[med-svn] r4470 - in trunk/packages/amide/tags: . amide_0.9.1-5 amide_0.9.1-5/debian amide_0.9.1-5/debian/patches amide_0.9.2-1 amide_0.9.2-1/debian amide_0.9.2-1/debian/patches

Dominique Belhachemi domibel-guest at alioth.debian.org
Sun Dec 20 21:27:33 UTC 2009


Author: domibel-guest
Date: 2009-12-20 21:27:33 +0000 (Sun, 20 Dec 2009)
New Revision: 4470

Added:
   trunk/packages/amide/tags/amide_0.9.1-5/
   trunk/packages/amide/tags/amide_0.9.1-5/debian/
   trunk/packages/amide/tags/amide_0.9.1-5/debian/README.Debian
   trunk/packages/amide/tags/amide_0.9.1-5/debian/amide.doc-base
   trunk/packages/amide/tags/amide_0.9.1-5/debian/amide.menu
   trunk/packages/amide/tags/amide_0.9.1-5/debian/amide_logo_small.xpm
   trunk/packages/amide/tags/amide_0.9.1-5/debian/autogen.sh
   trunk/packages/amide/tags/amide_0.9.1-5/debian/changelog
   trunk/packages/amide/tags/amide_0.9.1-5/debian/compat
   trunk/packages/amide/tags/amide_0.9.1-5/debian/control
   trunk/packages/amide/tags/amide_0.9.1-5/debian/copyright
   trunk/packages/amide/tags/amide_0.9.1-5/debian/deletable.files
   trunk/packages/amide/tags/amide_0.9.1-5/debian/dirs
   trunk/packages/amide/tags/amide_0.9.1-5/debian/docs
   trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/
   trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/00list
   trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/50_configure.in.dpatch
   trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/60_makefile.am.dpatch
   trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/70_src_makefile.am.dpatch
   trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/80_etc_amide.desktop.in.dpatch
   trunk/packages/amide/tags/amide_0.9.1-5/debian/rules
   trunk/packages/amide/tags/amide_0.9.1-5/debian/watch
   trunk/packages/amide/tags/amide_0.9.2-1/
   trunk/packages/amide/tags/amide_0.9.2-1/debian/
   trunk/packages/amide/tags/amide_0.9.2-1/debian/README.Debian
   trunk/packages/amide/tags/amide_0.9.2-1/debian/README.source
   trunk/packages/amide/tags/amide_0.9.2-1/debian/amide.doc-base
   trunk/packages/amide/tags/amide_0.9.2-1/debian/amide.menu
   trunk/packages/amide/tags/amide_0.9.2-1/debian/amide_logo_small.xpm
   trunk/packages/amide/tags/amide_0.9.2-1/debian/autogen.sh
   trunk/packages/amide/tags/amide_0.9.2-1/debian/changelog
   trunk/packages/amide/tags/amide_0.9.2-1/debian/compat
   trunk/packages/amide/tags/amide_0.9.2-1/debian/control
   trunk/packages/amide/tags/amide_0.9.2-1/debian/copyright
   trunk/packages/amide/tags/amide_0.9.2-1/debian/deletable.files
   trunk/packages/amide/tags/amide_0.9.2-1/debian/dirs
   trunk/packages/amide/tags/amide_0.9.2-1/debian/docs
   trunk/packages/amide/tags/amide_0.9.2-1/debian/get-orig-source
   trunk/packages/amide/tags/amide_0.9.2-1/debian/patches/
   trunk/packages/amide/tags/amide_0.9.2-1/debian/patches/10_all.diff
   trunk/packages/amide/tags/amide_0.9.2-1/debian/patches/series
   trunk/packages/amide/tags/amide_0.9.2-1/debian/rules
   trunk/packages/amide/tags/amide_0.9.2-1/debian/watch
Log:
tagging amide 0.9.1-5 and 0.9.2-1

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/README.Debian
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/README.Debian	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/README.Debian	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,6 @@
+amide for Debian
+----------------
+
+This package comes without libfame support because of the non-free license.
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 16 Dec 2007 21:32:15 +0200

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/amide.doc-base
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/amide.doc-base	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/amide.doc-base	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,11 @@
+Document: amide
+Title: Debian amide Manual
+Author: Andy Loening
+Abstract: This manual describes what amide is
+ and how it can be used to
+ analyze medical imaging data sets.
+Section: Science/Medicine
+
+Format: HTML
+Index: /usr/share/gtk-doc/html/amitk/index.html
+Files: /usr/share/gtk-doc/html/amitk/*.html

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/amide.menu
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/amide.menu	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/amide.menu	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,3 @@
+?package(amide):command="/usr/bin/amide" icon="/usr/share/pixmaps/amide_logo_small.xpm" needs="X11" \
+        section="Applications/Science/Medicine" title="AMIDE"
+

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/amide_logo_small.xpm
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/amide_logo_small.xpm	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/amide_logo_small.xpm	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,367 @@
+/* XPM */
+static char * amide_logo_small_xpm[] = {
+"32 32 332 2",
+"  	c None",
+". 	c #3230B9",
+"+ 	c #2F2DA9",
+"@ 	c #2F2DA4",
+"# 	c #2F2DA3",
+"$ 	c #302E9A",
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+"& 	c #343396",
+"* 	c #2F2D8C",
+"= 	c #2F2D84",
+"- 	c #2F2D87",
+"; 	c #2F2D8A",
+"> 	c #2F2D8D",
+", 	c #2F2D8E",
+"' 	c #2F2D89",
+") 	c #2F2D85",
+"! 	c #2F2D82",
+"~ 	c #2E2D61",
+"{ 	c #33317E",
+"] 	c #2F2D93",
+"^ 	c #2F2D98",
+"/ 	c #2F2D9B",
+"( 	c #2F2D9C",
+"_ 	c #2F2D9A",
+": 	c #2F2D96",
+"< 	c #2F2D91",
+"[ 	c #2F2D83",
+"} 	c #2F2D81",
+"| 	c #2F2D73",
+"1 	c #1B1A25",
+"2 	c #2F2D4D",
+"3 	c #2E2C69",
+"4 	c #2F2D8B",
+"5 	c #2F2D97",
+"6 	c #2F2DA7",
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+"                                                                ",
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Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/autogen.sh
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/autogen.sh	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/autogen.sh	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,72 @@
+#!/bin/sh
+#
+#
+#
+# Requires: automake 1.9, autoconf 2.57+
+# Conflicts: autoconf 2.13
+set -e
+
+# Refresh GNU autotools toolchain.
+echo Cleaning autotools files...
+find -type d -name autom4te.cache -print0 | xargs -0 rm -rf \;
+find -type f \( -name missing -o -name install-sh -o -name mkinstalldirs \
+	-o -name depcomp -o -name ltmain.sh -o -name configure \
+	-o -name config.sub -o -name config.guess \
+	-o -name Makefile.in \) -print0 | xargs -0 rm -f
+
+echo Running autoreconf...
+#autoreconf --force --install
+
+
+   # Add here commands to configure the package.
+   intltoolize --copy --force --automake
+   aclocal -I m4
+   libtoolize -f -c
+   automake -f -a -c
+   autoconf -f
+ #  rm -rf autom4te.cache
+
+
+# For the Debian package build
+test -d debian && {
+	# link these in Debian builds
+	rm -f config.sub config.guess
+	ln -s /usr/share/misc/config.sub .
+	ln -s /usr/share/misc/config.guess .
+
+	# refresh list of executable scripts, to avoid possible breakage if
+	# upstream tarball does not include the file or if it is mispackaged
+	# for whatever reason.
+	[ "$1" == "updateexec" ] && {
+		echo Generating list of executable files...
+		rm -f debian/executable.files
+		find -type f -perm +111 ! -name '.*' -fprint debian/executable.files
+	}
+
+	# Remove any files in upstream tarball that we don't have in the Debian
+	# package (because diff cannot remove files)
+	version=`dpkg-parsechangelog | awk '/Version:/ { print $2 }' | sed -e 's/-[^-]\+$//'`
+	source=`dpkg-parsechangelog | awk '/Source:/ { print $2 }' | tr -d ' '`
+	if test -r ../${source}_${version}.orig.tar.gz ; then
+		echo Generating list of files that should be removed...
+		rm -f debian/deletable.files
+		touch debian/deletable.files
+		[ -e debian/tmp ] && rm -rf debian/tmp
+		mkdir debian/tmp
+		( cd debian/tmp ; tar -zxf ../../../${source}_${version}.orig.tar.gz )
+		find debian/tmp/ -type f ! -name '.*' -print0 | xargs -0 -ri echo '{}' | \
+		  while read -r i ; do
+			if test -e "${i}" ; then
+				filename=$(echo "${i}" | sed -e 's#.*debian/tmp/[^/]\+/##')
+				test -e "${filename}" || echo "${filename}" >>debian/deletable.files
+			fi
+		  done
+		rm -fr debian/tmp
+	else
+		echo Emptying list of files that should be deleted...
+		rm -f debian/deletable.files
+		touch debian/deletable.files
+	fi
+}
+
+exit 0

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/changelog
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/changelog	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/changelog	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,90 @@
+amide (0.9.1-5) unstable; urgency=low
+
+  * debian/control: removed build dependency to libglib1.2-dev
+                    and libglib1.2-dev (Closes: #523561)
+  * debian/control: Standards-Version: 3.8.1
+  * debian/changelog: updated references to GPL-2 and LGPL-2
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 12 Apr 2009 13:01:46 -0400
+
+amide (0.9.1-4) unstable; urgency=low
+
+   * debian/compat: bumped up to 7
+   * debian/rules: uses "dh_prep" now instead of "dh_clean -k"
+   * desktop category is now: Categories=Graphics;MedicalSoftware;
+   * Add var/lib/scrollkeeper to debian/dirs to so that scrollkeeper-update
+     can use it when run by the build system.
+   * debugging symbols disabled
+   * debian/copyright: is now machine-interpretable
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Wed, 19 Feb 2009 09:21:05 -0500
+
+amide (0.9.1-3) unstable; urgency=low
+
+  * fixed lintian warning: doc-base-uses-applications-section
+  * debian/control: Standards-Version: 3.8.0
+  * debian/control: DM-Upload-Allowed: yes
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Fri, 14 Nov 2008 17:10:08 +0100
+
+amide (0.9.1-2) unstable; urgency=low
+
+   * debian/control: removed builddep libniftiio1-dev (Closes: #460358)
+   * fixed implicit pointer conversion (Closes: #457987)
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 13 Jan 2008 10:53:11 +0200
+
+
+amide (0.9.1-1) unstable; urgency=low
+
+   * New upstream release
+   * debian-policy 3.7.3 ready
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Thu, 20 Dec 2007 22:33:35 +0200
+
+
+amide (0.8.22-2) unstable; urgency=low
+
+  * debian/control: libvolpack1-dev added
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 16 Dec 2007 23:13:12 +0200
+
+
+amide (0.8.22-1) unstable; urgency=low
+
+   * New upstream release
+   * make use of autoconf in debian/rules file
+   * small bug-fixes
+   * Back to menu-1 format
+   * all changes can be found in debian/patches folder
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sat, 23 Nov 2007 19:13:12 +0200
+
+
+amide (0.8.21-4) unstable; urgency=low
+
+  * debian/control: libniftiio1-dev dependency is updated
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Mon, 16 Sep 2007 22:10:46 +0200
+
+
+amide (0.8.21-3) unstable; urgency=low
+
+  * debian/copyright : Add documentation license (GFDL) without optional features.
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sat, 28 Jul 2007 02:54:46 +0200
+
+
+amide (0.8.21-2) unstable; urgency=low
+
+  * Add missing libglib1.2-dev dependency.
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Wed, 18 Jul 2007 01:42:45 +0200
+
+
+amide (0.8.21-1) unstable; urgency=low
+
+  * Initial release (Closes: #409913)
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 15 Jul 2007 21:32:15 +0200
+

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/compat
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/compat	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/compat	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1 @@
+7

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/control
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/control	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/control	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,22 @@
+Source: amide
+Section: graphics
+Priority: optional
+Maintainer: Dominique Belhachemi <domibel at cs.tu-berlin.de>
+DM-Upload-Allowed: yes
+Build-Depends: gnome-doc-utils, gtk-doc-tools, libtool, automake, intltool,
+ dpatch, debhelper (>= 7), autotools-dev, scrollkeeper, libxml-parser-perl, m4,
+ pkg-config, libgtk2.0-dev, libxml2-dev, libgnomecanvas2-dev,
+ libgnomeui-dev, libgsl0-dev, libmdc2-dev, libdcmtk1-dev, libvolpack1-dev
+Standards-Version: 3.8.1
+Homepage: http://amide.sourceforge.net/
+
+Package: amide
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: software for Medical Imaging
+ AMIDE: (Amide's a Medical Imaging Data Examiner)
+ AMIDE is a tool for viewing and analyzing medical image data sets.
+ It's capabilities include the simultaneous handling of multiple data
+ sets imported from a variety of file formats, image fusion, 3D region
+ of interest drawing and analysis, volume rendering, and rigid body
+ alignments.

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/copyright
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/copyright	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/copyright	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,81 @@
+Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat
+Debianized-By: Dominique Belhachemi <domibel at cs.tu-berlin.de>
+Debianized-Date: Fri, 20 Apr 2007 21:32:15 +0200
+Original-Source: http://amide.sourceforge.net/
+
+
+Files: debian/*
+Copyright: 2008, Dominique Belhachemi <domibel at cs.tu-berlin.de>
+License: GPL-2+
+ The Debian packaging is licensed under the GPL-2 or any later version,
+ see `/usr/share/common-licenses/GPL-2'
+
+
+Files: *
+Copyright:
+ Copyright (©) 2007 by Andy Loening <loening at alum.mit.edu>
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this package; if not, write to the Free Software
+ Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+ .
+ On Debian systems, the complete text of the GNU General Public 
+ License, version 2 can be found in `/usr/share/common-licenses/GPL-2'.
+
+
+Files:
+ ./src/amitk_xif_sel.h
+ ./src/amitk_xif_sel.c
+ ./src/amitk_dial.h
+ ./src/amitk_dial.c
+Copyright:
+ Copyright (©) 2007 by Andy Loening <loening at alum.mit.edu>
+License: LGPL-2+
+ This library is free software; you can redistribute it and/or
+ modify it under the terms of the GNU Lesser General Public
+ License as published by the Free Software Foundation; either
+ version 2 of the License, or (at your option) any later version.
+ .
+ This library is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+ Lesser General Public License for more details.
+ .
+ You should have received a copy of the GNU Lesser General Public
+ License along with this library; if not, write to the
+ Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston,
+ MA 02110-1301, USA.
+ .
+ On Debian systems, the complete text of the GNU Lesser General Public
+ License, version 2.0 can be found in `/usr/share/common-licenses/LGPL-2'.
+
+
+Files:
+ Documentation
+Copyright:
+ Copyright (©) 2007 by Andy Loening <loening at alum.mit.edu>
+License: GFDL-1.1
+ Permission is granted to copy, distribute and/or modify
+ this document under the terms of the GNU Free
+ Documentation License, Version 1.1 or any later
+ version published by the Free Software Foundation with no
+ Invariant Sections, no Front-Cover Texts, and no Back-Cover
+ Texts. You may obtain a copy of the GNU Free
+ Documentation License from the Free Software
+ Foundation by visiting their Web site (http://www.fsf.org) or by
+ writing to: 
+ Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston,
+ MA 02110-1301, USA.
+ .
+ On Debian systems, the complete text of the GNU Free Documentation License
+ can be found in `/usr/share/common-licenses/GFDL`

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/deletable.files
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/deletable.files	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/deletable.files	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,78 @@
+doc/reference/tmpl/amitk_data_set_SBYTE_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_USHORT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SSHORT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_object.sgml.bak
+doc/reference/tmpl/amitk_preferences.sgml.bak
+doc/reference/tmpl/amitk_data_set_UINT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_raw_data_SBYTE.sgml.bak
+doc/reference/tmpl/amitk_window_edit.sgml.bak
+doc/reference/tmpl/amitk_data_set_DOUBLE_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_canvas.sgml.bak
+doc/reference/tmpl/amitk_filter.sgml.bak
+doc/reference/tmpl/amitk_data_set_variable_type.sgml.bak
+doc/reference/tmpl/amitk_roi_variable_type.sgml.bak
+doc/reference/tmpl/tb_math.sgml.bak
+doc/reference/tmpl/amitk_color_table.sgml.bak
+doc/reference/tmpl/amitk_raw_data_SINT.sgml.bak
+doc/reference/tmpl/amitk_raw_data_UBYTE.sgml.bak
+doc/reference/tmpl/amitk_data_set_SINT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set.sgml.bak
+doc/reference/tmpl/amitk_point.sgml.bak
+doc/reference/tmpl/amitk_raw_data_UINT.sgml.bak
+doc/reference/tmpl/amitk_data_set_UBYTE_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk-unused.sgml.bak
+doc/reference/tmpl/amitk_roi_ELLIPSOID.sgml.bak
+doc/reference/tmpl/amitk_study.sgml.bak
+doc/reference/tmpl/amitk_data_set_FLOAT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_type.sgml.bak
+doc/reference/tmpl/amitk_data_set_DOUBLE_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_UINT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_UBYTE_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_raw_data_SSHORT.sgml.bak
+doc/reference/tmpl/amitk_raw_data_FLOAT.sgml.bak
+doc/reference/tmpl/amitk_data_set_SBYTE_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SSHORT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_progress_dialog.sgml.bak
+doc/reference/tmpl/amitk_space_edit.sgml.bak
+doc/reference/tmpl/amitk_marshal.sgml.bak
+doc/reference/tmpl/amide.sgml.bak
+doc/reference/tmpl/amitk_data_set_SSHORT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_line_profile.sgml.bak
+doc/reference/tmpl/amitk_roi_BOX.sgml.bak
+doc/reference/tmpl/amitk_color_table_menu.sgml.bak
+doc/reference/tmpl/amitk_roi_CYLINDER.sgml.bak
+doc/reference/tmpl/amitk_roi.sgml.bak
+doc/reference/tmpl/amitk_raw_data_variable_type.sgml.bak
+doc/reference/tmpl/amitk_data_set_FLOAT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_threshold.sgml.bak
+doc/reference/tmpl/amitk_data_set_DOUBLE_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_FREEHAND_3D.sgml.bak
+doc/reference/tmpl/stamp-amitk_type_builtins.sgml.bak
+doc/reference/tmpl/amitk_raw_data_DOUBLE.sgml.bak
+doc/reference/tmpl/amitk_data_set_UBYTE_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SINT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_ISOCONTOUR_2D.sgml.bak
+doc/reference/tmpl/amitk_canvas_object.sgml.bak
+doc/reference/tmpl/amitk_data_set_SBYTE_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_raw_data_USHORT.sgml.bak
+doc/reference/tmpl/tb_export_data_set.sgml.bak
+doc/reference/tmpl/amitk_data_set_FLOAT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amide_gnome.sgml.bak
+doc/reference/tmpl/amitk_space.sgml.bak
+doc/reference/tmpl/amitk_data_set_UINT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_USHORT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_object_dialog.sgml.bak
+doc/reference/tmpl/amitk_type_builtins.sgml.bak
+doc/reference/tmpl/amitk_data_set_USHORT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SINT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_FREEHAND_2D.sgml.bak
+doc/reference/tmpl/amitk_fiducial_mark.sgml.bak
+doc/reference/tmpl/amitk_volume.sgml.bak
+doc/reference/tmpl/amitk_common.sgml.bak
+doc/reference/tmpl/amitk_raw_data.sgml.bak
+doc/reference/tmpl/amitk_roi_ISOCONTOUR_3D.sgml.bak
+doc/reference/tmpl/amitk_tree_view.sgml.bak
+src/ui_common.c.orig
+mkinstalldirs
+pixmaps/compartmental_models.fig.bak
+pixmaps/icons.fig.bak

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/dirs
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/dirs	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/dirs	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,2 @@
+usr/bin
+var/lib/scrollkeeper

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/docs
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/docs	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/docs	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,2 @@
+todo
+

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/00list
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/00list	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/00list	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,4 @@
+50_configure.in.dpatch
+60_makefile.am.dpatch
+70_src_makefile.am.dpatch
+80_etc_amide.desktop.in.dpatch

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/50_configure.in.dpatch
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/50_configure.in.dpatch	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/50_configure.in.dpatch	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,80 @@
+#! /bin/sh /usr/share/dpatch/dpatch-run
+## 50_configure.in.dpatch by  <domibel at sid1500>
+##
+## All lines beginning with `## DP:' are a description of the patch.
+## DP: removes all the local directory entries
+
+ at DPATCH@
+diff -urNad amide-0.9.1~/configure.in amide-0.9.1/configure.in
+--- amide-0.9.1~/configure.in	2009-02-18 10:43:01.000000000 -0500
++++ amide-0.9.1/configure.in	2009-02-18 10:44:01.000000000 -0500
+@@ -42,9 +42,9 @@
+ dnl =====================================================================
+ dnl pick our optimization level, OSX's version of gcc doesn't handle -O6
+ case "$host_os" in
+-darwin*) 	CFLAGS="-g -O2 -Wall";;
+-*)		CFLAGS="-g -O6 -Wall"
+-		CXXFLAGS="-g -O6 -Wall";;
++darwin*) 	CFLAGS="-O2 -Wall";;
++*)		CFLAGS="-O6 -Wall"
++		CXXFLAGS="-O6 -Wall";;
+ esac
+ 
+ if test $CC = "gcc"; then
+@@ -61,7 +61,7 @@
+ 	read continue_with_bad_gcc
+ 	if test $continue_with_bad_gcc = "y"; then
+ 		echo "removing optimizations to reduce potential of compiler error"
+-		CFLAGS="-g -O0"
++		CFLAGS="-O0"
+ 	else
+ 		exit 1
+ 	fi
+@@ -84,16 +84,16 @@
+ 
+ dnl check for various libraries and programs that we might need
+ AM_PATH_GSL(1.1.1, FOUND_LIBGSL=yes, FOUND_LIBGSL=no)
+-AC_CHECK_LIB(ecat, matrix_open, FOUND_LIBECAT=yes, FOUND_LIBECAT=no, -L/sw/lib)
+-AC_CHECK_LIB(volpack, vpGetErrorString, FOUND_VOLPACK=yes, FOUND_VOLPACK=no, -lm -L/sw/lib -L/usr/local/lib)
++AC_CHECK_LIB(ecat, matrix_open, FOUND_LIBECAT=yes, FOUND_LIBECAT=no)
++AC_CHECK_LIB(volpack, vpGetErrorString, FOUND_VOLPACK=yes, FOUND_VOLPACK=no, -lm)
+ AM_PATH_XMEDCON(0.10.0, FOUND_XMEDCON=yes, FOUND_XMEDCON=no)
+-AM_PATH_LIBFAME(0.9.1, FOUND_LIBFAME=yes, FOUND_LIBFAME=no)
++dnl AM_PATH_LIBFAME(0.9.1, FOUND_LIBFAME=yes, FOUND_LIBFAME=no)
+ dnl AC_CHECK_LIB(libfame, fame_init, FOUND_LIBFAME=yes, FOUND_LIBFAME=no)
+ 
+ dnl switch to C++ for DCMTK library stuff - also, if pthread is on the platform, probably need that
+ AC_LANG_CPLUSPLUS
+ AC_CHECK_LIB(pthread, pthread_mutex_init, THREAD_LIBS="-lpthread", THREAD_LIBS="")
+-AC_CHECK_LIB(dcmdata, main, FOUND_DCMDATA=yes, FOUND_DCMDATA=no, -lofstd  -lz -L/usr/local/dicom/lib -L/sw/lib $THREAD_LIBS)
++AC_CHECK_LIB(dcmdata, main, FOUND_DCMDATA=yes, FOUND_DCMDATA=no, -lofstd  -lz $THREAD_LIBS)
+ 
+ 
+ dnl Let people compile without debugging information
+@@ -171,7 +171,7 @@
+ 	AC_DEFINE(AMIDE_LIBMDC_SUPPORT, 1, Define to compile with (X)MedCon)
+ 
+ 	dnl 2007.10.28 - new xmedcon's should be using glib2/gtk2, dont' have to overwrite XMEDCON_LIBS
+-	dnl XMEDCON_LIBS="-L/usr/local/lib -L/usr/local/xmedcon/lib -lmdc"
++	dnl XMEDCON_LIBS="-lmdc"
+ 	AC_SUBST(XMEDCON_LIBS)
+ else
+ 	echo "Compiling without xmedcon/libmdc file support"
+@@ -218,8 +218,8 @@
+ 
+ if (test $enable_libdcmdata = yes) && (test $FOUND_DCMDATA = yes); then
+ 	echo "Compiling with DCMTK support for DICOM files"
+-	AMIDE_LIBDCMDATA_LIBS="-L/usr/local/dicom/lib -ldcmdata -lofstd -lz $THREAD_LIBS"
+-	AMIDE_LIBDCMDATA_CFLAGS="-I/usr/local/dicom/include/dcmtk/dcmdata -I/usr/local/dicom/include/dcmtk/ofstd -I/usr/local/dicom/include -I/usr/include/dcmtk/dcmdata -I/usr/local/include/dcmtk/ofstd -I/sw/include/dcmtk/dcmdata -I/sw/include/dcmtk/ofstd -I/sw/include/dcmtk"
++	AMIDE_LIBDCMDATA_LIBS="-ldcmdata -lofstd -lz $THREAD_LIBS"
++	AMIDE_LIBDCMDATA_CFLAGS="-I/usr/include/dcmtk/dcmdata"
+ 	AC_SUBST(AMIDE_LIBDCMDATA_LIBS)
+ 	AC_SUBST(AMIDE_LIBDCMDATA_CFLAGS)
+ 	AC_DEFINE(AMIDE_LIBDCMDATA_SUPPORT, 1, Define to compile with DCMTK)
+@@ -351,6 +351,3 @@
+ dnl help/C/Makefile
+ dnl help/es/Makefile
+ 
+-dnl Move the spec file so it won't get eaten by make distclean
+-echo "Moving SPEC file to base directory"
+-mv etc/amide.spec ./

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/60_makefile.am.dpatch
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/60_makefile.am.dpatch	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/60_makefile.am.dpatch	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,16 @@
+#! /bin/sh /usr/share/dpatch/dpatch-run
+## 60_makefile.am.dpatch by  <domibel at sid1500>
+##
+## All lines beginning with `## DP:' are a description of the patch.
+## DP: removes local directory entry
+
+ at DPATCH@
+diff -urNad amide-0.9.1~/Makefile.am amide-0.9.1/Makefile.am
+--- amide-0.9.1~/Makefile.am	2009-02-18 10:35:55.000000000 -0500
++++ amide-0.9.1/Makefile.am	2009-02-18 10:36:07.000000000 -0500
+@@ -1,5 +1,4 @@
+ ACLOCAL_AMFLAGS = \
+-	-I /usr/local/share/aclocal \
+ 	-I m4
+ 
+ if DISABLE_DOC

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/70_src_makefile.am.dpatch
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/70_src_makefile.am.dpatch	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/70_src_makefile.am.dpatch	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,26 @@
+#! /bin/sh /usr/share/dpatch/dpatch-run
+## 70_src_makefile.am.dpatch by  <domibel at sid1500>
+##
+## All lines beginning with `## DP:' are a description of the patch.
+## DP: remove local directory entry
+
+ at DPATCH@
+diff -urNad amide-0.9.1~/src/Makefile.am amide-0.9.1/src/Makefile.am
+--- amide-0.9.1~/src/Makefile.am	2009-02-18 10:35:54.000000000 -0500
++++ amide-0.9.1/src/Makefile.am	2009-02-18 10:38:05.000000000 -0500
+@@ -23,13 +23,11 @@
+ 	$(GSL_CFLAGS) \
+ 	$(LIBFAME_CFLAGS) \
+ 	$(AMIDE_GTK_CFLAGS) \
+-	$(AMIDE_DEBUG_CFLAGS) \
+ 	$(AMIDE_LIBDCMDATA_CFLAGS) \
+-	-I/usr/local/include \
+ 	$(XMEDCON_CFLAGS) \
+-	-DG_DISABLE_DEPRECATED \
+-	-DGTK_DISABLE_DEPRECATED 
++	-DG_DISABLE_DEPRECATED
+ 
++##	-DGTK_DISABLE_DEPRECATED
+ ##	-DGNOME_DISABLE_DEPRECATED 
+ 
+ 

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/80_etc_amide.desktop.in.dpatch
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/80_etc_amide.desktop.in.dpatch	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/patches/80_etc_amide.desktop.in.dpatch	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,16 @@
+#! /bin/sh /usr/share/dpatch/dpatch-run
+## 80_etc_amide.desktop.in.dpatch by  <domibel at sid1500>
+##
+## All lines beginning with `## DP:' are a description of the patch.
+## DP: change category
+
+ at DPATCH@
+diff -urNad amide-0.9.1~/etc/amide.desktop.in amide-0.9.1/etc/amide.desktop.in
+--- amide-0.9.1~/etc/amide.desktop.in	2009-02-18 09:53:51.000000000 -0500
++++ amide-0.9.1/etc/amide.desktop.in	2009-02-18 09:54:00.000000000 -0500
+@@ -1,5 +1,4 @@
+ [Desktop Entry]
+-Encoding=UTF-8
+ _GenericName=Medical Image Examiner
+ _Name=Amide
+ _Comment=A Medical Image Data Examiner

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/rules
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/rules	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/rules	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,162 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+# Sample debian/rules that uses debhelper.
+# This file was originally written by Joey Hess and Craig Small.
+# Copyright (c) 2007 Dominique Belhachemi <domibel at cs.tu-berlin.de>
+
+
+
+PACKAGE=amide
+
+# DPatch
+DEB_SOURCE_PACKAGE:=$(PACKAGE)
+include /usr/share/dpatch/dpatch.make
+
+
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+
+# These are used for cross-compiling and for saving the configure script
+# from having to guess our platform (since we know it already)
+DEB_HOST_GNU_TYPE   ?= $(shell dpkg-architecture -qDEB_HOST_GNU_TYPE)
+DEB_BUILD_GNU_TYPE  ?= $(shell dpkg-architecture -qDEB_BUILD_GNU_TYPE)
+
+
+# FOR AUTOCONF 2.52 AND NEWER ONLY
+CONFFLAGS =
+ifeq ($(DEB_BUILD_GNU_TYPE), $(DEB_HOST_GNU_TYPE))
+  CONFFLAGS += --build $(DEB_HOST_GNU_TYPE)
+else
+  CONFFLAGS += --build $(DEB_BUILD_GNU_TYPE) --host $(DEB_HOST_GNU_TYPE)
+endif
+
+CFLAGS:=   -Wall -pipe
+CXXFLAGS:= -Wall -pipe
+ifneq (,$(findstring noopt,$(DEB_BUILD_OPTIONS)))
+        CFLAGS += -O0
+        CXXFLAGS += -O0
+else
+        CFLAGS += -O2
+endif
+
+
+
+configure: configure-stamp
+configure-stamp: patch-stamp 
+	dh_testdir
+
+	chmod +x debian/autogen.sh
+	debian/autogen.sh
+
+	ln -sf /usr/share/misc/config.sub .
+	ln -sf /usr/share/misc/config.guess .
+	rm -f config.cache
+
+	./configure CFLAGS="$(CFLAGS)" CXXFLAGS="$(CXXFLAGS)" \
+		$(CONFFLAGS) \
+		--disable-amide-debug \
+		--config-cache \
+		--disable-dependency-tracking \
+		--enable-rpm-install \
+		--prefix=/usr \
+		--localstatedir=/var/lib/amide \
+		--mandir=\$${prefix}/share/man \
+		--infodir=\$${prefix}/share/info \
+		--localstatedir=/var/lib/amide \
+		LDFLAGS="-Wl,-z,defs"
+
+	touch $@
+
+
+build: build-arch
+
+build-arch: build-arch-stamp
+
+build-arch-stamp: configure
+	dh_testdir
+
+	$(MAKE)
+
+	touch $@
+
+#config.status: patch configure
+#	dh_testdir
+	# Add here commands to configure the package.
+	#aclocal -I macros
+	#libtoolize -f -c
+	#automake -f -a -c
+	#autoconf -f
+#	./configure $(CONFIGURE_FLAGS)
+
+
+
+clean: clean-patched unpatch
+
+clean-patched:
+	dh_testdir
+	dh_testroot
+	rm -f build-stamp configure-stamp
+
+	[ ! -f Makefile ] || $(MAKE) clean
+	[ ! -f Makefile ] || $(MAKE) distclean
+
+
+	find \( -name config.sub -o -name config.guess \) -print0 | xargs -0 -r rm -f \;
+
+
+	# Fix permissions
+	if [ -r debian/executable.files ] ; then \
+		find -type d -print0 | xargs -0 -r chmod 755 ;\
+		find -type f ! -name 'rules' -print0 | xargs -0 -r chmod 644 ;\
+		xargs -t -r chmod +x < debian/executable.files ;\
+	fi
+
+	# Final static cleanups
+	if [ -r debian/deletable.files ] ; then \
+		xargs -t -r rm -f < debian/deletable.files ;\
+	fi
+
+
+	dh_clean 
+
+
+install: build
+	dh_testdir
+	dh_testroot
+	dh_prep
+	dh_installdirs
+
+	# Add here commands to install the package into debian/amide.
+	$(MAKE) DESTDIR=$(CURDIR)/debian/amide install
+	install -d debian/amide/usr/share/pixmaps
+	cp debian/amide_logo_small.xpm debian/amide/usr/share/pixmaps/amide_logo_small.xpm
+	rm -rf debian/amide/var
+
+# Build architecture-independent files here.
+# binary-indep: build install
+# We have nothing to do by default.
+
+# Build architecture-dependent files here.
+binary-arch: install
+	dh_testdir
+	dh_testroot
+	dh_installchangelogs ChangeLog
+	dh_installdocs
+	dh_installexamples
+	dh_scrollkeeper
+	dh_installman
+	dh_link
+	dh_installmenu
+	dh_strip
+	dh_compress
+	dh_fixperms
+	dh_installdeb
+	dh_shlibdeps
+	dh_gencontrol
+	dh_md5sums
+	dh_builddeb
+
+binary: binary-arch
+.PHONY: build clean binary-indep binary-arch binary install 


Property changes on: trunk/packages/amide/tags/amide_0.9.1-5/debian/rules
___________________________________________________________________
Added: svn:executable
   + *

Added: trunk/packages/amide/tags/amide_0.9.1-5/debian/watch
===================================================================
--- trunk/packages/amide/tags/amide_0.9.1-5/debian/watch	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.1-5/debian/watch	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,9 @@
+# Example watch control file for uscan
+# Rename this file to "watch" and then you can run the "uscan" command
+# to check for upstream updates and more.
+# See uscan(1) for format
+
+# Compulsory line, this is a version 3 file
+version=3
+
+http://sf.net/amide/amide-(0.*)\.tgz

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/README.Debian
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/README.Debian	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/README.Debian	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,6 @@
+amide for Debian
+----------------
+
+This package comes without libfame support because of the non-free license.
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 16 Dec 2007 21:32:15 +0200

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/README.source
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/README.source	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/README.source	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,3 @@
+Please read 
+/usr/share/doc/quilt/README.source
+for more information.

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/amide.doc-base
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/amide.doc-base	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/amide.doc-base	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,11 @@
+Document: amide
+Title: Debian amide Manual
+Author: Andy Loening
+Abstract: This manual describes what amide is
+ and how it can be used to
+ analyze medical imaging data sets.
+Section: Science/Medicine
+
+Format: HTML
+Index: /usr/share/gtk-doc/html/amitk/index.html
+Files: /usr/share/gtk-doc/html/amitk/*.html

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/amide.menu
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/amide.menu	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/amide.menu	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,3 @@
+?package(amide):command="/usr/bin/amide" icon="/usr/share/pixmaps/amide_logo_small.xpm" needs="X11" \
+        section="Applications/Science/Medicine" title="AMIDE"
+

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/amide_logo_small.xpm
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/amide_logo_small.xpm	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/amide_logo_small.xpm	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,367 @@
+/* XPM */
+static char * amide_logo_small_xpm[] = {
+"32 32 332 2",
+"  	c None",
+". 	c #3230B9",
+"+ 	c #2F2DA9",
+"@ 	c #2F2DA4",
+"# 	c #2F2DA3",
+"$ 	c #302E9A",
+"% 	c #323067",
+"& 	c #343396",
+"* 	c #2F2D8C",
+"= 	c #2F2D84",
+"- 	c #2F2D87",
+"; 	c #2F2D8A",
+"> 	c #2F2D8D",
+", 	c #2F2D8E",
+"' 	c #2F2D89",
+") 	c #2F2D85",
+"! 	c #2F2D82",
+"~ 	c #2E2D61",
+"{ 	c #33317E",
+"] 	c #2F2D93",
+"^ 	c #2F2D98",
+"/ 	c #2F2D9B",
+"( 	c #2F2D9C",
+"_ 	c #2F2D9A",
+": 	c #2F2D96",
+"< 	c #2F2D91",
+"[ 	c #2F2D83",
+"} 	c #2F2D81",
+"| 	c #2F2D73",
+"1 	c #1B1A25",
+"2 	c #2F2D4D",
+"3 	c #2E2C69",
+"4 	c #2F2D8B",
+"5 	c #2F2D97",
+"6 	c #2F2DA7",
+"7 	c #2F2DAA",
+"8 	c #2F2DA8",
+"9 	c #2F2DA2",
+"0 	c #2F2D94",
+"a 	c #2F2D7E",
+"b 	c #272644",
+"c 	c #0F0F11",
+"d 	c #0C0C12",
+"e 	c #0D0C14",
+"f 	c #201F41",
+"g 	c #2F2DB2",
+"h 	c #2F2DB8",
+"i 	c #2F2DB4",
+"j 	c #2B2962",
+"k 	c #302D95",
+"l 	c #302D8A",
+"m 	c #312D81",
+"n 	c #302C63",
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+"m@	c #0B0B0B",
+"n@	c #0B0A0B",
+"o@	c #030303",
+"p@	c #080808",
+"q@	c #020203",
+"                                                                ",
+"                                                                ",
+"                                                                ",
+"              . + @ @ @ @ @ @ # # # $ %                         ",
+"            & * = - ; > , * ' ) ! ! ! ~                         ",
+"            { - > ] ^ / ( _ : < ' [ } | 1                       ",
+"            2 3 } 4 5 6 7 8 9 / 0 4 [ a b                       ",
+"              c d e f g h i _ j : k l m n o                     ",
+"                    p q r s t c u v w x y z                     ",
+"                    A B C D E F G H I J K L                     ",
+"                    M N O P Q R S T U V W X Y                   ",
+"                  Z `  ...+. at .    #.$.%.&.*.=.                  ",
+"                  -.;.>.,.'.F     ).!.~.{.].^.                  ",
+"                  /.(._.:.<.R       [.}.|.1.2.3.                ",
+"                4.5.6.7.8.9.        0.a.b.b.c.d.                ",
+"                e.f.g.h.i.F         j.k.l.m.n.o.p.              ",
+"                q.r.s.t.u.R           v.n.w.w.x.y.              ",
+"              z.A.B.C.D.E.F.G.H.I.J.K.L.M.N.N.O.P.              ",
+"              Q.R.S.T.U.V.W.X.Y.Z.`. +.+++++ at +#+$+%+            ",
+"            &+*+k.=+-+;+>+,+'+)+N.++++ at +!+!+~+{+]+^+            ",
+"            /+(+n._+:+<+<+[+}+|+|+1+2+2+3+4+5+6+7+8+            ",
+"            9+0+a+b+c+d+e+e+e+e+e+e+e+f+g+h+i+j+k+l+m+          ",
+"          n+o+N.p+q+ at .R R R R R R R R R r+s+t+u+u+v+w+          ",
+"          x+y+ at +z+A+F                     B+C+C+D+E+F+          ",
+"        G+H+I+~+J+K+L+M+                N+O+P+Q+R+R+S+T+U+      ",
+"    V+W+X+Y+Z+5+6+`+ @. at +@          @@#@$@%@R+&@*@=@-@;@>@,@    ",
+"    '@)@5+6+i+i+j+j+t+u+!@m+        R+~@&@*@=@-@;@>@{@]@]@^@    ",
+"    /@7+(@k+k+_@:@:@<@[@}@|@        1@=@-@;@>@{@]@]@]@]@2 at 3@4@  ",
+"    5 at 6@7 at 8@9 at 9@9 at 0@a at b@c at F         d at e@f at g@g at g@g at g@h at i@j at k@R   ",
+"        l at m@n at n@n at n@l at o@F R             l at m@n at n@n at n@n at p@q at F     ",
+"                                                                ",
+"                                                                "};

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/autogen.sh
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/autogen.sh	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/autogen.sh	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,72 @@
+#!/bin/sh
+#
+#
+#
+# Requires: automake 1.9, autoconf 2.57+
+# Conflicts: autoconf 2.13
+set -e
+
+# Refresh GNU autotools toolchain.
+echo Cleaning autotools files...
+find -type d -name autom4te.cache -print0 | xargs -0 rm -rf \;
+find -type f \( -name missing -o -name install-sh -o -name mkinstalldirs \
+	-o -name depcomp -o -name ltmain.sh -o -name configure \
+	-o -name config.sub -o -name config.guess \
+	-o -name Makefile.in \) -print0 | xargs -0 rm -f
+
+echo Running autoreconf...
+#autoreconf --force --install
+
+
+   # Add here commands to configure the package.
+   intltoolize --copy --force --automake
+   aclocal -I m4
+   libtoolize -f -c
+   automake -f -a -c
+   autoconf -f
+ #  rm -rf autom4te.cache
+
+
+# For the Debian package build
+test -d debian && {
+	# link these in Debian builds
+	rm -f config.sub config.guess
+	ln -s /usr/share/misc/config.sub .
+	ln -s /usr/share/misc/config.guess .
+
+	# refresh list of executable scripts, to avoid possible breakage if
+	# upstream tarball does not include the file or if it is mispackaged
+	# for whatever reason.
+	[ "$1" == "updateexec" ] && {
+		echo Generating list of executable files...
+		rm -f debian/executable.files
+		find -type f -perm +111 ! -name '.*' -fprint debian/executable.files
+	}
+
+	# Remove any files in upstream tarball that we don't have in the Debian
+	# package (because diff cannot remove files)
+	version=`dpkg-parsechangelog | awk '/Version:/ { print $2 }' | sed -e 's/-[^-]\+$//'`
+	source=`dpkg-parsechangelog | awk '/Source:/ { print $2 }' | tr -d ' '`
+	if test -r ../${source}_${version}.orig.tar.gz ; then
+		echo Generating list of files that should be removed...
+		rm -f debian/deletable.files
+		touch debian/deletable.files
+		[ -e debian/tmp ] && rm -rf debian/tmp
+		mkdir debian/tmp
+		( cd debian/tmp ; tar -zxf ../../../${source}_${version}.orig.tar.gz )
+		find debian/tmp/ -type f ! -name '.*' -print0 | xargs -0 -ri echo '{}' | \
+		  while read -r i ; do
+			if test -e "${i}" ; then
+				filename=$(echo "${i}" | sed -e 's#.*debian/tmp/[^/]\+/##')
+				test -e "${filename}" || echo "${filename}" >>debian/deletable.files
+			fi
+		  done
+		rm -fr debian/tmp
+	else
+		echo Emptying list of files that should be deleted...
+		rm -f debian/deletable.files
+		touch debian/deletable.files
+	fi
+}
+
+exit 0

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/changelog
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/changelog	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/changelog	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,99 @@
+amide (0.9.2-1) unstable; urgency=low
+
+  * New upstream release
+  * put amide under Debian Med team maintenance
+  * changed patch system: using quilt instead of dpatch
+  * added dependency: libavcodec-dev for fly through video generation
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 20 Dec 2009 13:38:23 -0500
+
+amide (0.9.1-5) unstable; urgency=low
+
+  * debian/control: removed build dependency to libglib1.2-dev
+                    and libglib1.2-dev (Closes: #523561)
+  * debian/control: Standards-Version: 3.8.1
+  * debian/changelog: updated references to GPL-2 and LGPL-2
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 12 Apr 2009 13:01:46 -0400
+
+amide (0.9.1-4) unstable; urgency=low
+
+   * debian/compat: bumped up to 7
+   * debian/rules: uses "dh_prep" now instead of "dh_clean -k"
+   * desktop category is now: Categories=Graphics;MedicalSoftware;
+   * Add var/lib/scrollkeeper to debian/dirs to so that scrollkeeper-update
+     can use it when run by the build system.
+   * debugging symbols disabled
+   * debian/copyright: is now machine-interpretable
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Wed, 19 Feb 2009 09:21:05 -0500
+
+amide (0.9.1-3) unstable; urgency=low
+
+  * fixed lintian warning: doc-base-uses-applications-section
+  * debian/control: Standards-Version: 3.8.0
+  * debian/control: DM-Upload-Allowed: yes
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Fri, 14 Nov 2008 17:10:08 +0100
+
+amide (0.9.1-2) unstable; urgency=low
+
+   * debian/control: removed builddep libniftiio1-dev (Closes: #460358)
+   * fixed implicit pointer conversion (Closes: #457987)
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 13 Jan 2008 10:53:11 +0200
+
+
+amide (0.9.1-1) unstable; urgency=low
+
+   * New upstream release
+   * debian-policy 3.7.3 ready
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Thu, 20 Dec 2007 22:33:35 +0200
+
+
+amide (0.8.22-2) unstable; urgency=low
+
+  * debian/control: libvolpack1-dev added
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 16 Dec 2007 23:13:12 +0200
+
+
+amide (0.8.22-1) unstable; urgency=low
+
+   * New upstream release
+   * make use of autoconf in debian/rules file
+   * small bug-fixes
+   * Back to menu-1 format
+   * all changes can be found in debian/patches folder
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sat, 23 Nov 2007 19:13:12 +0200
+
+
+amide (0.8.21-4) unstable; urgency=low
+
+  * debian/control: libniftiio1-dev dependency is updated
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Mon, 16 Sep 2007 22:10:46 +0200
+
+
+amide (0.8.21-3) unstable; urgency=low
+
+  * debian/copyright : Add documentation license (GFDL) without optional features.
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sat, 28 Jul 2007 02:54:46 +0200
+
+
+amide (0.8.21-2) unstable; urgency=low
+
+  * Add missing libglib1.2-dev dependency.
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Wed, 18 Jul 2007 01:42:45 +0200
+
+
+amide (0.8.21-1) unstable; urgency=low
+
+  * Initial release (Closes: #409913)
+
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de>  Sun, 15 Jul 2007 21:32:15 +0200
+

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/compat
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/compat	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/compat	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1 @@
+7

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/control
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/control	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/control	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,26 @@
+Source: amide
+Section: graphics
+Priority: optional
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Dominique Belhachemi <domibel at cs.tu-berlin.de>
+DM-Upload-Allowed: yes
+Build-Depends: gnome-doc-utils, gtk-doc-tools, libtool, automake, intltool,
+ quilt, debhelper (>= 7), autotools-dev, scrollkeeper, libxml-parser-perl, m4,
+ pkg-config, libgtk2.0-dev, libxml2-dev, libgnomecanvas2-dev,
+ libgnomeui-dev, libgsl0-dev, libmdc2-dev, libdcmtk1-dev, libvolpack1-dev,
+ libavcodec-dev
+Standards-Version: 3.8.3
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/amide/trunk/?rev=0&sc=0
+Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/amide/trunk/
+Homepage: http://amide.sourceforge.net/
+
+Package: amide
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: software for Medical Imaging
+ AMIDE: (Amide's a Medical Imaging Data Examiner)
+ AMIDE is a tool for viewing and analyzing medical image data sets.
+ It's capabilities include the simultaneous handling of multiple data
+ sets imported from a variety of file formats, image fusion, 3D region
+ of interest drawing and analysis, volume rendering, and rigid body
+ alignments.

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/copyright
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/copyright	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/copyright	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,81 @@
+Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat
+Debianized-By: Dominique Belhachemi <domibel at cs.tu-berlin.de>
+Debianized-Date: Fri, 20 Apr 2007 21:32:15 +0200
+Original-Source: http://amide.sourceforge.net/
+
+
+Files: debian/*
+Copyright: 2008, Dominique Belhachemi <domibel at cs.tu-berlin.de>
+License: GPL-2+
+ The Debian packaging is licensed under the GPL-2 or any later version,
+ see `/usr/share/common-licenses/GPL-2'
+
+
+Files: *
+Copyright:
+ Copyright (©) 2007 by Andy Loening <loening at alum.mit.edu>
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this package; if not, write to the Free Software
+ Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+ .
+ On Debian systems, the complete text of the GNU General Public 
+ License, version 2 can be found in `/usr/share/common-licenses/GPL-2'.
+
+
+Files:
+ ./src/amitk_xif_sel.h
+ ./src/amitk_xif_sel.c
+ ./src/amitk_dial.h
+ ./src/amitk_dial.c
+Copyright:
+ Copyright (©) 2007 by Andy Loening <loening at alum.mit.edu>
+License: LGPL-2+
+ This library is free software; you can redistribute it and/or
+ modify it under the terms of the GNU Lesser General Public
+ License as published by the Free Software Foundation; either
+ version 2 of the License, or (at your option) any later version.
+ .
+ This library is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+ Lesser General Public License for more details.
+ .
+ You should have received a copy of the GNU Lesser General Public
+ License along with this library; if not, write to the
+ Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston,
+ MA 02110-1301, USA.
+ .
+ On Debian systems, the complete text of the GNU Lesser General Public
+ License, version 2.0 can be found in `/usr/share/common-licenses/LGPL-2'.
+
+
+Files:
+ Documentation
+Copyright:
+ Copyright (©) 2007 by Andy Loening <loening at alum.mit.edu>
+License: GFDL-1.1
+ Permission is granted to copy, distribute and/or modify
+ this document under the terms of the GNU Free
+ Documentation License, Version 1.1 or any later
+ version published by the Free Software Foundation with no
+ Invariant Sections, no Front-Cover Texts, and no Back-Cover
+ Texts. You may obtain a copy of the GNU Free
+ Documentation License from the Free Software
+ Foundation by visiting their Web site (http://www.fsf.org) or by
+ writing to: 
+ Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston,
+ MA 02110-1301, USA.
+ .
+ On Debian systems, the complete text of the GNU Free Documentation License
+ can be found in `/usr/share/common-licenses/GFDL`

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/deletable.files
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/deletable.files	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/deletable.files	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,77 @@
+mkinstalldirs
+pixmaps/icons.fig.bak
+pixmaps/compartmental_models.fig.bak
+doc/reference/tmpl/amitk_line_profile.sgml.bak
+doc/reference/tmpl/amide_gnome.sgml.bak
+doc/reference/tmpl/amitk_canvas.sgml.bak
+doc/reference/tmpl/amitk_threshold.sgml.bak
+doc/reference/tmpl/amitk_data_set_USHORT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_DOUBLE_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SSHORT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SBYTE_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_tree_view.sgml.bak
+doc/reference/tmpl/amitk_data_set_DOUBLE_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_progress_dialog.sgml.bak
+doc/reference/tmpl/tb_math.sgml.bak
+doc/reference/tmpl/amitk_raw_data.sgml.bak
+doc/reference/tmpl/amitk_raw_data_USHORT.sgml.bak
+doc/reference/tmpl/amitk_raw_data_FLOAT.sgml.bak
+doc/reference/tmpl/amitk_data_set_UBYTE_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SBYTE_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_filter.sgml.bak
+doc/reference/tmpl/amitk_data_set_USHORT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_point.sgml.bak
+doc/reference/tmpl/amitk-unused.sgml.bak
+doc/reference/tmpl/amitk_raw_data_SSHORT.sgml.bak
+doc/reference/tmpl/amitk_data_set_UINT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_variable_type.sgml.bak
+doc/reference/tmpl/amitk_data_set_SSHORT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_preferences.sgml.bak
+doc/reference/tmpl/amitk_data_set_variable_type.sgml.bak
+doc/reference/tmpl/amitk_data_set_SINT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_fiducial_mark.sgml.bak
+doc/reference/tmpl/amitk_data_set_SINT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_BOX.sgml.bak
+doc/reference/tmpl/amitk_common.sgml.bak
+doc/reference/tmpl/amitk_data_set_UBYTE_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_CYLINDER.sgml.bak
+doc/reference/tmpl/amitk_object_dialog.sgml.bak
+doc/reference/tmpl/amitk_raw_data_variable_type.sgml.bak
+doc/reference/tmpl/amitk_data_set_UINT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_ISOCONTOUR_3D.sgml.bak
+doc/reference/tmpl/amitk_data_set_FLOAT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_color_table.sgml.bak
+doc/reference/tmpl/amitk_roi_FREEHAND_3D.sgml.bak
+doc/reference/tmpl/amitk_data_set.sgml.bak
+doc/reference/tmpl/amitk_data_set_SSHORT_0D_SCALING.sgml.bak
+doc/reference/tmpl/tb_export_data_set.sgml.bak
+doc/reference/tmpl/amitk_study.sgml.bak
+doc/reference/tmpl/stamp-amitk_type_builtins.sgml.bak
+doc/reference/tmpl/amitk_data_set_FLOAT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_canvas_object.sgml.bak
+doc/reference/tmpl/amitk_type.sgml.bak
+doc/reference/tmpl/amitk_data_set_FLOAT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_raw_data_DOUBLE.sgml.bak
+doc/reference/tmpl/amitk_space_edit.sgml.bak
+doc/reference/tmpl/amitk_raw_data_UINT.sgml.bak
+doc/reference/tmpl/amide.sgml.bak
+doc/reference/tmpl/amitk_roi_ELLIPSOID.sgml.bak
+doc/reference/tmpl/amitk_raw_data_UBYTE.sgml.bak
+doc/reference/tmpl/amitk_type_builtins.sgml.bak
+doc/reference/tmpl/amitk_data_set_UBYTE_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_color_table_menu.sgml.bak
+doc/reference/tmpl/amitk_space.sgml.bak
+doc/reference/tmpl/amitk_marshal.sgml.bak
+doc/reference/tmpl/amitk_roi_FREEHAND_2D.sgml.bak
+doc/reference/tmpl/amitk_data_set_USHORT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_raw_data_SINT.sgml.bak
+doc/reference/tmpl/amitk_roi.sgml.bak
+doc/reference/tmpl/amitk_raw_data_SBYTE.sgml.bak
+doc/reference/tmpl/amitk_data_set_SINT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SBYTE_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_object.sgml.bak
+doc/reference/tmpl/amitk_window_edit.sgml.bak
+doc/reference/tmpl/amitk_data_set_DOUBLE_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_ISOCONTOUR_2D.sgml.bak
+doc/reference/tmpl/amitk_volume.sgml.bak
+doc/reference/tmpl/amitk_data_set_UINT_2D_SCALING.sgml.bak

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/dirs
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/dirs	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/dirs	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,2 @@
+usr/bin
+var/lib/scrollkeeper

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/docs
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/docs	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/docs	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,2 @@
+todo
+

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/get-orig-source
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/get-orig-source	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/get-orig-source	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,4 @@
+PACKAGE=amide
+
+wget -c http://downloads.sourceforge.net/project/amide/amide/0.9.2/amide-0.9.2.tgz?use_mirror=cdnetworks-us-2
+cp amide-0.9.2.tgz amide_0.9.2.orig.tar.gz

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/patches/10_all.diff
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/patches/10_all.diff	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/patches/10_all.diff	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,197 @@
+Index: amide-0.9.2/etc/amide.desktop.in
+===================================================================
+--- amide-0.9.2.orig/etc/amide.desktop.in	2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/etc/amide.desktop.in	2009-12-20 15:33:46.000000000 -0500
+@@ -1,5 +1,4 @@
+ [Desktop Entry]
+-Encoding=UTF-8
+ _GenericName=Medical Image Examiner
+ _Name=Amide
+ _Comment=A Medical Image Data Examiner
+Index: amide-0.9.2/src/mpeg_encode.c
+===================================================================
+--- amide-0.9.2.orig/src/mpeg_encode.c	2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/src/mpeg_encode.c	2009-12-20 15:33:46.000000000 -0500
+@@ -141,7 +141,7 @@
+ /* -------------------------------------------------------- */
+ #ifdef AMIDE_FFMPEG_SUPPORT
+ 
+-#include <ffmpeg/libavcodec/avcodec.h>
++#include <libavcodec/avcodec.h>
+ 
+ 
+ typedef struct {
+Index: amide-0.9.2/src/ui_common.c
+===================================================================
+--- amide-0.9.2.orig/src/ui_common.c	2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/src/ui_common.c	2009-12-20 15:33:46.000000000 -0500
+@@ -46,7 +46,7 @@
+ #include <medcon.h>
+ #endif
+ #ifdef AMIDE_FFMPEG_SUPPORT
+-#include <ffmpeg/libavcodec/avcodec.h>
++#include <libavcodec/avcodec.h>
+ #endif
+ #ifdef AMIDE_LIBFAME_SUPPORT
+ #include <fame_version.h>
+Index: amide-0.9.2/Makefile.am
+===================================================================
+--- amide-0.9.2.orig/Makefile.am	2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/Makefile.am	2009-12-20 15:33:46.000000000 -0500
+@@ -1,5 +1,4 @@
+ ACLOCAL_AMFLAGS = \
+-	-I /usr/local/share/aclocal \
+ 	-I m4
+ 
+ if DISABLE_DOC
+Index: amide-0.9.2/src/Makefile.am
+===================================================================
+--- amide-0.9.2.orig/src/Makefile.am	2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/src/Makefile.am	2009-12-20 15:35:20.000000000 -0500
+@@ -23,13 +23,11 @@
+ 	$(GSL_CFLAGS) \
+ 	$(LIBFAME_CFLAGS) \
+ 	$(AMIDE_GTK_CFLAGS) \
+-	$(AMIDE_DEBUG_CFLAGS) \
+ 	$(AMIDE_CHECK_OBSOLETE_CFLAGS) \
+ 	$(AMIDE_LIBDCMDATA_CFLAGS) \
+-	-I/usr/local/include \
+ 	$(XMEDCON_CFLAGS) \
+-	$(FFMPEG_CFLAGS) 
+-
++	$(LIBAVCODEC_CFLAGS) \
++	-DG_DISABLE_DEPRECATED
+ 
+ 
+ ## c++ gets the same includes
+@@ -41,12 +39,11 @@
+ # to be behind the DCMTK stuff
+ amide_LDADD = \
+ 	$(GSL_LIBS) \
+-	$(LIBFAME_LIBS) \
+ 	$(AMIDE_LIBECAT_LIBS) \
+ 	$(AMIDE_LIBVOLPACK_LIBS) \
+ 	$(AMIDE_GTK_LIBS) \
+ 	$(XMEDCON_LIBS) \
+-	$(FFMPEG_LIBS) \
++	$(LIBAVCODEC_LIBS) \
+ 	$(AMIDE_LIBDCMDATA_LIBS) \
+ 	$(AMIDE_LDADD_WIN32) 
+ 
+Index: amide-0.9.2/configure.in
+===================================================================
+--- amide-0.9.2.orig/configure.in	2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/configure.in	2009-12-20 15:35:30.000000000 -0500
+@@ -43,10 +43,10 @@
+ dnl also, need the -headerpad_max_install_name to allow switching
+ dnl the library paths with strings that have longer lengths
+ case "$host_os" in
+-darwin*) 	CFLAGS="-g -O2 -Wall"
++darwin*) 	CFLAGS="-O2 -Wall"
+ 		LDFLAGS="-headerpad_max_install_names";;
+-*)		CFLAGS="-g -O6 -Wall"
+-		CXXFLAGS="-g -O6 -Wall";;
++*)		CFLAGS="-O6 -Wall"
++		CXXFLAGS="-O6 -Wall";;
+ esac
+ 
+ if test $CC = "gcc"; then
+@@ -63,7 +63,7 @@
+ 	read continue_with_bad_gcc
+ 	if test $continue_with_bad_gcc = "y"; then
+ 		echo "removing optimizations to reduce potential of compiler error"
+-		CFLAGS="-g -O0"
++		CFLAGS="-O0"
+ 	else
+ 		exit 1
+ 	fi
+@@ -86,14 +86,14 @@
+ 
+ dnl check for various libraries and programs that we might need
+ AM_PATH_GSL(1.1.1, FOUND_LIBGSL=yes, FOUND_LIBGSL=no)
+-AC_CHECK_LIB(ecat, matrix_open, FOUND_LIBECAT=yes, FOUND_LIBECAT=no, -L/sw/lib)
+-AC_CHECK_LIB(volpack, vpGetErrorString, FOUND_VOLPACK=yes, FOUND_VOLPACK=no, -lm -L/sw/lib -L/usr/local/lib)
++AC_CHECK_LIB(ecat, matrix_open, FOUND_LIBECAT=yes, FOUND_LIBECAT=no)
++AC_CHECK_LIB(volpack, vpGetErrorString, FOUND_VOLPACK=yes, FOUND_VOLPACK=no, -lm)
+ AM_PATH_XMEDCON(0.10.0, FOUND_XMEDCON=yes, FOUND_XMEDCON=no)
+ 
+ dnl switch to C++ for DCMTK library stuff - also, if pthread is on the platform, probably need that
+ AC_LANG_CPLUSPLUS
+ AC_CHECK_LIB(pthread, pthread_mutex_init, THREAD_LIBS="-lpthread", THREAD_LIBS="")
+-AC_CHECK_LIB(dcmdata, main, FOUND_DCMDATA=yes, FOUND_DCMDATA=no, -lofstd  -lz -L/usr/local/dicom/lib -L/sw/lib $THREAD_LIBS)
++AC_CHECK_LIB(dcmdata, main, FOUND_DCMDATA=yes, FOUND_DCMDATA=no, -lofstd  -lz $THREAD_LIBS)
+ 
+ dnl trying to phase out libfame use in favor of ffmpeg
+ PKG_CHECK_MODULES(FFMPEG, libavcodec >= 51.45.0, FOUND_FFMPEG=yes, FOUND_FFMPEG=no);
+@@ -193,7 +193,7 @@
+ 	AC_DEFINE(AMIDE_LIBMDC_SUPPORT, 1, Define to compile with (X)MedCon)
+ 
+ 	dnl 2007.10.28 - new xmedcon's should be using glib2/gtk2, dont' have to overwrite XMEDCON_LIBS
+-	dnl XMEDCON_LIBS="-L/usr/local/lib -L/usr/local/xmedcon/lib -lmdc"
++	dnl XMEDCON_LIBS="-lmdc"
+ 	AC_SUBST(XMEDCON_LIBS)
+ else
+ 	echo "Compiling without xmedcon/libmdc file support"
+@@ -224,29 +224,27 @@
+ 	enable_ffmpeg="$enableval", 
+ 	enable_ffmpeg=yes)
+ 
++	PKG_CHECK_MODULES(LIBAVCODEC, libavcodec)
++#	PKG_CHECK_MODULES(LIBAVFORMAT, libavformat)
++#	PKG_CHECK_MODULES(LIBSWSCALE, libswscale)
++#	PKG_CHECK_MODULES(LIBAVUTIL, libavutil)
++
++        AC_SUBST(LIBAVCODEC_LIBS)
++        AC_SUBST(LIBAVCODEC_CFLAGS)
++#	AC_SUBST(LIBAVFORMAT_LIBS)
++#	AC_SUBST(LIBAVFORMAT_CFLAGS)
++#	AC_SUBST(LIBSWSCALE_LIBS)
++#	AC_SUBST(LIBSWSCALE_CFLAGS)
++#	AC_SUBST(LIBAVUTIL_LIBS)
++#	AC_SUBST(LIBAVUTIL_CFLAGS)
++
+ if (test $enable_ffmpeg = yes) && (test $FOUND_FFMPEG = yes); then
+ 	echo "Compiling with ffmpeg (libavcodec) mpeg encoding support "
+ 	AC_DEFINE(AMIDE_FFMPEG_SUPPORT, 1, Define to compile with ffmpeg)
+ 	AC_SUBST(FFMPEG_LIBS)
+ 	AC_SUBST(FFMPEG_CFLAGS)
+ else
+-	echo "Compiling without ffmpeg (libavcodec) mpeg encoding support"
+-
+-	dnl Let people compile with libfame mpeg movie generation if not using ffmpeg
+-	AM_PATH_LIBFAME(0.9.1, FOUND_LIBFAME=yes, FOUND_LIBFAME=no)
+-	dnl AC_CHECK_LIB(libfame, fame_init, FOUND_LIBFAME=yes, FOUND_LIBFAME=no)
+-	AC_ARG_ENABLE(
+-		libfame,
+-			[  --enable-libfame   	  Compile in libfame mpeg encoding support if not using ffmpeg [default=no]], 
+-			enable_libfame="$enableval", 		 
+-			enable_libfame=no)	
+-
+-	if (test $enable_libfame = yes) && (test $FOUND_LIBFAME = yes); then
+-		echo "Compiling with libfame mpeg encoding support "
+-		AC_DEFINE(AMIDE_LIBFAME_SUPPORT, 1, Define to compile with Libfame)
+-	else
+-		echo "Compiling without libfame mpeg encoding support"
+-	fi
++	echo "Compiling without ffmpeg support"
+ fi
+ 
+ dnl Let people compile without the DCMTK library
+@@ -258,8 +256,8 @@
+ 
+ if (test $enable_libdcmdata = yes) && (test $FOUND_DCMDATA = yes); then
+ 	echo "Compiling with DCMTK support for DICOM files"
+-	AMIDE_LIBDCMDATA_LIBS="-L/usr/local/dicom/lib -ldcmdata -lofstd -lz $THREAD_LIBS"
+-	AMIDE_LIBDCMDATA_CFLAGS="-I/usr/local/dicom/include/dcmtk/dcmdata -I/usr/local/dicom/include/dcmtk/ofstd -I/usr/local/dicom/include -I/usr/include/dcmtk/dcmdata -I/usr/local/include/dcmtk/ofstd -I/sw/include/dcmtk/dcmdata -I/sw/include/dcmtk/ofstd -I/sw/include/dcmtk"
++	AMIDE_LIBDCMDATA_LIBS="-ldcmdata -lofstd -lz $THREAD_LIBS"
++	AMIDE_LIBDCMDATA_CFLAGS="-I/usr/include/dcmtk/dcmdata"
+ 	AC_SUBST(AMIDE_LIBDCMDATA_LIBS)
+ 	AC_SUBST(AMIDE_LIBDCMDATA_CFLAGS)
+ 	AC_DEFINE(AMIDE_LIBDCMDATA_SUPPORT, 1, Define to compile with DCMTK)
+@@ -391,6 +389,3 @@
+ dnl help/C/Makefile
+ dnl help/es/Makefile
+ 
+-dnl Move the spec file so it won't get eaten by make distclean
+-echo "Moving SPEC file to base directory"
+-mv etc/amide.spec ./

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/patches/series
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/patches/series	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/patches/series	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1 @@
+10_all.diff

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/rules
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/rules	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/rules	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,151 @@
+#!/usr/bin/make -f
+
+PACKAGE=amide
+
+# quilt
+DEB_SOURCE_PACKAGE:=$(PACKAGE)
+include /usr/share/quilt/quilt.make
+
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+
+# These are used for cross-compiling and for saving the configure script
+# from having to guess our platform (since we know it already)
+DEB_HOST_GNU_TYPE   ?= $(shell dpkg-architecture -qDEB_HOST_GNU_TYPE)
+DEB_BUILD_GNU_TYPE  ?= $(shell dpkg-architecture -qDEB_BUILD_GNU_TYPE)
+
+
+# FOR AUTOCONF 2.52 AND NEWER ONLY
+CONFFLAGS =
+ifeq ($(DEB_BUILD_GNU_TYPE), $(DEB_HOST_GNU_TYPE))
+  CONFFLAGS += --build $(DEB_HOST_GNU_TYPE)
+else
+  CONFFLAGS += --build $(DEB_BUILD_GNU_TYPE) --host $(DEB_HOST_GNU_TYPE)
+endif
+
+CFLAGS:=   -Wall -pipe
+CXXFLAGS:= -Wall -pipe
+ifneq (,$(findstring noopt,$(DEB_BUILD_OPTIONS)))
+        CFLAGS += -O0
+        CXXFLAGS += -O0
+else
+        CFLAGS += -O2
+endif
+
+get-orig-source:
+	/bin/sh $(CURDIR)/debian/get-orig-source
+
+configure: configure-stamp
+configure-stamp: $(QUILT_STAMPFN)
+	dh_testdir
+
+	chmod +x debian/autogen.sh
+	debian/autogen.sh
+
+	ln -sf /usr/share/misc/config.sub .
+	ln -sf /usr/share/misc/config.guess .
+	rm -f config.cache
+
+	./configure CFLAGS="$(CFLAGS)" CXXFLAGS="$(CXXFLAGS)" \
+		$(CONFFLAGS) \
+		--disable-amide-debug \
+		--config-cache \
+		--disable-dependency-tracking \
+		--enable-rpm-install \
+		--prefix=/usr \
+		--localstatedir=/var/lib/amide \
+		--mandir=\$${prefix}/share/man \
+		--infodir=\$${prefix}/share/info \
+		--localstatedir=/var/lib/amide \
+		LDFLAGS="-Wl,-z,defs"
+
+	touch $@
+
+
+build: build-arch
+
+build-arch: build-arch-stamp
+
+build-arch-stamp: configure
+	dh_testdir
+
+	$(MAKE)
+
+	touch $@
+
+#config.status: patch configure
+#	dh_testdir
+	# Add here commands to configure the package.
+	#aclocal -I macros
+	#libtoolize -f -c
+	#automake -f -a -c
+	#autoconf -f
+#	./configure $(CONFIGURE_FLAGS)
+
+
+
+clean: clean-patched unpatch
+
+clean-patched:
+	dh_testdir
+	dh_testroot
+	rm -f build-stamp configure-stamp
+
+	[ ! -f Makefile ] || $(MAKE) clean
+	[ ! -f Makefile ] || $(MAKE) distclean
+
+
+	find \( -name config.sub -o -name config.guess \) -print0 | xargs -0 -r rm -f \;
+
+
+	# Fix permissions
+	if [ -r debian/executable.files ] ; then \
+		find -type d -print0 | xargs -0 -r chmod 755 ;\
+		find -type f ! -name 'rules' -print0 | xargs -0 -r chmod 644 ;\
+		xargs -t -r chmod +x < debian/executable.files ;\
+	fi
+
+	# Final static cleanups
+	if [ -r debian/deletable.files ] ; then \
+		xargs -t -r rm -f < debian/deletable.files ;\
+	fi
+
+
+	dh_clean 
+
+
+install: build
+	dh_testdir
+	dh_testroot
+	dh_prep
+	dh_installdirs
+
+	# Add here commands to install the package into debian/amide.
+	$(MAKE) DESTDIR=$(CURDIR)/debian/amide install
+	install -d debian/amide/usr/share/pixmaps
+	cp debian/amide_logo_small.xpm debian/amide/usr/share/pixmaps/amide_logo_small.xpm
+	rm -rf debian/amide/var
+
+# Build architecture-dependent files here.
+binary-arch: install
+	dh_testdir
+	dh_testroot
+	dh_installchangelogs ChangeLog
+	dh_installdocs
+	dh_installexamples
+	dh_installman
+	dh_link
+	dh_installmenu
+	dh_strip
+	dh_compress
+	dh_fixperms
+	dh_installdeb
+	dh_shlibdeps
+	dh_gencontrol
+	dh_md5sums
+	dh_builddeb
+
+binary: binary-arch
+.PHONY: build clean binary-indep binary-arch binary install 


Property changes on: trunk/packages/amide/tags/amide_0.9.2-1/debian/rules
___________________________________________________________________
Added: svn:executable
   + *

Added: trunk/packages/amide/tags/amide_0.9.2-1/debian/watch
===================================================================
--- trunk/packages/amide/tags/amide_0.9.2-1/debian/watch	                        (rev 0)
+++ trunk/packages/amide/tags/amide_0.9.2-1/debian/watch	2009-12-20 21:27:33 UTC (rev 4470)
@@ -0,0 +1,9 @@
+# Example watch control file for uscan
+# Rename this file to "watch" and then you can run the "uscan" command
+# to check for upstream updates and more.
+# See uscan(1) for format
+
+# Compulsory line, this is a version 3 file
+version=3
+
+http://sf.net/amide/amide-(0.*)\.tgz




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