[med-svn] [SCM] vegan branch, build/amd64, updated. build/amd64/2.0-3-1-1-g76de953
Charles Plessy
plessy at debian.org
Mon Apr 8 04:25:45 UTC 2013
The following commit has been merged in the build/amd64 branch:
commit 76de9538b9bbf25e77540c8eebf299ad6e325a14
Author: Charles Plessy <plessy at debian.org>
Date: Mon Apr 8 13:23:44 2013 +0900
r-cran-vegan (2.0-7-1) unstable; urgency=low
8136fa9 Imported Upstream version 2.0-7
049dcc3 No new license not copyright notice in the new upstream release.
d291a8a Removed obsolete DM-Upload-Allowed field.
267d818 Normalised VCS URLs following Lintian's standard.
4601587 Using Debhelper 9.
45db17d Conforms to Policy 3.9.4.
-- Charles Plessy <plessy at debian.org> Mon, 08 Apr 2013 13:18:12 +0900
diff --git a/log b/log
index 29bc54e..b8fb5dd 100644
--- a/log
+++ b/log
@@ -1,27 +1,33 @@
-sbuild (Debian sbuild) 0.62.6 (07 Dec 2011) on anx191
+sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on anx191
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-cran-vegan 2.0-3-1 (amd64) 19 Mar 2012 13:16 ║
+║ r-cran-vegan 2.0-7-1 (amd64) 08 Apr 2013 13:20 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-cran-vegan
-Version: 2.0-3-1
-Source Version: 2.0-3-1
+Version: 2.0-7-1
+Source Version: 2.0-7-1
Distribution: unstable
-Architecture: amd64
+Machine Architecture: amd64
+Host Architecture: amd64
+Build Architecture: amd64
-I: NOTICE: Log filtering will replace 'build/r-cran-vegan-7fDJkk/r-cran-vegan-2.0-3' with '«PKGBUILDDIR»'
-I: NOTICE: Log filtering will replace 'build/r-cran-vegan-7fDJkk' with '«BUILDDIR»'
-I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-amd64-sbuild-8bd3fce9-ddbe-406c-85b5-82fdb77eb8f7' with '«CHROOT»'
+I: NOTICE: Log filtering will replace 'build/r-cran-vegan-pM2zja/r-cran-vegan-2.0-7' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-cran-vegan-pM2zja' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-amd64-sbuild-88cd3e24-8b0d-4031-8fc0-48e34b05cf35' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
-Hit http://ftp.jp.debian.org sid InRelease
+Hit http://ftp.riken.jp sid Release.gpg
+Hit http://ftp.riken.jp sid Release
+Hit http://ftp.riken.jp sid/main amd64 Packages/DiffIndex
+Hit http://ftp.jp.debian.org sid Release.gpg
+Hit http://ftp.riken.jp sid/main Translation-en/DiffIndex
+Hit http://ftp.jp.debian.org sid Release
Hit http://ftp.jp.debian.org sid/main amd64 Packages/DiffIndex
-Hit http://ftp.jp.debian.org sid/main TranslationIndex
-Hit http://ftp.jp.debian.org sid/main Translation-en
+Hit http://ftp.jp.debian.org sid/main Translation-en/DiffIndex
Reading package lists...
Reading package lists...
Building dependency tree...
@@ -36,14 +42,14 @@ Reading state information...
Local sources
─────────────
-r-cran-vegan_2.0-3-1.dsc exists in .; copying to chroot
+r-cran-vegan_2.0-7-1.dsc exists in .; copying to chroot
Check arch
──────────
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
-dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-9OYZrZ/apt_archive/sbuild-build-depends-core-dummy.deb'.
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-nqDXBf/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Reading package lists...
@@ -57,9 +63,9 @@ Building dependency tree...
Reading state information...
sbuild-build-depends-core-dummy is already the newest version.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
-Merged Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222), r-cran-lattice, r-cran-permute
-Filtered Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222), r-cran-lattice, r-cran-permute
-dpkg-deb: building package `sbuild-build-depends-r-cran-vegan-dummy' in `/«BUILDDIR»/resolver-yznDIj/apt_archive/sbuild-build-depends-r-cran-vegan-dummy.deb'.
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev (>= 2.14.2~20120222), r-cran-lattice, r-cran-permute
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev (>= 2.14.2~20120222), r-cran-lattice, r-cran-permute
+dpkg-deb: building package `sbuild-build-depends-r-cran-vegan-dummy' in `/«BUILDDIR»/resolver-lIRaD3/apt_archive/sbuild-build-depends-r-cran-vegan-dummy.deb'.
OK
Reading package lists...
@@ -72,350 +78,398 @@ Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
- libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
+ cdbs debhelper file fontconfig fontconfig-config gettext gettext-base
+ gfortran gfortran-4.7 groff-base html2text intltool-debian libasprintf-dev
+ libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgettextpo-dev
+ libgettextpo0 libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
libpipeline1 libpixman-1-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libthai-data libthai0 libtiff4 libtinfo-dev libunistring0 libx11-6
+ libsm6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev r-cran-lattice r-cran-permute tcl8.5 tk8.5 ttf-dejavu-core unzip
- x11-common xdg-utils zip zlib1g-dev
+ r-base-dev r-cran-lattice r-cran-permute tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- devscripts dh-make curl defoma gettext-doc gfortran-multilib gfortran-doc
- gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
+ devscripts dh-make gettext-doc gfortran-multilib gfortran-doc
+ gfortran-4.7-multilib gfortran-4.7-doc libgfortran3-dbg groff ncurses-doc
ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
ttf-arphic-bkai00mp less www-browser libmail-box-perl r-doc-info r-doc-pdf
r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
- texi2html r-cran-vegan r-cran-testthat tclreadline gvfs-bin
+ texi2html r-cran-vegan r-cran-testthat tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info xml-core
- libmail-sendmail-perl r-recommended r-doc-html xterm x-terminal-emulator
- libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
- x11-xserver-utils
+ autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
- libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
+ cdbs debhelper file fontconfig fontconfig-config gettext gettext-base
+ gfortran gfortran-4.7 groff-base html2text intltool-debian libasprintf-dev
+ libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgettextpo-dev
+ libgettextpo0 libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
libpipeline1 libpixman-1-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libthai-data libthai0 libtiff4 libtinfo-dev libunistring0 libx11-6
+ libsm6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
r-base-dev r-cran-lattice r-cran-permute
- sbuild-build-depends-r-cran-vegan-dummy tcl8.5 tk8.5 ttf-dejavu-core unzip
- x11-common xdg-utils zip zlib1g-dev
-0 upgraded, 77 newly installed, 0 to remove and 0 not upgraded.
-Need to get 40.1 MB/59.6 MB of archives.
-After this operation, 130 MB of additional disk space will be used.
-Get:1 http://ftp.jp.debian.org/debian/ sid/main libpipeline1 amd64 1.2.1-1 [39.2 kB]
-Get:2 http://ftp.jp.debian.org/debian/ sid/main libmagic1 amd64 5.11-1 [250 kB]
-Get:3 http://ftp.jp.debian.org/debian/ sid/main fontconfig-config all 2.8.0-3.1 [219 kB]
-Get:4 http://ftp.jp.debian.org/debian/ sid/main libfontconfig1 amd64 2.8.0-3.1 [283 kB]
-Get:5 http://ftp.jp.debian.org/debian/ sid/main libpixman-1-0 amd64 0.24.4-1 [406 kB]
-Get:6 http://ftp.jp.debian.org/debian/ sid/main libxcb1 amd64 1.8.1-1 [50.0 kB]
-Get:7 http://ftp.jp.debian.org/debian/ sid/main libxcb-render0 amd64 1.8.1-1 [18.4 kB]
-Get:8 http://ftp.jp.debian.org/debian/ sid/main libxcb-shm0 amd64 1.8.1-1 [10.1 kB]
-Get:9 http://ftp.jp.debian.org/debian/ sid/main libcairo2 amd64 1.10.2-7 [933 kB]
-Get:10 http://ftp.jp.debian.org/debian/ sid/main libglib2.0-0 amd64 2.30.2-6 [1846 kB]
-Get:11 http://ftp.jp.debian.org/debian/ sid/main libxml2 amd64 2.7.8.dfsg-7 [895 kB]
-Get:12 http://ftp.jp.debian.org/debian/ sid/main libcroco3 amd64 0.6.4-2 [150 kB]
-Get:13 http://ftp.jp.debian.org/debian/ sid/main libdatrie1 amd64 0.2.5-3 [28.6 kB]
-Get:14 http://ftp.jp.debian.org/debian/ sid/main libgfortran3 amd64 4.6.3-1 [358 kB]
-Get:15 http://ftp.jp.debian.org/debian/ sid/main x11-common all 1:7.6+12 [283 kB]
-Get:16 http://ftp.jp.debian.org/debian/ sid/main libjpeg8 amd64 8d-1 [134 kB]
-Get:17 http://ftp.jp.debian.org/debian/ sid/main libthai-data all 0.1.17-1 [205 kB]
-Get:18 http://ftp.jp.debian.org/debian/ sid/main libthai0 amd64 0.1.17-1 [44.8 kB]
-Get:19 http://ftp.jp.debian.org/debian/ sid/main fontconfig amd64 2.8.0-3.1 [335 kB]
-Get:20 http://ftp.jp.debian.org/debian/ sid/main libpango1.0-0 amd64 1.29.4-3 [456 kB]
-Get:21 http://ftp.jp.debian.org/debian/ sid/main libtiff4 amd64 3.9.6-1 [199 kB]
-Get:22 http://ftp.jp.debian.org/debian/ sid/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
-Get:23 http://ftp.jp.debian.org/debian/ sid/main tcl8.5 amd64 8.5.11-1 [1633 kB]
-Get:24 http://ftp.jp.debian.org/debian/ sid/main tk8.5 amd64 8.5.11-1 [1183 kB]
-Get:25 http://ftp.jp.debian.org/debian/ sid/main r-base-core amd64 2.15.0~20120317-1 [20.5 MB]
-Get:26 http://ftp.jp.debian.org/debian/ sid/main r-cran-permute all 0.6-3-1 [209 kB]
-Get:27 http://ftp.jp.debian.org/debian/ sid/main man-db amd64 2.6.1-1 [1057 kB]
-Get:28 http://ftp.jp.debian.org/debian/ sid/main file amd64 5.11-1 [53.2 kB]
-Get:29 http://ftp.jp.debian.org/debian/ sid/main cdbs all 0.4.109 [79.4 kB]
-Get:30 http://ftp.jp.debian.org/debian/ sid/main debhelper all 9.20120312 [694 kB]
-Get:31 http://ftp.jp.debian.org/debian/ sid/main dpatch all 2.0.35 [95.2 kB]
-Get:32 http://ftp.jp.debian.org/debian/ sid/main gfortran-4.6 amd64 4.6.3-1 [5564 kB]
-Get:33 http://ftp.jp.debian.org/debian/ sid/main gfortran amd64 4:4.6.2-4 [1130 B]
-Get:34 http://ftp.jp.debian.org/debian/ sid/main libbz2-dev amd64 1.0.6-1 [32.1 kB]
-Get:35 http://ftp.jp.debian.org/debian/ sid/main libjpeg8-dev amd64 8d-1 [242 kB]
-Get:36 http://ftp.jp.debian.org/debian/ sid/main zlib1g-dev amd64 1:1.2.6.dfsg-2 [213 kB]
-Get:37 http://ftp.jp.debian.org/debian/ sid/main libpng12-dev amd64 1.2.47-1 [267 kB]
-Get:38 http://ftp.jp.debian.org/debian/ sid/main libreadline6-dev amd64 6.2-8 [264 kB]
-Get:39 http://ftp.jp.debian.org/debian/ sid/main libreadline-dev amd64 6.2-8 [890 B]
-Get:40 http://ftp.jp.debian.org/debian/ sid/main r-base-dev all 2.15.0~20120317-1 [3910 B]
-Get:41 http://ftp.jp.debian.org/debian/ sid/main r-cran-lattice amd64 0.20-6-1 [713 kB]
+ sbuild-build-depends-r-cran-vegan-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
+0 upgraded, 82 newly installed, 0 to remove and 0 not upgraded.
+Need to get 60.2 MB/61.2 MB of archives.
+After this operation, 133 MB of additional disk space will be used.
+Get:1 http://ftp.riken.jp/Linux/debian/debian/ sid/main libpipeline1 amd64 1.2.2-2 [40.0 kB]
+Get:2 http://ftp.riken.jp/Linux/debian/debian/ sid/main groff-base amd64 1.22.2-1 [743 kB]
+Get:3 http://ftp.riken.jp/Linux/debian/debian/ sid/main man-db amd64 2.6.3-3 [898 kB]
+Get:4 http://ftp.riken.jp/Linux/debian/debian/ sid/main libmagic1 amd64 1:5.11-3 [202 kB]
+Get:5 http://ftp.riken.jp/Linux/debian/debian/ sid/main libpcre3 amd64 1:8.31-2 [247 kB]
+Get:6 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxml2 amd64 2.8.0+dfsg1-7+nmu1 [904 kB]
+Get:7 http://ftp.riken.jp/Linux/debian/debian/ sid/main libexpat1 amd64 2.1.0-1 [141 kB]
+Get:8 http://ftp.riken.jp/Linux/debian/debian/ sid/main libfreetype6 amd64 2.4.9-1.1 [451 kB]
+Get:9 http://ftp.riken.jp/Linux/debian/debian/ sid/main ttf-dejavu-core all 2.33-3 [1021 kB]
+Get:10 http://ftp.riken.jp/Linux/debian/debian/ sid/main fontconfig-config all 2.9.0-7.1 [233 kB]
+Get:11 http://ftp.riken.jp/Linux/debian/debian/ sid/main libfontconfig1 amd64 2.9.0-7.1 [300 kB]
+Get:12 http://ftp.riken.jp/Linux/debian/debian/ sid/main libpixman-1-0 amd64 0.26.0-4 [427 kB]
+Get:13 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxau6 amd64 1:1.0.7-1 [18.8 kB]
+Get:14 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxdmcp6 amd64 1:1.1.1-1 [26.3 kB]
+Get:15 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxcb1 amd64 1.8.1-2 [50.1 kB]
+Get:16 http://ftp.riken.jp/Linux/debian/debian/ sid/main libx11-data all 2:1.5.0-1 [189 kB]
+Get:17 http://ftp.riken.jp/Linux/debian/debian/ sid/main libx11-6 amd64 2:1.5.0-1 [901 kB]
+Get:18 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxcb-render0 amd64 1.8.1-2 [18.5 kB]
+Get:19 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxcb-shm0 amd64 1.8.1-2 [10.3 kB]
+Get:20 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxrender1 amd64 1:0.9.7-1 [32.2 kB]
+Get:21 http://ftp.riken.jp/Linux/debian/debian/ sid/main libcairo2 amd64 1.12.2-3 [912 kB]
+Get:22 http://ftp.riken.jp/Linux/debian/debian/ sid/main libglib2.0-0 amd64 2.33.12+really2.32.4-5 [1838 kB]
+Get:23 http://ftp.riken.jp/Linux/debian/debian/ sid/main libcroco3 amd64 0.6.6-2 [134 kB]
+Get:24 http://ftp.riken.jp/Linux/debian/debian/ sid/main libdatrie1 amd64 0.2.5-3 [28.6 kB]
+Get:25 http://ftp.riken.jp/Linux/debian/debian/ sid/main libgettextpo0 amd64 0.18.1.1-10 [145 kB]
+Get:26 http://ftp.riken.jp/Linux/debian/debian/ sid/main libgfortran3 amd64 4.7.2-5 [351 kB]
+Get:27 http://ftp.riken.jp/Linux/debian/debian/ sid/main x11-common all 1:7.7+2 [284 kB]
+Get:28 http://ftp.riken.jp/Linux/debian/debian/ sid/main libice6 amd64 2:1.0.8-2 [63.1 kB]
+Get:29 http://ftp.riken.jp/Linux/debian/debian/ sid/main libjpeg8 amd64 8d-1 [134 kB]
+Get:30 http://ftp.riken.jp/Linux/debian/debian/ sid/main libthai-data all 0.1.18-2 [154 kB]
+Get:31 http://ftp.riken.jp/Linux/debian/debian/ sid/main libthai0 amd64 0.1.18-2 [42.3 kB]
+Get:32 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxft2 amd64 2.3.1-1 [61.0 kB]
+Get:33 http://ftp.riken.jp/Linux/debian/debian/ sid/main fontconfig amd64 2.9.0-7.1 [348 kB]
+Get:34 http://ftp.riken.jp/Linux/debian/debian/ sid/main libpango1.0-0 amd64 1.30.0-1 [461 kB]
+Get:35 http://ftp.riken.jp/Linux/debian/debian/ sid/main libpaper1 amd64 1.1.24+nmu2 [22.0 kB]
+Get:36 http://ftp.riken.jp/Linux/debian/debian/ sid/main libpcrecpp0 amd64 1:8.31-2 [128 kB]
+Get:37 http://ftp.riken.jp/Linux/debian/debian/ sid/main libsm6 amd64 2:1.2.1-2 [34.2 kB]
+Get:38 http://ftp.riken.jp/Linux/debian/debian/ sid/main libjbig0 amd64 2.0-2 [32.2 kB]
+Get:39 http://ftp.riken.jp/Linux/debian/debian/ sid/main libtiff5 amd64 4.0.2-6 [234 kB]
+Get:40 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxext6 amd64 2:1.3.1-2 [55.3 kB]
+Get:41 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxss1 amd64 1:1.2.2-1 [17.5 kB]
+Get:42 http://ftp.riken.jp/Linux/debian/debian/ sid/main libxt6 amd64 1:1.1.3-1 [211 kB]
+Get:43 http://ftp.riken.jp/Linux/debian/debian/ sid/main file amd64 1:5.11-3 [52.0 kB]
+Get:44 http://ftp.riken.jp/Linux/debian/debian/ sid/main cdbs all 0.4.120 [80.4 kB]
+Get:45 http://ftp.riken.jp/Linux/debian/debian/ sid/main libasprintf-dev amd64 0.18.1.1-10 [26.8 kB]
+Get:46 http://ftp.riken.jp/Linux/debian/debian/ sid/main libgettextpo-dev amd64 0.18.1.1-10 [184 kB]
+Get:47 http://ftp.riken.jp/Linux/debian/debian/ sid/main gettext amd64 0.18.1.1-10 [1815 kB]
+Get:48 http://ftp.riken.jp/Linux/debian/debian/ sid/main debhelper all 9.20120909 [705 kB]
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-Selecting previously unselected package libreadline6-dev.
-Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_amd64.deb) ...
-Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_amd64.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-3_amd64.deb) ...
+Selecting previously unselected package libreadline6-dev:amd64.
+Unpacking libreadline6-dev:amd64 (from .../libreadline6-dev_6.2+dfsg-0.1_amd64.deb) ...
+Selecting previously unselected package libreadline-dev:amd64.
+Unpacking libreadline-dev:amd64 (from .../libreadline-dev_6.2+dfsg-0.1_amd64.deb) ...
+Selecting previously unselected package zip.
+Unpacking zip (from .../archives/zip_3.0-7_amd64.deb) ...
+Selecting previously unselected package unzip.
+Unpacking unzip (from .../archives/unzip_6.0-9_amd64.deb) ...
+Selecting previously unselected package xdg-utils.
+Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
+Selecting previously unselected package tcl8.5.
+Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_amd64.deb) ...
+Selecting previously unselected package tk8.5.
+Unpacking tk8.5 (from .../tk8.5_8.5.11-2_amd64.deb) ...
+Selecting previously unselected package r-base-core.
+Unpacking r-base-core (from .../r-base-core_3.0.0-2_amd64.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.15.0~20120317-1_all.deb) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.0-2_all.deb) ...
Selecting previously unselected package r-cran-lattice.
-Unpacking r-cran-lattice (from .../r-cran-lattice_0.20-6-1_amd64.deb) ...
+Unpacking r-cran-lattice (from .../r-cran-lattice_0.20-15-1_amd64.deb) ...
+Selecting previously unselected package r-cran-permute.
+Unpacking r-cran-permute (from .../r-cran-permute_0.7-0-2_all.deb) ...
Selecting previously unselected package sbuild-build-depends-r-cran-vegan-dummy.
Unpacking sbuild-build-depends-r-cran-vegan-dummy (from .../sbuild-build-depends-r-cran-vegan-dummy.deb) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.11-1) ...
-Setting up libpcre3 (8.12-4) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
-Setting up ttf-dejavu-core (2.33-2) ...
-Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
-Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8.1-1) ...
-Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8.1-1) ...
-Setting up libxcb-shm0 (1.8.1-1) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libpipeline1:amd64 (1.2.2-2) ...
+Setting up groff-base (1.22.2-1) ...
+Setting up man-db (2.6.3-3) ...
+Building database of manual pages ...
+Setting up libasprintf0c2:amd64 (0.18.1.1-10) ...
+Setting up libmagic1:amd64 (1:5.11-3) ...
+Setting up libpcre3:amd64 (1:8.31-2) ...
+Setting up libxml2:amd64 (2.8.0+dfsg1-7+nmu1) ...
+Setting up libexpat1:amd64 (2.1.0-1) ...
+Setting up libfreetype6:amd64 (2.4.9-1.1) ...
+Setting up ucf (3.0025+nmu3) ...
+Setting up ttf-dejavu-core (2.33-3) ...
+Setting up fontconfig-config (2.9.0-7.1) ...
+Setting up libfontconfig1:amd64 (2.9.0-7.1) ...
+Setting up libpixman-1-0:amd64 (0.26.0-4) ...
+Setting up libxau6:amd64 (1:1.0.7-1) ...
+Setting up libxdmcp6:amd64 (1:1.1.1-1) ...
+Setting up libxcb1:amd64 (1.8.1-2) ...
+Setting up libx11-data (2:1.5.0-1) ...
+Setting up libx11-6:amd64 (2:1.5.0-1) ...
+Setting up libxcb-render0:amd64 (1.8.1-2) ...
+Setting up libxcb-shm0:amd64 (1.8.1-2) ...
+Setting up libxrender1:amd64 (1:0.9.7-1) ...
+Setting up libcairo2:amd64 (1.12.2-3) ...
+Setting up libffi5:amd64 (3.0.10-3) ...
+Setting up libglib2.0-0:amd64 (2.33.12+really2.32.4-5) ...
No schema files found: doing nothing.
-Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
-Setting up x11-common (1:7.6+12) ...
+Setting up libcroco3:amd64 (0.6.6-2) ...
+Setting up libdatrie1:amd64 (0.2.5-3) ...
+Setting up libunistring0:amd64 (0.9.3-5) ...
+Setting up libgettextpo0:amd64 (0.18.1.1-10) ...
+Setting up libgfortran3:amd64 (4.7.2-5) ...
+Setting up x11-common (1:7.7+2) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
-Setting up libjpeg8 (8d-1) ...
-Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3) ...
-Setting up fontconfig (2.8.0-3.1) ...
-Cleaning up old fontconfig caches... done.
+Setting up libice6:amd64 (2:1.0.8-2) ...
+Setting up libjpeg8:amd64 (8d-1) ...
+Setting up libthai-data (0.1.18-2) ...
+Setting up libthai0:amd64 (0.1.18-2) ...
+Setting up libxft2:amd64 (2.3.1-1) ...
+Setting up fontconfig (2.9.0-7.1) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-3) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5) ...
-Setting up libxext6 (2:1.3.0-3) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2) ...
-Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
-Setting up libpaper1 (1.1.24+nmu1) ...
+Setting up libpango1.0-0:amd64 (1.30.0-1) ...
+Setting up libpaper1:amd64 (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
-Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
-Setting up libblas3gf (1.2.20110419-2) ...
-update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
-Setting up liblapack3gf (3.3.1-1) ...
-update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
-Setting up tcl8.5 (8.5.11-1) ...
-update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
-Setting up tk8.5 (8.5.11-1) ...
-update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.15.0~20120317-1) ...
-Setting R_PAPERSIZE_USER default to 'a4'
-
-Creating config file /etc/R/Renviron with new version
-Setting up r-cran-permute (0.6-3-1) ...
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.1-1) ...
-Building database of manual pages ...
-Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.109) ...
+Setting up libpcrecpp0:amd64 (1:8.31-2) ...
+Setting up libsm6:amd64 (2:1.2.1-2) ...
+Setting up libjbig0:amd64 (2.0-2) ...
+Setting up libtiff5:amd64 (4.0.2-6) ...
+Setting up libxext6:amd64 (2:1.3.1-2) ...
+Setting up libxss1:amd64 (1:1.2.2-1) ...
+Setting up libxt6:amd64 (1:1.1.3-1) ...
+Setting up file (1:5.11-3) ...
+Setting up gettext-base (0.18.1.1-10) ...
+Setting up cdbs (0.4.120) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up libasprintf-dev:amd64 (0.18.1.1-10) ...
+Setting up libgettextpo-dev:amd64 (0.18.1.1-10) ...
+Setting up gettext (0.18.1.1-10) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120312) ...
-Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
-update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
-Setting up libblas-dev (1.2.20110419-2) ...
-update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
-Setting up liblapack-dev (3.3.1-1) ...
-update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
-Setting up libpcre3-dev (8.12-4) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8) ...
-Setting up libreadline-dev (6.2-8) ...
-Setting up r-base-dev (2.15.0~20120317-1) ...
-Setting up r-cran-lattice (0.20-6-1) ...
+Setting up debhelper (9.20120909) ...
+Setting up gfortran-4.7 (4.7.2-5) ...
+Setting up gfortran (4:4.7.2-1) ...
+update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
+Setting up libblas3 (1.2.20110419-5) ...
+update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
+Setting up libblas-dev (1.2.20110419-5) ...
+update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
+Setting up libbz2-dev:amd64 (1.0.6-4) ...
+Setting up libjpeg8-dev:amd64 (8d-1) ...
+Setting up liblapack3 (3.4.1+dfsg-1) ...
+update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
+Setting up liblapack-dev (3.4.1+dfsg-1) ...
+update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
+Setting up libtinfo-dev:amd64 (5.9-10) ...
+Setting up libncurses5-dev (5.9-10) ...
+Setting up libpaper-utils (1.1.24+nmu2) ...
+Setting up libpcre3-dev:amd64 (1:8.31-2) ...
+Setting up zlib1g-dev:amd64 (1:1.2.7.dfsg-13) ...
+Setting up libpng12-dev (1.2.49-3) ...
+Setting up libreadline6-dev:amd64 (6.2+dfsg-0.1) ...
+Setting up libreadline-dev:amd64 (6.2+dfsg-0.1) ...
+Setting up zip (3.0-7) ...
+Setting up unzip (6.0-9) ...
+Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
+Setting up tcl8.5 (8.5.11-2) ...
+update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
+Setting up tk8.5 (8.5.11-2) ...
+update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
+Setting up r-base-core (3.0.0-2) ...
+
+Creating config file /etc/R/Renviron with new version
+Setting up r-base-dev (3.0.0-2) ...
+Setting up r-cran-lattice (0.20-15-1) ...
+Setting up r-cran-permute (0.7-0-2) ...
Setting up sbuild-build-depends-r-cran-vegan-dummy (0.invalid.0) ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
-Kernel: Linux 2.6.39-bpo.2-amd64 amd64 (x86_64)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.10-1
-Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3.1 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120312 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-6 gzip_1.4-4 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 libgpm2_1.20.4-4 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libncurses5-dev_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-3 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libpod-plainer-perl_1.03-1 libquadmath0_4.6.3-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-1 libslang2_2.2.4-7 libsm6_2:1.2.0-2 libss2_1.42.1-2 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.10-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.15.0~20120317-1 r-base-dev_2.15.0~20120317-1 r-cran-lattice_0.20-6-1 r-cran-permute_0.6-3-1 readline-common_6.2-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-vegan-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: Linux 3.2.0-3-amd64 amd64 (x86_64)
+Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.7_4.7.2-5 gcc-4.7_4.7.2-5 libc6-dev_2.13-38 libstdc++6_4.7.2-5 libstdc++6-4.7-dev_4.7.2-5 linux-libc-dev_3.2.41-2
+Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bsdmainutils_9.0.4 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.120 coreutils_8.20-3 cpp_4:4.7.2-1 cpp-4.7_4.7.2-5 dash_0.5.7-3 debconf_1.5.49 debfoster_2.7-1.2 debhelper_9.20120909 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1:5.11-3 findutils_4.4.2-5 fontconfig_2.9.0-7.1 fontconfig-config_2.9.0-7.1 g++_4:4.7.2-1 g++-4.7_4.7.2-5 gcc_4:4.7.2-1 gcc-4.7_4.7.2-5 gcc-4.7-base_4.7.2-5 gettext_0.18.1.1-10 gettext-base_0.18.1.1-10 gfortran_4:4.7.2-1 gfortran-4.7_4.7.2-5 gnupg_1.4.12-7 gpgv_1.4.12-7 grep_2.14-1 groff-base_1.22.2-1 gzip_1.5-1.1 hostname_3.12 html2text_1.3.2a-15 initscripts_2.88dsf-41 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-8 libapt-pkg4.12_0.9.7.8 libasprintf-dev_0.18.1.1-10 libasprintf0c2_0.18.1.1-10 libattr1_1:2.4.46-8 libblas-dev_1.2.20110419-5 libblas3_1.2.20110419-5 libblkid1_2.20.1-5.3 libbz2-1.0_1.0.6-4 libbz2-dev_1.0.6-4 libc-bin_2.13-38 libc-dev-bin_2.13-38 libc6_2.13-38 libc6-dev_2.13-38 libcairo2_1.12.2-3 libclass-isa-perl_0.36-5 libcomerr2_1.42.5-1.1 libcroco3_0.6.6-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-5 libdpkg-perl_1.16.10 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-2 libfontconfig1_2.9.0-7.1 libfreetype6_2.4.9-1.1 libgc1c2_1:7.1-9.1 libgcc1_1:4.7.2-5 libgdbm3_1.8.3-11 libgettextpo-dev_0.18.1.1-10 libgettextpo0_0.18.1.1-10 libgfortran3_4.7.2-5 libglib2.0-0_2.33.12+really2.32.4-5 libgmp10_2:5.0.5+dfsg-2 libgomp1_4.7.2-5 libgpm2_1.20.4-6 libice6_2:1.0.8-2 libitm1_4.7.2-5 libjbig0_2.0-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.4.1+dfsg-1 liblapack3_3.4.1+dfsg-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20120614-2 libmagic1_1:5.11-3 libmount1_2.20.1-5.3 libmpc2_0.9-4 libmpfr4_3.1.1-1 libncurses5_5.9-10 libncurses5-dev_5.9-10 libpam-modules_1.1.3-9 libpam-modules-bin_1.1.3-9 libpam-runtime_1.1.3-9 libpam0g_1.1.3-9 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu2 libpaper1_1.1.24+nmu2 libpcre3_1:8.31-2 libpcre3-dev_1:8.31-2 libpcrecpp0_1:8.31-2 libpipeline1_1.2.2-2 libpixman-1-0_0.26.0-4 libpng12-0_1.2.49-3 libpng12-dev_1.2.49-3 libpod-plainer-perl_1.03-1 libquadmath0_4.7.2-5 libreadline-dev_6.2+dfsg-0.1 libreadline6_6.2+dfsg-0.1 libreadline6-dev_6.2+dfsg-0.1 libselinux1_2.1.9-5 libsemanage-common_2.1.6-6 libsemanage1_2.1.6-6 libsepol1_2.1.4-3 libslang2_2.2.4-15 libsm6_2:1.2.1-2 libss2_1.42.5-1.1 libstdc++6_4.7.2-5 libstdc++6-4.7-dev_4.7.2-5 libswitch-perl_2.16-2 libthai-data_0.1.18-2 libthai0_0.1.18-2 libtiff5_4.0.2-6 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-10 libtinfo5_5.9-10 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-23+nmu1 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.3 libx11-6_2:1.5.0-1 libx11-data_2:1.5.0-1 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-2 libxcb-shm0_1.8.1-2 libxcb1_1.8.1-2 libxdmcp6_1:1.1.1-1 libxext6_2:1.3.1-2 libxft2_2.3.1-1 libxml2_2.8.0+dfsg1-7+nmu1 libxrender1_1:0.9.7-1 libxss1_1:1.2.2-1 libxt6_1:1.1.3-1 linux-libc-dev_3.2.41-2 login_1:4.1.5.1-1 lsb-base_4.1+Debian9 make_3.81-8.2 man-db_2.6.3-3 mawk_1.3.3-17 mount_2.20.1-5.3 multiarch-support_2.13-38 ncurses-base_5.9-10 ncurses-bin_5.9-10 passwd_1:4.1.5.1-1 patch_2.6.1-3 perl_5.14.2-20 perl-base_5.14.2-20 perl-modules_5.14.2-20 po-debconf_1.0.16+nmu2 r-base-core_3.0.0-2 r-base-dev_3.0.0-2 r-cran-lattice_0.20-15-1 r-cran-permute_0.7-0-2 readline-common_6.2+dfsg-0.1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-vegan-dummy_0.invalid.0 sed_4.2.1-10 sensible-utils_0.0.7 sysv-rc_2.88dsf-41 sysvinit_2.88dsf-41 sysvinit-utils_2.88dsf-41 tar_1.26+dfsg-5 tcl8.5_8.5.11-2 tk8.5_8.5.11-2 ttf-dejavu-core_2.33-3 tzdata_2013b-2 ucf_3.0025+nmu3 unzip_6.0-9 util-linux_2.20.1-5.3 x11-common_1:7.7+2 xdg-utils_1.1.0~rc1+git20111210-7 xz-utils_5.1.1alpha+20120614-2 zip_3.0-7 zlib1g_1:1.2.7.dfsg-13 zlib1g-dev_1:1.2.7.dfsg-13
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -425,10 +479,10 @@ Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 bin
Unpack source
─────────────
-dpkg-source: warning: extracting unsigned source package (r-cran-vegan_2.0-3-1.dsc)
-dpkg-source: info: extracting r-cran-vegan in r-cran-vegan-2.0-3
-dpkg-source: info: unpacking r-cran-vegan_2.0-3.orig.tar.gz
-dpkg-source: info: applying r-cran-vegan_2.0-3-1.diff.gz
+dpkg-source: warning: extracting unsigned source package (r-cran-vegan_2.0-7-1.dsc)
+dpkg-source: info: extracting r-cran-vegan in r-cran-vegan-2.0-7
+dpkg-source: info: unpacking r-cran-vegan_2.0-7.orig.tar.gz
+dpkg-source: info: applying r-cran-vegan_2.0-7-1.diff.gz
Check disc space
────────────────
@@ -441,11 +495,12 @@ User Environment
HOME=/sbuild-nonexistent
LOGNAME=charles
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=chroot:sid-amd64-sbuild
SCHROOT_CHROOT_NAME=sid-amd64-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=1000
SCHROOT_GROUP=charles
-SCHROOT_SESSION_ID=sid-amd64-sbuild-8bd3fce9-ddbe-406c-85b5-82fdb77eb8f7
+SCHROOT_SESSION_ID=sid-amd64-sbuild-88cd3e24-8b0d-4031-8fc0-48e34b05cf35
SCHROOT_UID=31051
SCHROOT_USER=charles
SHELL=/bin/sh
@@ -457,9 +512,9 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-cran-vegan
-dpkg-buildpackage: source version 2.0-3-1
+dpkg-buildpackage: source version 2.0-7-1
dpkg-buildpackage: source changed by Charles Plessy <plessy at debian.org>
- dpkg-source --before-build r-cran-vegan-2.0-3
+ dpkg-source --before-build r-cran-vegan-2.0-7
dpkg-buildpackage: host architecture amd64
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -498,12 +553,12 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- dpkg-source -b r-cran-vegan-2.0-3
+ dpkg-source -b r-cran-vegan-2.0-7
dpkg-source: warning: no source format specified in debian/source/format, see dpkg-source(1)
dpkg-source: info: using source format `1.0'
-dpkg-source: info: building r-cran-vegan using existing r-cran-vegan_2.0-3.orig.tar.gz
-dpkg-source: info: building r-cran-vegan in r-cran-vegan_2.0-3-1.diff.gz
-dpkg-source: info: building r-cran-vegan in r-cran-vegan_2.0-3-1.dsc
+dpkg-source: info: building r-cran-vegan using existing r-cran-vegan_2.0-7.orig.tar.gz
+dpkg-source: info: building r-cran-vegan in r-cran-vegan_2.0-7-1.diff.gz
+dpkg-source: info: building r-cran-vegan in r-cran-vegan_2.0-7-1.dsc
debian/rules build
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -538,7 +593,7 @@ mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_DH_BUILDDEB_ARGS is a deprecated variable
dh_installdirs usr/lib/R/site-library
install -d debian/r-cran-vegan/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.15.0~20120317-1)" >> debian/r-cran-vegan.substvars
+echo "R:Depends=r-base-core (>= 3.0.0-2)" >> debian/r-cran-vegan.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-cran-vegan/usr/lib/R/site-library --clean \
@@ -551,16 +606,16 @@ if test -f /usr/bin/xvfb-run; then \
** package 'vegan' successfully unpacked and MD5 sums checked
** libs
make[1]: Entering directory `/«PKGBUILDDIR»/src'
-gfortran -fpic -O3 -pipe -g -c cepin.f -o cepin.o
-gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c data2hill.c -o data2hill.o
-gfortran -fpic -O3 -pipe -g -c decorana.f -o decorana.o
-gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c goffactor.c -o goffactor.o
-gfortran -fpic -O3 -pipe -g -c monoMDS.f -o monoMDS.o
-gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c nestedness.c -o nestedness.o
-gfortran -fpic -O3 -pipe -g -c ordering.f -o ordering.o
-gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c pnpoly.c -o pnpoly.o
-gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c stepacross.c -o stepacross.o
-gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c vegdist.c -o vegdist.o
+gfortran -fpic -O2 -pipe -g -c cepin.f -o cepin.o
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O2 -pipe -g -c data2hill.c -o data2hill.o
+gfortran -fpic -O2 -pipe -g -c decorana.f -o decorana.o
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O2 -pipe -g -c goffactor.c -o goffactor.o
+gfortran -fpic -O2 -pipe -g -c monoMDS.f -o monoMDS.o
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O2 -pipe -g -c nestedness.c -o nestedness.o
+gfortran -fpic -O2 -pipe -g -c ordering.f -o ordering.o
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O2 -pipe -g -c pnpoly.c -o pnpoly.o
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O2 -pipe -g -c stepacross.c -o stepacross.o
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O2 -pipe -g -c vegdist.c -o vegdist.o
gcc -std=gnu99 -shared -o vegan.so cepin.o data2hill.o decorana.o goffactor.o monoMDS.o nestedness.o ordering.o pnpoly.o stepacross.o vegdist.o -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR
make[1]: Leaving directory `/«PKGBUILDDIR»/src'
make[1]: Entering directory `/«PKGBUILDDIR»/src'
@@ -578,7 +633,6 @@ installing to /«PKGBUILDDIR»/debian/r-cran-vegan/usr/lib/R/site-library/vegan/
'diversity-vegan.Rnw' using 'UTF-8'
'intro-vegan.Rnw' using 'UTF-8'
** testing if installed package can be loaded
-
* DONE (vegan)
rm -vf /«PKGBUILDDIR»/debian/r-cran-vegan/usr/lib/R/site-library/R.css \
/«PKGBUILDDIR»/debian/r-cran-vegan/usr/lib/R/site-library/vegan/COPYING \
@@ -642,25 +696,25 @@ dh_installdeb -pr-cran-vegan
dh_perl -pr-cran-vegan
dh_shlibdeps -pr-cran-vegan
dpkg-shlibdeps -Tdebian/r-cran-vegan.substvars debian/r-cran-vegan/usr/lib/R/site-library/vegan/libs/vegan.so
-dpkg-shlibdeps: warning: dependency on libquadmath.so.0 could be avoided if "debian/r-cran-vegan/usr/lib/R/site-library/vegan/libs/vegan.so" were not uselessly linked against it (they use none of its symbols).
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-cran-vegan/usr/lib/R/site-library/vegan/libs/vegan.so was not linked against libquadmath.so.0 (it uses none of the library's symbols)
dh_gencontrol -pr-cran-vegan
echo misc:Depends= >> debian/r-cran-vegan.substvars
dpkg-gencontrol -ldebian/changelog -Tdebian/r-cran-vegan.substvars -Pdebian/r-cran-vegan
chmod 644 debian/r-cran-vegan/DEBIAN/control
chown 0:0 debian/r-cran-vegan/DEBIAN/control
dh_md5sums -pr-cran-vegan
- (cd debian/r-cran-vegan >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-cran-vegan >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-cran-vegan/DEBIAN/md5sums
chown 0:0 debian/r-cran-vegan/DEBIAN/md5sums
dh_builddeb -pr-cran-vegan -- -Z xz
dpkg-deb -Z xz --build debian/r-cran-vegan ..
-dpkg-deb: building package `r-cran-vegan' in `../r-cran-vegan_2.0-3-1_amd64.deb'.
- dpkg-genchanges >../r-cran-vegan_2.0-3-1_amd64.changes
+dpkg-deb: building package `r-cran-vegan' in `../r-cran-vegan_2.0-7-1_amd64.deb'.
+ dpkg-genchanges >../r-cran-vegan_2.0-7-1_amd64.changes
dpkg-genchanges: including full source code in upload
- dpkg-source --after-build r-cran-vegan-2.0-3
+ dpkg-source --after-build r-cran-vegan-2.0-7
dpkg-buildpackage: full upload (original source is included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120319-1317
+Build finished at 20130408-1321
Finished
────────
@@ -672,15 +726,15 @@ I: Built successfully
└──────────────────────────────────────────────────────────────────────────────┘
-r-cran-vegan_2.0-3-1_amd64.changes:
+r-cran-vegan_2.0-7-1_amd64.changes:
───────────────────────────────────
Format: 1.8
-Date: Mon, 19 Mar 2012 13:12:23 +0900
+Date: Mon, 08 Apr 2013 13:18:12 +0900
Source: r-cran-vegan
Binary: r-cran-vegan
Architecture: source amd64
-Version: 2.0-3-1
+Version: 2.0-7-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
@@ -688,44 +742,49 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-cran-vegan - Community Ecology Package for R
Changes:
- r-cran-vegan (2.0-3-1) unstable; urgency=low
+ r-cran-vegan (2.0-7-1) unstable; urgency=low
.
- b6a9868 Imported Upstream version 2.0-3
+ 8136fa9 Imported Upstream version 2.0-7
+ 049dcc3 No new license not copyright notice in the new upstream release.
+ d291a8a Removed obsolete DM-Upload-Allowed field.
+ 267d818 Normalised VCS URLs following Lintian's standard.
+ 4601587 Using Debhelper 9.
+ 45db17d Conforms to Policy 3.9.4.
Checksums-Sha1:
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- 45974bad9f0c869fb85983bdded50c261bfe3a55 1540468 r-cran-vegan_2.0-3.orig.tar.gz
- 561fad479f1301f7ef68ea7f337477fe75755c13 8322 r-cran-vegan_2.0-3-1.diff.gz
- d675cba4c4559f95fff7aa91ca004f4d703a998f 2167320 r-cran-vegan_2.0-3-1_amd64.deb
+ 92df6e4f49d5151cd66e889c4852bd22e34c9795 1128 r-cran-vegan_2.0-7-1.dsc
+ 92ea9b57b9f97f0b1c9f093bedcd2d1f38046a4d 1578888 r-cran-vegan_2.0-7.orig.tar.gz
+ 83280e6a3571264cda0f793eefb790a17ad5caaf 8472 r-cran-vegan_2.0-7-1.diff.gz
+ cb4b9b215fb439945bf45d269f6c2a8aaebefa5c 2217056 r-cran-vegan_2.0-7-1_amd64.deb
Checksums-Sha256:
- 68415a1ff1af49d375971283910831bd8079dba1a9f67f712d1dca7cb39e8295 1136 r-cran-vegan_2.0-3-1.dsc
- fa06df47a9681e4c045dfe55870ec1a10e4c6404150e9b4797f64e05848dd91c 1540468 r-cran-vegan_2.0-3.orig.tar.gz
- 68a722bf59f9c5ecd6b2bdca7a60faad95748498881b7e69088b2730b5ff5a87 8322 r-cran-vegan_2.0-3-1.diff.gz
- 8f0c2b8716eb2d58ca4c38a06a36d149de79811fdd6961802fa5a13961151fb9 2167320 r-cran-vegan_2.0-3-1_amd64.deb
+ f48d581c69d6c063c49644cb17bb5fc0766b7ba1d96f857595a1e7e9df41397c 1128 r-cran-vegan_2.0-7-1.dsc
+ 28e6587329c08ae22e85b77afaa0fa2d966e33bb57e52eb4b2ade987c32a31eb 1578888 r-cran-vegan_2.0-7.orig.tar.gz
+ 1b2266a45879aca517d16e1b6f27377c5a36f50c187cd8224841b0236dda273f 8472 r-cran-vegan_2.0-7-1.diff.gz
+ df76f3786ca25937e992d2798292cd68396e9b326c8d5a07b161a1120c305471 2217056 r-cran-vegan_2.0-7-1_amd64.deb
Files:
- 8b02d585cdffaa6f9c903a842047ee36 1136 gnu-r optional r-cran-vegan_2.0-3-1.dsc
- 0bf54508bd04de611a9f3633d1759cee 1540468 gnu-r optional r-cran-vegan_2.0-3.orig.tar.gz
- 223905ebc1a86186507d7fbd09718b63 8322 gnu-r optional r-cran-vegan_2.0-3-1.diff.gz
- 3138c0dd0d8677e13560963dc553cc18 2167320 gnu-r optional r-cran-vegan_2.0-3-1_amd64.deb
+ 67fadd82309918b5f8e0200fa1e2e4d3 1128 gnu-r optional r-cran-vegan_2.0-7-1.dsc
+ 314bedb7018d09e3f52edc3bb09b9369 1578888 gnu-r optional r-cran-vegan_2.0-7.orig.tar.gz
+ d26d75b9cdad2ddc92a3c41bad9ad64b 8472 gnu-r optional r-cran-vegan_2.0-7-1.diff.gz
+ e8340c2b3fc30c7b42b69ec85cf249cb 2217056 gnu-r optional r-cran-vegan_2.0-7-1_amd64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-cran-vegan_2.0-3-1_amd64.deb
+r-cran-vegan_2.0-7-1_amd64.deb
──────────────────────────────
new debian package, version 2.0.
- size 2167320 bytes: control archive= 2212 bytes.
- 920 bytes, 19 lines control
+ size 2217056 bytes: control archive=2199 bytes.
+ 910 bytes, 19 lines control
4014 bytes, 51 lines md5sums
Package: r-cran-vegan
- Version: 2.0-3-1
+ Version: 2.0-7-1
Architecture: amd64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 2703
+ Installed-Size: 2772
Pre-Depends: dpkg (>= 1.15.6)
- Depends: r-base-core (>= 2.15.0~20120317-1), libc6 (>= 2.2.5), libgfortran3 (>= 4.3), libquadmath0 (>= 4.6), r-cran-permute, r-cran-lattice
+ Depends: r-base-core (>= 3.0.0-2), libc6 (>= 2.2.5), libgfortran3 (>= 4.3), libquadmath0 (>= 4.6), r-cran-permute, r-cran-lattice
Recommends: r-cran-mgcv, r-cran-cluster, r-other-tcltk
Suggests: r-cran-scatterplot3d, r-cran-rgl
Section: gnu-r
@@ -739,73 +798,73 @@ r-cran-vegan_2.0-3-1_amd64.deb
These tools are sometimes used outside the field of ecology, for instance to
study populations of white blood cells or RNA molecules.
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./
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-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/
--rw-r--r-- root/root 174370 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/ChangeLog
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/R/
--rw-r--r-- root/root 383 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/R/vegan
--rw-r--r-- root/root 5904 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/R/vegan.rdx
--rw-r--r-- root/root 301172 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/R/vegan.rdb
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/help/
--rw-r--r-- root/root 9939 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/help/AnIndex
--rw-r--r-- root/root 3308 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/help/aliases.rds
--rw-r--r-- root/root 938 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/help/paths.rds
--rw-r--r-- root/root 2454 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/help/vegan.rdx
--rw-r--r-- root/root 770064 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/help/vegan.rdb
--rw-r--r-- root/root 94769 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/ONEWS
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/
--rw-r--r-- root/root 801 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/dune.taxon.rda
--rw-r--r-- root/root 2062 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/mite.rda
--rw-r--r-- root/root 464 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/dune.env.rda
--rw-r--r-- root/root 418 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/mite.xy.rda
--rw-r--r-- root/root 2102 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/varespec.rda
--rw-r--r-- root/root 12316 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/mite.pcnm.rda
--rw-r--r-- root/root 830 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/sipoo.rda
--rw-r--r-- root/root 729 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/dune.rda
--rw-r--r-- root/root 8093 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/BCI.rda
--rw-r--r-- root/root 1187 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/varechem.rda
--rw-r--r-- root/root 14208 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/pyrifos.rda
--rw-r--r-- root/root 1210 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/data/mite.env.rda
--rw-r--r-- root/root 11500 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/NAMESPACE
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/html/
--rw-r--r-- root/root 61707 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/html/00Index.html
--rw-r--r-- root/root 1179 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/html/R.css
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/Meta/
--rw-r--r-- root/root 6836 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/Meta/Rd.rds
--rw-r--r-- root/root 6846 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/Meta/hsearch.rds
--rw-r--r-- root/root 2334 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/Meta/nsInfo.rds
--rw-r--r-- root/root 373 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/Meta/data.rds
--rw-r--r-- root/root 3516 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/Meta/links.rds
--rw-r--r-- root/root 290 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/Meta/vignette.rds
--rw-r--r-- root/root 901 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/Meta/package.rds
--rw-r--r-- root/root 14525 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/NEWS.Rd
--rw-r--r-- root/root 799 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/DESCRIPTION
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/libs/
--rw-r--r-- root/root 72736 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/libs/vegan.so
--rw-r--r-- root/root 9782 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/INDEX
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/
--rw-r--r-- root/root 176311 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/intro-vegan.pdf
--rw-r--r-- root/root 26327 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/decision-vegan.Rnw
--rw-r--r-- root/root 5746 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/intro-vegan.R
--rw-r--r-- root/root 2035 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/index.html
--rw-r--r-- root/root 62541 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/partitioning.pdf
--rw-r--r-- root/root 15100 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/NEWS.html
--rw-r--r-- root/root 307763 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/diversity-vegan.pdf
--rw-r--r-- root/root 135618 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/FAQ-vegan.pdf
--rw-r--r-- root/root 7657 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/diversity-vegan.R
--rw-r--r-- root/root 4412 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/decision-vegan.R
--rw-r--r-- root/root 288747 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/decision-vegan.pdf
--rw-r--r-- root/root 28756 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/diversity-vegan.Rnw
--rw-r--r-- root/root 15047 2012-03-19 13:17 ./usr/lib/R/site-library/vegan/doc/intro-vegan.Rnw
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/share/doc/r-cran-vegan/
--rw-r--r-- root/root 20520 2012-03-19 13:17 ./usr/share/doc/r-cran-vegan/copyright
--rw-r--r-- root/root 449 2012-03-19 13:17 ./usr/share/doc/r-cran-vegan/changelog.Debian.gz
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+drwxr-xr-x root/root 0 2013-04-08 13:21 ./usr/lib/R/
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+drwxr-xr-x root/root 0 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/
+-rw-r--r-- root/root 181136 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/ChangeLog
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+-rw-r--r-- root/root 1056 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/R/vegan
+-rw-r--r-- root/root 6221 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/R/vegan.rdx
+-rw-r--r-- root/root 311805 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/R/vegan.rdb
+drwxr-xr-x root/root 0 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/help/
+-rw-r--r-- root/root 10739 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/help/AnIndex
+-rw-r--r-- root/root 3493 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/help/aliases.rds
+-rw-r--r-- root/root 946 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/help/paths.rds
+-rw-r--r-- root/root 2488 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/help/vegan.rdx
+-rw-r--r-- root/root 799385 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/help/vegan.rdb
+-rw-r--r-- root/root 94769 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/ONEWS
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+-rw-r--r-- root/root 801 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/dune.taxon.rda
+-rw-r--r-- root/root 2062 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/mite.rda
+-rw-r--r-- root/root 464 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/dune.env.rda
+-rw-r--r-- root/root 418 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/mite.xy.rda
+-rw-r--r-- root/root 2102 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/varespec.rda
+-rw-r--r-- root/root 12316 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/mite.pcnm.rda
+-rw-r--r-- root/root 830 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/sipoo.rda
+-rw-r--r-- root/root 729 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/dune.rda
+-rw-r--r-- root/root 8093 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/BCI.rda
+-rw-r--r-- root/root 1187 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/varechem.rda
+-rw-r--r-- root/root 14208 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/pyrifos.rda
+-rw-r--r-- root/root 1210 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/data/mite.env.rda
+-rw-r--r-- root/root 12402 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/NAMESPACE
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+-rw-r--r-- root/root 65716 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/html/00Index.html
+-rw-r--r-- root/root 1179 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/html/R.css
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+-rw-r--r-- root/root 7021 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/Meta/Rd.rds
+-rw-r--r-- root/root 7055 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/Meta/hsearch.rds
+-rw-r--r-- root/root 2424 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/Meta/nsInfo.rds
+-rw-r--r-- root/root 371 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/Meta/data.rds
+-rw-r--r-- root/root 3685 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/Meta/links.rds
+-rw-r--r-- root/root 288 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/Meta/vignette.rds
+-rw-r--r-- root/root 908 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/Meta/package.rds
+-rw-r--r-- root/root 29011 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/NEWS.Rd
+-rw-r--r-- root/root 817 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/DESCRIPTION
+drwxr-xr-x root/root 0 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/libs/
+-rw-r--r-- root/root 60528 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/libs/vegan.so
+-rw-r--r-- root/root 9887 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/INDEX
+drwxr-xr-x root/root 0 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/
+-rw-r--r-- root/root 169289 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/intro-vegan.pdf
+-rw-r--r-- root/root 26327 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/decision-vegan.Rnw
+-rw-r--r-- root/root 5746 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/intro-vegan.R
+-rw-r--r-- root/root 2515 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/index.html
+-rw-r--r-- root/root 62541 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/partitioning.pdf
+-rw-r--r-- root/root 29860 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/NEWS.html
+-rw-r--r-- root/root 308847 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/diversity-vegan.pdf
+-rw-r--r-- root/root 146861 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/FAQ-vegan.pdf
+-rw-r--r-- root/root 7657 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/diversity-vegan.R
+-rw-r--r-- root/root 4412 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/decision-vegan.R
+-rw-r--r-- root/root 281477 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/decision-vegan.pdf
+-rw-r--r-- root/root 28753 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/diversity-vegan.Rnw
+-rw-r--r-- root/root 15056 2013-04-08 13:21 ./usr/lib/R/site-library/vegan/doc/intro-vegan.Rnw
+drwxr-xr-x root/root 0 2013-04-08 13:21 ./usr/share/
+drwxr-xr-x root/root 0 2013-04-08 13:21 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-04-08 13:21 ./usr/share/doc/r-cran-vegan/
+-rw-r--r-- root/root 20520 2013-04-08 13:20 ./usr/share/doc/r-cran-vegan/copyright
+-rw-r--r-- root/root 621 2013-04-08 13:20 ./usr/share/doc/r-cran-vegan/changelog.Debian.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -816,9 +875,9 @@ drwxr-xr-x root/root 0 2012-03-19 13:17 ./usr/share/doc/r-cran-vegan/
lintian
───────
-Subroutine IO::Socket::INET6::sockaddr_in6 redefined at /usr/share/perl/5.14/Exporter.pm line 67.
- at /usr/share/perl5/IO/Socket/INET6.pm line 21
I: r-cran-vegan source: missing-debian-source-format
+W: r-cran-vegan: hardening-no-relro usr/lib/R/site-library/vegan/libs/vegan.so
+W: r-cran-vegan: hardening-no-fortify-functions usr/lib/R/site-library/vegan/libs/vegan.so
P: r-cran-vegan: no-upstream-changelog
I: Lintian run was successful.
@@ -834,19 +893,21 @@ Not cleaning session: cloned chroot in use
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: amd64
-Build-Space: 10968
-Build-Time: 16
+Build Architecture: amd64
+Build-Space: 11244
+Build-Time: 14
Distribution: unstable
-Install-Time: 23
-Job: r-cran-vegan_2.0-3-1.dsc
+Host Architecture: amd64
+Install-Time: 20
+Job: r-cran-vegan_2.0-7-1.dsc
Lintian: pass
+Machine Architecture: amd64
Package: r-cran-vegan
-Package-Time: 42
-Source-Version: 2.0-3-1
-Space: 10968
+Package-Time: 39
+Source-Version: 2.0-7-1
+Space: 11244
Status: successful
-Version: 2.0-3-1
+Version: 2.0-7-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120319-1317
-Build needed 00:00:42, 10968k disc space
+Finished at 20130408-1321
+Build needed 00:00:39, 11244k disc space
--
Community Ecology Package for R
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