[med-svn] r13088 - in trunk/packages/R: . r-cran-boolnet r-cran-boolnet/trunk r-cran-boolnet/trunk/debian r-cran-boolnet/trunk/debian/source

Ivo Maintz ivomaintz-guest at alioth.debian.org
Sun Feb 24 15:16:15 UTC 2013


Author: ivomaintz-guest
Date: 2013-02-24 15:16:15 +0000 (Sun, 24 Feb 2013)
New Revision: 13088

Added:
   trunk/packages/R/r-cran-boolnet/
   trunk/packages/R/r-cran-boolnet/trunk/
   trunk/packages/R/r-cran-boolnet/trunk/debian/
   trunk/packages/R/r-cran-boolnet/trunk/debian/changelog
   trunk/packages/R/r-cran-boolnet/trunk/debian/compat
   trunk/packages/R/r-cran-boolnet/trunk/debian/control
   trunk/packages/R/r-cran-boolnet/trunk/debian/copyright
   trunk/packages/R/r-cran-boolnet/trunk/debian/rules
   trunk/packages/R/r-cran-boolnet/trunk/debian/source/
   trunk/packages/R/r-cran-boolnet/trunk/debian/source/format
   trunk/packages/R/r-cran-boolnet/trunk/debian/upstream
   trunk/packages/R/r-cran-boolnet/trunk/debian/watch
Log:
Initial release



Added: trunk/packages/R/r-cran-boolnet/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-cran-boolnet/trunk/debian/changelog	                        (rev 0)
+++ trunk/packages/R/r-cran-boolnet/trunk/debian/changelog	2013-02-24 15:16:15 UTC (rev 13088)
@@ -0,0 +1,5 @@
+boolnet (1.60-1) UNRELEASED; urgency=low
+
+  * Initian release (Closes: #701486)
+
+ -- Ivo Maintz <ivo at maintz.de>  Thu, 14 Feb 2013 17:34:10 +0100

Added: trunk/packages/R/r-cran-boolnet/trunk/debian/compat
===================================================================
--- trunk/packages/R/r-cran-boolnet/trunk/debian/compat	                        (rev 0)
+++ trunk/packages/R/r-cran-boolnet/trunk/debian/compat	2013-02-24 15:16:15 UTC (rev 13088)
@@ -0,0 +1 @@
+9

Added: trunk/packages/R/r-cran-boolnet/trunk/debian/control
===================================================================
--- trunk/packages/R/r-cran-boolnet/trunk/debian/control	                        (rev 0)
+++ trunk/packages/R/r-cran-boolnet/trunk/debian/control	2013-02-24 15:16:15 UTC (rev 13088)
@@ -0,0 +1,20 @@
+Source: boolnet
+Section: gnu-r
+Priority: extra
+Maintainer: Ivo Maintz <ivo at maintz.de>
+Build-Depends: debhelper (>= 9),
+ r-base-dev,
+ cdbs,
+ dpkg-dev (>= 1.16.1~)
+Standards-Version: 3.9.3
+Homepage: http://www.informatik.uni-ulm.de/ni/mitarbeiter/HKestler/boolnet/
+
+Package: r-cran-boolnet
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}, ${R-Depends},
+ r-base
+Recommends: libigraph0, r-cran-xml
+Description: tools for assembling, analyzing and visualizing Boolean networks
+ BoolNet is an R package that provides tools for assembling, analyzing and visu-
+ alizing synchronous and asynchronous Boolean networks as well as probabilistic
+ Boolean networks.

Added: trunk/packages/R/r-cran-boolnet/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-cran-boolnet/trunk/debian/copyright	                        (rev 0)
+++ trunk/packages/R/r-cran-boolnet/trunk/debian/copyright	2013-02-24 15:16:15 UTC (rev 13088)
@@ -0,0 +1,24 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: boolnet
+Source: http://cran.r-project.org/web/packages/BoolNet/index.html
+
+Files: *
+Copyright: 2012 Hans A. Kestler <hans.kestler at uni-ulm.de>
+           2012 Christoph Muessel
+           2012 Martin Hopfensitz
+License: Artistic-1.0
+
+Files: debian/*
+Copyright: 2013 Ivo Maintz <ivo at maintz.de>
+License: Artistic-1.0
+
+License: Artistic-1.0
+ This program is free software; you can redistribute it and/or modify it
+ under the terms of the "Artistic License" which comes with Debian.
+ .
+ THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
+ WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES
+ OF MERCHANTIBILITY AND FITNESS FOR A PARTICULAR PURPOSE.
+ .
+ On Debian systems, the complete text of the Artistic License
+ can be found in "/usr/share/common-licenses/Artistic".

Added: trunk/packages/R/r-cran-boolnet/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-cran-boolnet/trunk/debian/rules	                        (rev 0)
+++ trunk/packages/R/r-cran-boolnet/trunk/debian/rules	2013-02-24 15:16:15 UTC (rev 13088)
@@ -0,0 +1,13 @@
+#!/usr/bin/make -f
+
+export DEB_BUILD_MAINT_OPTIONS = hardening=+all
+DPKG_EXPORT_BUILDFLAGS = 1
+include /usr/share/dpkg/buildflags.mk
+
+include /usr/share/R/debian/r-cran.mk
+
+get-orig-source:
+	uscan --force-download --rename --verbose
+
+install/$(package)::
+	find debian/$(package)/ -type f -exec chmod 644 {} +


Property changes on: trunk/packages/R/r-cran-boolnet/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
   + *

Added: trunk/packages/R/r-cran-boolnet/trunk/debian/source/format
===================================================================
--- trunk/packages/R/r-cran-boolnet/trunk/debian/source/format	                        (rev 0)
+++ trunk/packages/R/r-cran-boolnet/trunk/debian/source/format	2013-02-24 15:16:15 UTC (rev 13088)
@@ -0,0 +1 @@
+3.0 (quilt)

Added: trunk/packages/R/r-cran-boolnet/trunk/debian/upstream
===================================================================
--- trunk/packages/R/r-cran-boolnet/trunk/debian/upstream	                        (rev 0)
+++ trunk/packages/R/r-cran-boolnet/trunk/debian/upstream	2013-02-24 15:16:15 UTC (rev 13088)
@@ -0,0 +1,14 @@
+Arcive: CRAN
+Contact: Hans A. Kestler <hans.kestler at uni-ulm.de>
+Name: boolnet
+Reference:
+  Author: Christoph Muessel, Martin Hopfensitz and Hans A. Kestler
+  Title: "BoolNet -- an R package for generation, reconstruction and analysis of Boolean networks"
+  Journal: Bioinformatics
+  Volume: 26
+  Number: 6
+  Pages: 1378--1380
+  Year: 2010
+  DOI: 10.1093/bioinformatics/btq124
+  URL: http://bioinformatics.oxfordjournals.org/content/26/10/1378
+  eprint: http://bioinformatics.oxfordjournals.org/content/26/10/1378.full.pdf+html

Added: trunk/packages/R/r-cran-boolnet/trunk/debian/watch
===================================================================
--- trunk/packages/R/r-cran-boolnet/trunk/debian/watch	                        (rev 0)
+++ trunk/packages/R/r-cran-boolnet/trunk/debian/watch	2013-02-24 15:16:15 UTC (rev 13088)
@@ -0,0 +1,2 @@
+version=3
+http://cran.r-project.org/src/contrib/[Bb][Oo][Oo][Ll][Nn][Ee][Tt]_([\d.-]*)\.tar.gz




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