[med-svn] r1084 - in trunk/packages: . emboss emboss/branches emboss/branches/upstream emboss/branches/upstream/current emboss/branches/upstream/current/test emboss/branches/upstream/current/test/gb emboss/branches/upstream/current/test/wormpep
charles-guest at alioth.debian.org
charles-guest at alioth.debian.org
Thu Jan 10 05:25:30 UTC 2008
Author: charles-guest
Date: 2008-01-10 05:25:29 +0000 (Thu, 10 Jan 2008)
New Revision: 1084
Added:
trunk/packages/emboss/
trunk/packages/emboss/branches/
trunk/packages/emboss/branches/upstream/
trunk/packages/emboss/branches/upstream/current/
trunk/packages/emboss/branches/upstream/current/test/
trunk/packages/emboss/branches/upstream/current/test/gb/
trunk/packages/emboss/branches/upstream/current/test/gb/Makefile
trunk/packages/emboss/branches/upstream/current/test/wormpep/
trunk/packages/emboss/branches/upstream/current/test/wormpep/Makefile
Log:
[svn-inject] Installing original source of emboss
Added: trunk/packages/emboss/branches/upstream/current/test/gb/Makefile
===================================================================
--- trunk/packages/emboss/branches/upstream/current/test/gb/Makefile (rev 0)
+++ trunk/packages/emboss/branches/upstream/current/test/gb/Makefile 2008-01-10 05:25:29 UTC (rev 1084)
@@ -0,0 +1,381 @@
+# Makefile.in generated by automake 1.10 from Makefile.am.
+# test/gb/Makefile. Generated from Makefile.in by configure.
+
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005, 2006 Free Software Foundation, Inc.
+# This Makefile.in is free software; the Free Software Foundation
+# gives unlimited permission to copy and/or distribute it,
+# with or without modifications, as long as this notice is preserved.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
+# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
+# PARTICULAR PURPOSE.
+
+
+
+
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+PRE_UNINSTALL = :
+POST_UNINSTALL = :
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Added: trunk/packages/emboss/branches/upstream/current/test/wormpep/Makefile
===================================================================
--- trunk/packages/emboss/branches/upstream/current/test/wormpep/Makefile (rev 0)
+++ trunk/packages/emboss/branches/upstream/current/test/wormpep/Makefile 2008-01-10 05:25:29 UTC (rev 1084)
@@ -0,0 +1,379 @@
+# Makefile.in generated by automake 1.10 from Makefile.am.
+# test/wormpep/Makefile. Generated from Makefile.in by configure.
+
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005, 2006 Free Software Foundation, Inc.
+# This Makefile.in is free software; the Free Software Foundation
+# gives unlimited permission to copy and/or distribute it,
+# with or without modifications, as long as this notice is preserved.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
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+abs_top_builddir = /m2/emboss/emboss
+abs_top_srcdir = /m2/emboss/emboss
+ac_ct_CC = gcc
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+ac_ct_F77 = gfortran
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+am__quote =
+am__tar = ${AMTAR} chof - "$$tardir"
+am__untar = ${AMTAR} xf -
+bindir = ${exec_prefix}/bin
+build = x86_64-unknown-linux-gnu
+build_alias =
+build_cpu = x86_64
+build_os = linux-gnu
+build_vendor = unknown
+builddir = .
+datadir = ${datarootdir}
+datarootdir = ${prefix}/share
+docdir = ${datarootdir}/doc/${PACKAGE}
+dvidir = ${docdir}
+exec_prefix = ${prefix}
+havejavac =
+host = x86_64-unknown-linux-gnu
+host_alias =
+host_cpu = x86_64
+host_os = linux-gnu
+host_vendor = unknown
+htmldir = ${docdir}
+includedir = ${prefix}/include
+infodir = ${datarootdir}/info
+install_sh = $(SHELL) /m2/emboss/emboss/install-sh
+libdir = ${exec_prefix}/lib
+libexecdir = ${exec_prefix}/libexec
+localedir = ${datarootdir}/locale
+localstatedir = ${prefix}/var
+mandir = ${datarootdir}/man
+mkdir_p = /bin/mkdir -p
+oldincludedir = /usr/include
+pdfdir = ${docdir}
+prefix = /usr/local
+program_transform_name = s,x,x,
+psdir = ${docdir}
+sbindir = ${exec_prefix}/sbin
+sharedstatedir = ${prefix}/com
+srcdir = .
+sysconfdir = ${prefix}/etc
+target_alias =
+top_builddir = ../..
+top_srcdir = ../..
+pkgdata_DATA = wormpep acnum.hit acnum.trg division.lkp entrynam.idx \
+ des.hit des.trg
+
+all: all-am
+
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+ @for dep in $?; do \
+ case '$(am__configure_deps)' in \
+ *$$dep*) \
+ cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+ && exit 0; \
+ exit 1;; \
+ esac; \
+ done; \
+ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu test/wormpep/Makefile'; \
+ cd $(top_srcdir) && \
+ $(AUTOMAKE) --gnu test/wormpep/Makefile
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+ *config.status*) \
+ cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+ *) \
+ echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+ cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+ esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+ cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: $(am__configure_deps)
+ cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): $(am__aclocal_m4_deps)
+ cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+mostlyclean-libtool:
+ -rm -f *.lo
+
+clean-libtool:
+ -rm -rf .libs _libs
+install-pkgdataDATA: $(pkgdata_DATA)
+ @$(NORMAL_INSTALL)
+ test -z "$(pkgdatadir)" || $(MKDIR_P) "$(DESTDIR)$(pkgdatadir)"
+ @list='$(pkgdata_DATA)'; for p in $$list; do \
+ if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
+ f=$(am__strip_dir) \
+ echo " $(pkgdataDATA_INSTALL) '$$d$$p' '$(DESTDIR)$(pkgdatadir)/$$f'"; \
+ $(pkgdataDATA_INSTALL) "$$d$$p" "$(DESTDIR)$(pkgdatadir)/$$f"; \
+ done
+
+uninstall-pkgdataDATA:
+ @$(NORMAL_UNINSTALL)
+ @list='$(pkgdata_DATA)'; for p in $$list; do \
+ f=$(am__strip_dir) \
+ echo " rm -f '$(DESTDIR)$(pkgdatadir)/$$f'"; \
+ rm -f "$(DESTDIR)$(pkgdatadir)/$$f"; \
+ done
+tags: TAGS
+TAGS:
+
+ctags: CTAGS
+CTAGS:
+
+
+distdir: $(DISTFILES)
+ @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+ topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+ list='$(DISTFILES)'; \
+ dist_files=`for file in $$list; do echo $$file; done | \
+ sed -e "s|^$$srcdirstrip/||;t" \
+ -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \
+ case $$dist_files in \
+ */*) $(MKDIR_P) `echo "$$dist_files" | \
+ sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \
+ sort -u` ;; \
+ esac; \
+ for file in $$dist_files; do \
+ if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
+ if test -d $$d/$$file; then \
+ dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
+ if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
+ cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \
+ fi; \
+ cp -pR $$d/$$file $(distdir)$$dir || exit 1; \
+ else \
+ test -f $(distdir)/$$file \
+ || cp -p $$d/$$file $(distdir)/$$file \
+ || exit 1; \
+ fi; \
+ done
+check-am: all-am
+check: check-am
+all-am: Makefile $(DATA)
+installdirs:
+ for dir in "$(DESTDIR)$(pkgdatadir)"; do \
+ test -z "$$dir" || $(MKDIR_P) "$$dir"; \
+ done
+install: install-am
+install-exec: install-exec-am
+install-data: install-data-am
+uninstall: uninstall-am
+
+install-am: all-am
+ @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am
+
+installcheck: installcheck-am
+install-strip:
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ `test -z '$(STRIP)' || \
+ echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
+mostlyclean-generic:
+
+clean-generic:
+
+distclean-generic:
+ -test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+
+maintainer-clean-generic:
+ @echo "This command is intended for maintainers to use"
+ @echo "it deletes files that may require special tools to rebuild."
+clean: clean-am
+
+clean-am: clean-generic clean-libtool mostlyclean-am
+
+distclean: distclean-am
+ -rm -f Makefile
+distclean-am: clean-am distclean-generic
+
+dvi: dvi-am
+
+dvi-am:
+
+html: html-am
+
+info: info-am
+
+info-am:
+
+install-data-am: install-pkgdataDATA
+
+install-dvi: install-dvi-am
+
+install-exec-am:
+
+install-html: install-html-am
+
+install-info: install-info-am
+
+install-man:
+
+install-pdf: install-pdf-am
+
+install-ps: install-ps-am
+
+installcheck-am:
+
+maintainer-clean: maintainer-clean-am
+ -rm -f Makefile
+maintainer-clean-am: distclean-am maintainer-clean-generic
+
+mostlyclean: mostlyclean-am
+
+mostlyclean-am: mostlyclean-generic mostlyclean-libtool
+
+pdf: pdf-am
+
+pdf-am:
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+ps: ps-am
+
+ps-am:
+
+uninstall-am: uninstall-pkgdataDATA
+
+.MAKE: install-am install-strip
+
+.PHONY: all all-am check check-am clean clean-generic clean-libtool \
+ distclean distclean-generic distclean-libtool distdir dvi \
+ dvi-am html html-am info info-am install install-am \
+ install-data install-data-am install-dvi install-dvi-am \
+ install-exec install-exec-am install-html install-html-am \
+ install-info install-info-am install-man install-pdf \
+ install-pdf-am install-pkgdataDATA install-ps install-ps-am \
+ install-strip installcheck installcheck-am installdirs \
+ maintainer-clean maintainer-clean-generic mostlyclean \
+ mostlyclean-generic mostlyclean-libtool pdf pdf-am ps ps-am \
+ uninstall uninstall-am uninstall-pkgdataDATA
+
+# Tell versions [3.59,3.63) of GNU make to not export all variables.
+# Otherwise a system limit (for SysV at least) may be exceeded.
+.NOEXPORT:
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