[med-svn] r1195 - trunk/packages/autodocksuite/trunk/debian

[smoe-guest at alioth.debian.org]

Author: smoe-guest
Date: 2008-01-24 12:52:04 +0000 (Thu, 24 Jan 2008)
New Revision: 1195

Modified:
   trunk/packages/autodocksuite/trunk/debian/autogrid4.1
   trunk/packages/autodocksuite/trunk/debian/changelog
   trunk/packages/autodocksuite/trunk/debian/control
   trunk/packages/autodocksuite/trunk/debian/copyright
Log:
Updated email address, improved man page of autogrid4.


Modified: trunk/packages/autodocksuite/trunk/debian/autogrid4.1
===================================================================
--- trunk/packages/autodocksuite/trunk/debian/autogrid4.1	2008-01-24 11:22:53 UTC (rev 1194)
+++ trunk/packages/autodocksuite/trunk/debian/autogrid4.1	2008-01-24 12:52:04 UTC (rev 1195)
@@ -19,16 +19,43 @@
 autogrid \- preparing protein and ligand for autodock analysis
 .SH SYNOPSIS
 .B autogrid4
-.RI [ options ] " files" ...
+.RI [ options ]
+-p
+.RI gridparameterfile
 .SH DESCRIPTION
-The maintainer of the Debian package does not yet feel sufficiently competent to prepare this man page. Please help.
+.B autogrid4
+prepares a 3D grid representation of the non-binding forces that a
+point charge will experience at any location around the protein or
+in its binding pocket. The grid is calculated for all the atom types
+that are known to autodock. The input to
+.RI autogrid4
+is best prepared with the program suite
+.RI autodocktools.
+There is no way to run
+.RI autodock4
+without a grid.
 .PP
 .\" TeX users may be more comfortable with the \fB<whatever>\fP and
 .\" \fI<whatever>\fP escape sequences to invode bold face and italics, 
 .\" respectively.
 .SH OPTIONS
-completely unknown.
+.TP
+\fB\-o\fR
+Use old PDBq format (q in columns 55-61)
 
+.TP
+.B \-d
+Increased verbosity of messages to help debugging.
+
+.TP
+.B \-l
+.RI logfile
+
+.TP
+.B \-p
+.RI filename
+Specifies Grid Parameter File
+
 .SH SEE ALSO
 .BR autodock (1),
 .BR runAdt (1).

Modified: trunk/packages/autodocksuite/trunk/debian/changelog
===================================================================
--- trunk/packages/autodocksuite/trunk/debian/changelog	2008-01-24 11:22:53 UTC (rev 1194)
+++ trunk/packages/autodocksuite/trunk/debian/changelog	2008-01-24 12:52:04 UTC (rev 1195)
@@ -2,5 +2,5 @@
 
   * Initial release (Closes: #434654)
 
- -- Steffen Moeller <steffen_moeller at gmx.de>  Mon, 23 Jul 2007 16:41:48 +0200
+ -- Steffen Moeller <moeller at debian.org>  Mon, 23 Jul 2007 16:41:48 +0200
 

Modified: trunk/packages/autodocksuite/trunk/debian/control
===================================================================
--- trunk/packages/autodocksuite/trunk/debian/control	2008-01-24 11:22:53 UTC (rev 1194)
+++ trunk/packages/autodocksuite/trunk/debian/control	2008-01-24 12:52:04 UTC (rev 1195)
@@ -1,7 +1,7 @@
 Source: autodocksuite
 Section: science
 Priority: optional
-Maintainer: Steffen Moeller <steffen_moeller at gmx.de>
+Maintainer: Steffen Moeller <moeller at debian.org>
 Build-Depends: debhelper (>= 5)
 Standards-Version: 3.7.2
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/autodocksuite/trunk/

Modified: trunk/packages/autodocksuite/trunk/debian/copyright
===================================================================
--- trunk/packages/autodocksuite/trunk/debian/copyright	2008-01-24 11:22:53 UTC (rev 1194)
+++ trunk/packages/autodocksuite/trunk/debian/copyright	2008-01-24 12:52:04 UTC (rev 1195)
@@ -1,4 +1,4 @@
-This package was debianized by Steffen Moeller <steffen_moeller at gmx.de> on
+This package was debianized by Steffen Moeller <moeller at debian.org> on
 Mon, 23 Jul 2007 16:41:48 +0200.
 
 It was downloaded from http://autodock.scripps.edu/downloads
@@ -9,12 +9,13 @@
 	Max Chang
 	Rik Belew
 	Scott Halliday
-	Bill Hart
+	Scott Kurowski <scott at scottkurowski.com>
+	Bill Hart <wehart at sandia.gov>
 	Garrett M. Morris <garrett at scripps.edu>, 
 	David S. Goodsell <goodsell at scripps.edu>
 	Ruth Huey <rhuey at scripps.edu>
+	Richard K. Belew <rik at cogsci@ucsd.edu>
 	Arthur J. Olson
-	Richard Belew
 
 Copyright: 
 
@@ -23,12 +24,13 @@
 	Max Chang
 	Rik Belew
 	Scott Halliday
-	Bill Hart
+	Scott Kurowski <scott at scottkurowski.com>
+	Bill Hart <wehart at sandia.gov>
 	Garrett M. Morris <garrett at scripps.edu>
 	David S. Goodsell <goodsell at scripps.edu>
 	Ruth Huey <rhuey at scripps.edu>
+	Richard K. Belew <rik at cogsci@ucsd.edu>
 	Arthur J. Olson
-	Richard Belew
 	and The Scripps Research Institute <autodock at scripps.edu>
 
 License:
@@ -52,5 +54,5 @@
 On Debian systems, the complete text of the GNU General
 Public License can be found in `/usr/share/common-licenses/GPL'.
 
-The Debian packaging is (C) 2007, Steffen Moeller <steffen_moeller at gmx.de> and
+The Debian packaging is (C) 2007, Steffen Moeller <moeller at debian.org> and
 is licensed under the GPL, see above.