[med-svn] [SCM] picard-tools branch, master, updated. upstream/1.41-29-g3a1681d

[Shaun Jackman]

The following commit has been merged in the master branch:
commit 721735111cf7f05a0c9c26c70904a8d367491850
Merge: d4e09d4804d11f7fe6d6a323786e9e77a2e26c6e 956f63731b186436dccc1cbf0272d01ba7203f5d
Author: Shaun Jackman <sjackman at debian.org>
Date:   Tue Mar 22 10:28:48 2011 -0700

    Merge commit 'upstream/1.41'


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manipulate SAM and BAM files