.[ch]', if possible, from existing .[ch]
- flex create \`lex.yy.c', if possible, from existing .c
- help2man touch the output file
- lex create \`lex.yy.c', if possible, from existing .c
- makeinfo touch the output file
- tar try tar, gnutar, gtar, then tar without non-portable flags
- yacc create \`y.tab.[ch]', if possible, from existing .[ch]"
- ;;
-
- -v|--v|--ve|--ver|--vers|--versi|--versio|--version)
- echo "missing 0.4 - GNU automake"
- ;;
-
- -*)
- echo 1>&2 "$0: Unknown \`$1' option"
- echo 1>&2 "Try \`$0 --help' for more information"
- exit 1
- ;;
-
- aclocal*)
- if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
- # We have it, but it failed.
- exit 1
- fi
-
- echo 1>&2 "\
-WARNING: \`$1' is missing on your system. You should only need it if
- you modified \`acinclude.m4' or \`${configure_ac}'. You might want
- to install the \`Automake' and \`Perl' packages. Grab them from
- any GNU archive site."
- touch aclocal.m4
- ;;
-
- autoconf)
- if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
- # We have it, but it failed.
- exit 1
- fi
-
- echo 1>&2 "\
-WARNING: \`$1' is missing on your system. You should only need it if
- you modified \`${configure_ac}'. You might want to install the
- \`Autoconf' and \`GNU m4' packages. Grab them from any GNU
- archive site."
- touch configure
- ;;
-
- autoheader)
- if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
- # We have it, but it failed.
- exit 1
- fi
-
- echo 1>&2 "\
-WARNING: \`$1' is missing on your system. You should only need it if
- you modified \`acconfig.h' or \`${configure_ac}'. You might want
- to install the \`Autoconf' and \`GNU m4' packages. Grab them
- from any GNU archive site."
- files=`sed -n 's/^[ ]*A[CM]_CONFIG_HEADER(\([^)]*\)).*/\1/p' ${configure_ac}`
- test -z "$files" && files="config.h"
- touch_files=
- for f in $files; do
- case "$f" in
- *:*) touch_files="$touch_files "`echo "$f" |
- sed -e 's/^[^:]*://' -e 's/:.*//'`;;
- *) touch_files="$touch_files $f.in";;
- esac
- done
- touch $touch_files
- ;;
-
- automake*)
- if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
- # We have it, but it failed.
- exit 1
- fi
-
- echo 1>&2 "\
-WARNING: \`$1' is missing on your system. You should only need it if
- you modified \`Makefile.am', \`acinclude.m4' or \`${configure_ac}'.
- You might want to install the \`Automake' and \`Perl' packages.
- Grab them from any GNU archive site."
- find . -type f -name Makefile.am -print |
- sed 's/\.am$/.in/' |
- while read f; do touch "$f"; done
- ;;
-
- autom4te)
- if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
- # We have it, but it failed.
- exit 1
- fi
-
- echo 1>&2 "\
-WARNING: \`$1' is needed, and you do not seem to have it handy on your
- system. You might have modified some files without having the
- proper tools for further handling them.
- You can get \`$1Help2man' as part of \`Autoconf' from any GNU
- archive site."
-
- file=`echo "$*" | sed -n 's/.*--output[ =]*\([^ ]*\).*/\1/p'`
- test -z "$file" && file=`echo "$*" | sed -n 's/.*-o[ ]*\([^ ]*\).*/\1/p'`
- if test -f "$file"; then
- touch $file
- else
- test -z "$file" || exec >$file
- echo "#! /bin/sh"
- echo "# Created by GNU Automake missing as a replacement of"
- echo "# $ $@"
- echo "exit 0"
- chmod +x $file
- exit 1
- fi
- ;;
-
- bison|yacc)
- echo 1>&2 "\
-WARNING: \`$1' is missing on your system. You should only need it if
- you modified a \`.y' file. You may need the \`Bison' package
- in order for those modifications to take effect. You can get
- \`Bison' from any GNU archive site."
- rm -f y.tab.c y.tab.h
- if [ $# -ne 1 ]; then
- eval LASTARG="\${$#}"
- case "$LASTARG" in
- *.y)
- SRCFILE=`echo "$LASTARG" | sed 's/y$/c/'`
- if [ -f "$SRCFILE" ]; then
- cp "$SRCFILE" y.tab.c
- fi
- SRCFILE=`echo "$LASTARG" | sed 's/y$/h/'`
- if [ -f "$SRCFILE" ]; then
- cp "$SRCFILE" y.tab.h
- fi
- ;;
- esac
- fi
- if [ ! -f y.tab.h ]; then
- echo >y.tab.h
- fi
- if [ ! -f y.tab.c ]; then
- echo 'main() { return 0; }' >y.tab.c
- fi
- ;;
-
- lex|flex)
- echo 1>&2 "\
-WARNING: \`$1' is missing on your system. You should only need it if
- you modified a \`.l' file. You may need the \`Flex' package
- in order for those modifications to take effect. You can get
- \`Flex' from any GNU archive site."
- rm -f lex.yy.c
- if [ $# -ne 1 ]; then
- eval LASTARG="\${$#}"
- case "$LASTARG" in
- *.l)
- SRCFILE=`echo "$LASTARG" | sed 's/l$/c/'`
- if [ -f "$SRCFILE" ]; then
- cp "$SRCFILE" lex.yy.c
- fi
- ;;
- esac
- fi
- if [ ! -f lex.yy.c ]; then
- echo 'main() { return 0; }' >lex.yy.c
- fi
- ;;
-
- help2man)
- if test -z "$run" && ($1 --version) > /dev/null 2>&1; then
- # We have it, but it failed.
- exit 1
- fi
-
- echo 1>&2 "\
-WARNING: \`$1' is missing on your system. You should only need it if
- you modified a dependency of a manual page. You may need the
- \`Help2man' package in order for those modifications to take
- effect. You can get \`Help2man' from any GNU archive site."
-
- file=`echo "$*" | sed -n 's/.*-o \([^ ]*\).*/\1/p'`
- if test -z "$file"; then
- file=`echo "$*" | sed -n 's/.*--output=\([^ ]*\).*/\1/p'`
- fi
- if [ -f "$file" ]; then
- touch $file
- else
- test -z "$file" || exec >$file
- echo ".ab help2man is required to generate this page"
- exit 1
- fi
- ;;
-
- makeinfo)
- if test -z "$run" && (makeinfo --version) > /dev/null 2>&1; then
- # We have makeinfo, but it failed.
- exit 1
- fi
-
- echo 1>&2 "\
-WARNING: \`$1' is missing on your system. You should only need it if
- you modified a \`.texi' or \`.texinfo' file, or any other file
- indirectly affecting the aspect of the manual. The spurious
- call might also be the consequence of using a buggy \`make' (AIX,
- DU, IRIX). You might want to install the \`Texinfo' package or
- the \`GNU make' package. Grab either from any GNU archive site."
- file=`echo "$*" | sed -n 's/.*-o \([^ ]*\).*/\1/p'`
- if test -z "$file"; then
- file=`echo "$*" | sed 's/.* \([^ ]*\) *$/\1/'`
- file=`sed -n '/^@setfilename/ { s/.* \([^ ]*\) *$/\1/; p; q; }' $file`
- fi
- touch $file
- ;;
-
- tar)
- shift
- if test -n "$run"; then
- echo 1>&2 "ERROR: \`tar' requires --run"
- exit 1
- fi
-
- # We have already tried tar in the generic part.
- # Look for gnutar/gtar before invocation to avoid ugly error
- # messages.
- if (gnutar --version > /dev/null 2>&1); then
- gnutar "$@" && exit 0
- fi
- if (gtar --version > /dev/null 2>&1); then
- gtar "$@" && exit 0
- fi
- firstarg="$1"
- if shift; then
- case "$firstarg" in
- *o*)
- firstarg=`echo "$firstarg" | sed s/o//`
- tar "$firstarg" "$@" && exit 0
- ;;
- esac
- case "$firstarg" in
- *h*)
- firstarg=`echo "$firstarg" | sed s/h//`
- tar "$firstarg" "$@" && exit 0
- ;;
- esac
- fi
-
- echo 1>&2 "\
-WARNING: I can't seem to be able to run \`tar' with the given arguments.
- You may want to install GNU tar or Free paxutils, or check the
- command line arguments."
- exit 1
- ;;
-
- *)
- echo 1>&2 "\
-WARNING: \`$1' is needed, and you do not seem to have it handy on your
- system. You might have modified some files without having the
- proper tools for further handling them. Check the \`README' file,
- it often tells you about the needed prerequirements for installing
- this package. You may also peek at any GNU archive site, in case
- some other package would contain this missing \`$1' program."
- exit 1
- ;;
-esac
-
-exit 0
Deleted: trunk/packages/rnahybrid/trunk/mkinstalldirs
===================================================================
--- trunk/packages/rnahybrid/trunk/mkinstalldirs 2007-08-23 19:10:22 UTC (rev 414)
+++ trunk/packages/rnahybrid/trunk/mkinstalldirs 2007-09-02 01:59:54 UTC (rev 415)
@@ -1,111 +0,0 @@
-#! /bin/sh
-# mkinstalldirs --- make directory hierarchy
-# Author: Noah Friedman <friedman at prep.ai.mit.edu>
-# Created: 1993-05-16
-# Public domain
-
-errstatus=0
-dirmode=""
-
-usage="\
-Usage: mkinstalldirs [-h] [--help] [-m mode] dir ..."
-
-# process command line arguments
-while test $# -gt 0 ; do
- case $1 in
- -h | --help | --h*) # -h for help
- echo "$usage" 1>&2
- exit 0
- ;;
- -m) # -m PERM arg
- shift
- test $# -eq 0 && { echo "$usage" 1>&2; exit 1; }
- dirmode=$1
- shift
- ;;
- --) # stop option processing
- shift
- break
- ;;
- -*) # unknown option
- echo "$usage" 1>&2
- exit 1
- ;;
- *) # first non-opt arg
- break
- ;;
- esac
-done
-
-for file
-do
- if test -d "$file"; then
- shift
- else
- break
- fi
-done
-
-case $# in
- 0) exit 0 ;;
-esac
-
-case $dirmode in
- '')
- if mkdir -p -- . 2>/dev/null; then
- echo "mkdir -p -- $*"
- exec mkdir -p -- "$@"
- fi
- ;;
- *)
- if mkdir -m "$dirmode" -p -- . 2>/dev/null; then
- echo "mkdir -m $dirmode -p -- $*"
- exec mkdir -m "$dirmode" -p -- "$@"
- fi
- ;;
-esac
-
-for file
-do
- set fnord `echo ":$file" | sed -ne 's/^:\//#/;s/^://;s/\// /g;s/^#/\//;p'`
- shift
-
- pathcomp=
- for d
- do
- pathcomp="$pathcomp$d"
- case $pathcomp in
- -*) pathcomp=./$pathcomp ;;
- esac
-
- if test ! -d "$pathcomp"; then
- echo "mkdir $pathcomp"
-
- mkdir "$pathcomp" || lasterr=$?
-
- if test ! -d "$pathcomp"; then
- errstatus=$lasterr
- else
- if test ! -z "$dirmode"; then
- echo "chmod $dirmode $pathcomp"
- lasterr=""
- chmod "$dirmode" "$pathcomp" || lasterr=$?
-
- if test ! -z "$lasterr"; then
- errstatus=$lasterr
- fi
- fi
- fi
- fi
-
- pathcomp="$pathcomp/"
- done
-done
-
-exit $errstatus
-
-# Local Variables:
-# mode: shell-script
-# sh-indentation: 2
-# End:
-# mkinstalldirs ends here
More information about the debian-med-commit
mailing list