[med-svn] [SCM] emboss annotated tag, debian/6.4.0-1, created. debian/6.4.0-1

[Charles Plessy]

The annotated tag, debian/6.4.0-1 has been created
        at  517d7b6a0854b2ea3e8dc24c314036512d1bb914 (tag)
   tagging  0163715e35f65357ac9adeb9b66d21e599386c40 (commit)
  replaces  debian/6.3.1-6
 tagged by  Charles Plessy
        on  Wed Jun 20 20:04:14 2012 +0900

- Shortlog ------------------------------------------------------------
emboss (6.4.0-1) unstable; urgency=low

  [ Charles Plessy ]
  * New upstream release.
  * Removed calls to dh_makeshlibs in debian/rules (closes: #595613).
  * Build on libpng-dev instead of libpng12-dev (closes: #662313).
  * Breaks: EMBASSY <= 6.3.1 (debian/control).

  [ Andreas Tille ]
  * debian/upstream: separate reference section
  * debian/rules:
     - Make sure every binary package has a changelog file
     - enable hardening
     - do not clean backup file which is part of upstream tarball
     - remove executable flag from some test data
     - restore executable flag of some jemboss utils which seems to
       be removed by install target
  * debian/control:
     - remove article from description
     - Standards-Version: 3.9.3 (no changes needed)
  * debian/emboss.menu: delete - chances that users will pick command
    line programs from longish menu entries are pretty low
  * debian/emboss-lib.lintian-overrides: Adapted string of lintian
    warning

 -- Charles Plessy <plessy at debian.org>  Wed, 20 Jun 2012 18:55:16 +0900
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Andreas Tille (11):
      separate reference section as it is parsed by UDD gatherer for upstream files
      Fix lintian errors about missing changelog files
      Really enable hardening
      General updates: Standards-Version; source/format 3.0 (quilt); remove article from short description; updated patches using quilt push; quilt refresh
      Fix some menu issues and create lintian overrides were needed
      do not clean backup file which is part of upstream tarball
      Remove executable flag from some test data
      restore executable flag of some jemboss utils which seems to be removed by install target
      Revert switch to source/format 3.0 (quilt) and recreate original upstream patch as well as quilt Build-Depends accordingt to the hint of Charles Plessy
      Drop menu of command line tools
      debian/emboss-lib.lintian-overrides: Adapted string of lintian warning

Charles Plessy (27):
      # Removed calls to dh_makeshlibs in debian/rules.
      Imported Upstream version 6.4.0
      Merge commit 'upstream/6.4.0'
      Found files with a non-free license, but perhaps not copyrightable.
      New upstream relase (no new license terms found).
      Refreshed upstream patch using version 1-21 released on Tue, 6 Sep 2011.
      Corrected a spelling error in debian/README.debian.
      Conforms with Policy 3.9.2 (no changes needed).
      Renamed debian/upstream-metadata.yaml to debian/upstream.
      Moved DOI and PubMed to the Reference namespace.
      YAML syntax correction.
      Build on libpng-dev instead of libpng12-dev.
      Using Debhelper compatibility level 9.
      Machine-readable Debian copyright file, concluding that the UniProt records are not copyrighted.
      Obtain the ACD files from the Git repository.
      Updated or added manpages.  emboss/acd/template.acd was left aside.
      Signal the use of git-buildpackage with its configuration file.
      Stop deleting debian/copyright as it is not a generated file anymore.
      Verbose Debhelper.
      Compress binary packages with xz using Debhelper overrides.
      Preparing the use of dh by transferring rules to Debhelper overrides.
      Build using dh_auto_build.
      Build with dh.
      Clean with dh.
      Build using Debhlelper's dh command.
      Breaks: EMBASSY <= 6.3.1
      emboss (6.4.0-1) unstable; urgency=low

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