[med-svn] r3363 - in trunk/packages/plink/trunk/debian: . patches

[Andreas Tille]

Author: tille
Date: 2009-05-04 08:52:29 +0000 (Mon, 04 May 2009)
New Revision: 3363

Added:
   trunk/packages/plink/trunk/debian/patches/
   trunk/packages/plink/trunk/debian/patches/20_plink-1.06-gcc4.4.patch
   trunk/packages/plink/trunk/debian/patches/series
Modified:
   trunk/packages/plink/trunk/debian/changelog
   trunk/packages/plink/trunk/debian/control
   trunk/packages/plink/trunk/debian/rules
Log:
Patch to build using gcc 4.4; example data files not executable


Modified: trunk/packages/plink/trunk/debian/changelog
===================================================================
--- trunk/packages/plink/trunk/debian/changelog	2009-05-03 20:48:31 UTC (rev 3362)
+++ trunk/packages/plink/trunk/debian/changelog	2009-05-04 08:52:29 UTC (rev 3363)
@@ -10,10 +10,11 @@
     Added explicit hint in README.Debian how to proceed if you
     need the original name.
     Closes: #503367
-  * debian/patches/* - removed because applied upstream
-  * removed quilt dependency which is not needed any more
+  * debian/patches/20_plink-1.06-gcc4.4.patch: Patch to compile
+    using gcc 4.4
+  * debian/rules: Make sure example data files are not executable
 
- -- Andreas Tille <tille at debian.org>  Tue, 31 Mar 2009 22:28:25 +0200
+ -- Andreas Tille <tille at debian.org>  Mon, 04 May 2009 10:17:04 +0200
 
 plink (1.03p1-1) unstable; urgency=low
 

Modified: trunk/packages/plink/trunk/debian/control
===================================================================
--- trunk/packages/plink/trunk/debian/control	2009-05-03 20:48:31 UTC (rev 3362)
+++ trunk/packages/plink/trunk/debian/control	2009-05-04 08:52:29 UTC (rev 3363)
@@ -4,7 +4,7 @@
 Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Steffen Moeller <moeller at debian.org>,
  Andreas Tille <tille at debian.org>
-Build-Depends: debhelper (>= 5)
+Build-Depends: debhelper (>= 5), quilt
 Standards-Version: 3.8.1
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/plink/trunk/?rev=0&sc=0
 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/plink/trunk/

Added: trunk/packages/plink/trunk/debian/patches/20_plink-1.06-gcc4.4.patch
===================================================================
--- trunk/packages/plink/trunk/debian/patches/20_plink-1.06-gcc4.4.patch	                        (rev 0)
+++ trunk/packages/plink/trunk/debian/patches/20_plink-1.06-gcc4.4.patch	2009-05-04 08:52:29 UTC (rev 3363)
@@ -0,0 +1,14 @@
+Author: Andreas Tille
+Puropose: Compile with gcc 4.4
+Forwarded: Shaun Purcell <plink at chgr.mgh.harvard.edu>
+License: same as plink itself.
+--- plink-1.06-src.orig/blox.cpp
++++ plink-1.06-src/blox.cpp
+@@ -15,6 +15,7 @@
+ #include <iomanip>
+ #include <string>
+ #include <cmath>
++#include <cstdlib>
+ 
+ #include "options.h"
+ #include "helper.h"

Added: trunk/packages/plink/trunk/debian/patches/series
===================================================================
--- trunk/packages/plink/trunk/debian/patches/series	                        (rev 0)
+++ trunk/packages/plink/trunk/debian/patches/series	2009-05-04 08:52:29 UTC (rev 3363)
@@ -0,0 +1 @@
+20_plink-1.06-gcc4.4.patch

Modified: trunk/packages/plink/trunk/debian/rules
===================================================================
--- trunk/packages/plink/trunk/debian/rules	2009-05-03 20:48:31 UTC (rev 3362)
+++ trunk/packages/plink/trunk/debian/rules	2009-05-04 08:52:29 UTC (rev 3363)
@@ -1,8 +1,10 @@
 #!/usr/bin/make -f
 # -*- makefile -*-
 
-# include /usr/share/quilt/quilt.make
+include /usr/share/quilt/quilt.make
 
+pkg=plink
+
 build: patch build-stamp
 build-stamp:
 	$(MAKE) CXX_UNIX=g++ WITH_R_PLUGINS=1
@@ -25,6 +27,7 @@
 	dh_installchangelogs
 	dh_installdocs
 	dh_installexamples
+	chmod 644 debian/$(pkg)/usr/share/doc/$(pkg)/examples/*
 	dh_install
 	dh_installman
 	dh_link