[med-svn] r1586 - in trunk/packages/gbrowse-karyotype/trunk: . debian

charles-guest at alioth.debian.org charles-guest at alioth.debian.org
Fri Mar 14 08:26:22 UTC 2008


Author: charles-guest
Date: 2008-03-14 08:26:21 +0000 (Fri, 14 Mar 2008)
New Revision: 1586

Added:
   trunk/packages/gbrowse-karyotype/trunk/debian/
   trunk/packages/gbrowse-karyotype/trunk/debian/README.Debian
   trunk/packages/gbrowse-karyotype/trunk/debian/changelog
   trunk/packages/gbrowse-karyotype/trunk/debian/compat
   trunk/packages/gbrowse-karyotype/trunk/debian/control
   trunk/packages/gbrowse-karyotype/trunk/debian/copyright
   trunk/packages/gbrowse-karyotype/trunk/debian/dirs
   trunk/packages/gbrowse-karyotype/trunk/debian/patches/
   trunk/packages/gbrowse-karyotype/trunk/debian/rules
Log:
Importing work in progress?\226?\128?\166


Property changes on: trunk/packages/gbrowse-karyotype/trunk/debian
___________________________________________________________________
Name: mergeWithUpstream
   + 1

Added: trunk/packages/gbrowse-karyotype/trunk/debian/README.Debian
===================================================================
--- trunk/packages/gbrowse-karyotype/trunk/debian/README.Debian	                        (rev 0)
+++ trunk/packages/gbrowse-karyotype/trunk/debian/README.Debian	2008-03-14 08:26:21 UTC (rev 1586)
@@ -0,0 +1,12 @@
+GBrowse for Debian
+---------------------------------
+
+Current pacakging bugs :
+
+ - Paths such as /home/charles/src/gbrowse-1.68/debian/gbrowse/var/www/gbrowse/databases in html files.
+ - Owner of /var/www/gbrowse/database and gbrowse/tmp
+ - MSG: Directory /tmp/test does not exist and you did not specify the -create flag
+ - dependancies not proofchecked, dh_perl not used.
+ - contrib scripts not installed.
+
+ -- Charles Plessy <charles-debian-nospam at plessy.org>  Wed, 13 Jun 2007 19:07:01 +0900

Added: trunk/packages/gbrowse-karyotype/trunk/debian/changelog
===================================================================
--- trunk/packages/gbrowse-karyotype/trunk/debian/changelog	                        (rev 0)
+++ trunk/packages/gbrowse-karyotype/trunk/debian/changelog	2008-03-14 08:26:21 UTC (rev 1586)
@@ -0,0 +1,6 @@
+gbrowse-karyotype (cvs20071113-1) unstable; urgency=low
+
+  * Initial release (Closes: #nnnn)  <nnnn is the bug number of your ITP>
+
+ -- Charles Plessy <charles-debian-nospam at plessy.org>  Wed, 13 Jun 2007 19:07:01 +0900
+

Added: trunk/packages/gbrowse-karyotype/trunk/debian/compat
===================================================================
--- trunk/packages/gbrowse-karyotype/trunk/debian/compat	                        (rev 0)
+++ trunk/packages/gbrowse-karyotype/trunk/debian/compat	2008-03-14 08:26:21 UTC (rev 1586)
@@ -0,0 +1 @@
+5

Added: trunk/packages/gbrowse-karyotype/trunk/debian/control
===================================================================
--- trunk/packages/gbrowse-karyotype/trunk/debian/control	                        (rev 0)
+++ trunk/packages/gbrowse-karyotype/trunk/debian/control	2008-03-14 08:26:21 UTC (rev 1586)
@@ -0,0 +1,14 @@
+Source: gbrowse-karyotype
+Section: science
+Priority: optional
+Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Charles Plessy <charles-debian-nospam at plessy.org>
+Build-Depends: debhelper (>= 5), quilt
+Standards-Version: 3.7.2
+XS-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/gbrowse/trunk/
+XS-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/gbrowse
+Homepage: http://www.gmod.org/
+
+Package: gbrowse-karyotype
+Architecture: all
+Description: work in progress 

Added: trunk/packages/gbrowse-karyotype/trunk/debian/copyright
===================================================================
--- trunk/packages/gbrowse-karyotype/trunk/debian/copyright	                        (rev 0)
+++ trunk/packages/gbrowse-karyotype/trunk/debian/copyright	2008-03-14 08:26:21 UTC (rev 1586)
@@ -0,0 +1,31 @@
+This package was debianized by Charles Plessy <charles-debian-nospam at plessy.org> on
+Wed, 13 Jun 2007 19:07:01 +0900.
+
+It was downloaded from the GMOD SourceForge project
+with the command: cvs -d:pserver:anonymous at gmod.cvs.sourceforge.net:/cvsroot/gmod export -r HEAD GBrowse_karyotype 
+
+
+Upstream Author: <put author(s) name and email here>
+
+Copyright: <put the year(s) of the copyright, and the names of the
+            copyright holder(s) here>
+
+License:
+
+    This program is free software; you can redistribute it and/or modify it
+    under the terms of the "Artistic License" which comes with Debian.
+
+    THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED 
+    WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES 
+    OF MERCHANTIBILITY AND FITNESS FOR A PARTICULAR PURPOSE.
+
+On Debian systems, the complete text of the Artistic License 
+can be found in `/usr/share/common-licenses/Artistic'.
+
+The Debian packaging is (C) 2007, Charles Plessy <charles-debian-nospam at plessy.org> and
+is licensed under the GPL, see `/usr/share/common-licenses/GPL'.
+
+
+# Please also look if there are files or directories which have a
+# different copyright/license attached and list them here.
+

Added: trunk/packages/gbrowse-karyotype/trunk/debian/dirs
===================================================================
--- trunk/packages/gbrowse-karyotype/trunk/debian/dirs	                        (rev 0)
+++ trunk/packages/gbrowse-karyotype/trunk/debian/dirs	2008-03-14 08:26:21 UTC (rev 1586)
@@ -0,0 +1,2 @@
+usr/bin
+usr/share/man/man1

Added: trunk/packages/gbrowse-karyotype/trunk/debian/rules
===================================================================
--- trunk/packages/gbrowse-karyotype/trunk/debian/rules	                        (rev 0)
+++ trunk/packages/gbrowse-karyotype/trunk/debian/rules	2008-03-14 08:26:21 UTC (rev 1586)
@@ -0,0 +1,88 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+
+include /usr/share/quilt/quilt.make
+
+configure: configure-stamp
+configure-stamp:
+	dh_testdir
+	perl Makefile.PL \
+		DESTDIR=$(CURDIR)/debian/gbrowse-karyotype \
+		CGIBIN=/usr/lib/cgi-bin \
+		CONF=/etc/ \
+		HTDOCS=/var/www \
+		INSTALLDIRS=vendor \
+		VENDORARCHEXP=/usr/share/perl5 \
+		APACHE=/usr/sbin/apache2 \
+		CONF=/etc/ \
+		BIN=/usr/bin
+	touch configure-stamp
+
+build: patch build-stamp
+build-stamp: configure-stamp 
+	dh_testdir
+	$(MAKE) OPTIMIZE="-O2 -g -Wall"
+	touch $@
+
+clean: unpatch configure-stamp
+	dh_testdir
+	dh_testroot
+	rm -f build-stamp configure-stamp
+	$(MAKE) clean
+	dh_clean 
+
+install: build
+	dh_testdir
+	dh_testroot
+	dh_clean -k 
+	dh_installdirs
+	perl Makefile.PL \
+		DESTDIR=$(CURDIR)/debian/gbrowse-karyotype \
+		CGIBIN=$(CURDIR)/debian/gbrowse-karyotype/usr/lib/cgi-bin \
+		CONF=$(CURDIR)/debian/gbrowse-karyotype/etc/ \
+		HTDOCS=$(CURDIR)/debian/gbrowse-karyotype/var/www \
+		INSTALLDIRS=vendor \
+		VENDORARCHEXP=$(CURDIR)/debian/gbrowse-karyotype/usr/share/perl5 \
+		APACHE=/usr/sbin/apache2 \
+		CONF=$(CURDIR)/debian/gbrowse-karyotype/etc/ \
+		BIN=/usr/bin
+	$(MAKE) install
+	mv $(CURDIR)/debian/gbrowse-karyotype/var/www/gbrowse/DISCLAIMER $(CURDIR)/debian/gbrowse-karyotype/var/www/gbrowse/DISCLAIMER.gbrowse-karyotype
+	#Bio::Glyph is already provided by gbrowse
+	rm -r $(CURDIR)/debian/gbrowse-karyotype/usr/share/perl5
+	rm -r $(CURDIR)/debian/gbrowse-karyotype/usr/share/man/man3
+
+binary-indep: build install
+
+binary-arch: build install
+	dh_testdir
+	dh_testroot
+	dh_installchangelogs
+	dh_installdocs
+	dh_installexamples
+#	dh_install
+#	dh_installmenu
+#	dh_installdebconf	
+#	dh_installlogrotate
+#	dh_installemacsen
+#	dh_installpam
+#	dh_installmime
+#	dh_python
+#	dh_installinit
+#	dh_installcron
+#	dh_installinfo
+	dh_installman
+	dh_link
+	dh_strip
+	dh_compress
+	dh_fixperms
+#	dh_perl
+#	dh_makeshlibs
+	dh_installdeb
+	dh_shlibdeps
+	dh_gencontrol
+	dh_md5sums
+	dh_builddeb
+
+binary: binary-indep binary-arch
+.PHONY: build clean binary-indep binary-arch binary install configure


Property changes on: trunk/packages/gbrowse-karyotype/trunk/debian/rules
___________________________________________________________________
Name: svn:executable
   + *




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