[med-svn] r13506 - in trunk/packages/R/r-cran-haplo.stats/tags: . 1.6.3-1/debian
Charles Plessy
plessy at alioth.debian.org
Mon May 6 07:39:14 UTC 2013
Author: plessy
Date: 2013-05-06 07:39:14 +0000 (Mon, 06 May 2013)
New Revision: 13506
Added:
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/README.test
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/changelog
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/compat
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/control
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/copyright
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/rules
Removed:
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/README.Debian
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/changelog
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/compat
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/control
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/copyright
trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/rules
Log:
[svn-buildpackage] Tagging r-cran-haplo.stats 1.6.3-1
Deleted: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/README.Debian
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/trunk/debian/README.Debian 2013-05-05 23:17:13 UTC (rev 13495)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/README.Debian 2013-05-06 07:39:14 UTC (rev 13506)
@@ -1,5 +0,0 @@
-Notes on how this package can be tested.
-────────────────────────────────────────
-
-This package can be tested by loading it into R with the command
-‘library(haplo.stats)’ in order to confirm its integrity.
Copied: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/README.test (from rev 13503, trunk/packages/R/r-cran-haplo.stats/trunk/debian/README.test)
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/README.test (rev 0)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/README.test 2013-05-06 07:39:14 UTC (rev 13506)
@@ -0,0 +1,5 @@
+Notes on how this package can be tested.
+────────────────────────────────────────
+
+This package can be tested by loading it into R with the command
+‘library(haplo.stats)’ in order to confirm its integrity.
Deleted: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/changelog
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/trunk/debian/changelog 2013-05-05 23:17:13 UTC (rev 13495)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/changelog 2013-05-06 07:39:14 UTC (rev 13506)
@@ -1,74 +0,0 @@
-r-cran-haplo.stats (1.5.5-1) unstable; urgency=low
-
- * New upstream version
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - Build-Depends: r-base-dev (>= 2.14.2~20120222) which is supporting
- R:Depends substitution variable
- * debian/rules: Remove R:Depends substitution variable which isn now
- included in /usr/share/R/debian/r-cran.mk
- * debian/copyright: Fixed DEP5 issues using
- cme fix dpkg-copyright
- * debian/docs -> debian/links: Symlink to Manual rather than copying it
- * debian/doc_source: Removed because now part of upstream source
-
- -- Andreas Tille <tille at debian.org> Tue, 28 Feb 2012 09:28:22 +0100
-
-r-cran-haplo.stats (1.5.2-1) unstable; urgency=low
-
- [ Charles Plessy ]
- * debian/upstream-metadata.yaml -> debian/upstream
-
- [ Andreas Tille ]
- * New upstream version
- * debian/control:
- - Standards-Version: 3.9.2
- - Fixed Vcs-Browser
- - Depends: ${R:Depends}
- * debhelper 8 (control+compat)
- * debian/source/format: 3.0 (quilt)
- * debian/rules: use usual R:depends variable substitution
- * debian/lintian-overrides: do not warn about duplicate license
- * debian/copyright: DEP5
- * debian/doc_source/manualHaploStats.Rnw: Source for user
- manual provided by upstream
- Closes: #655439
- * debian/docs: Install user manual
- * debian/doc-base: Doc-base control file
- * debian/README.Debian: Hint how to test the package
-
- -- Andreas Tille <tille at debian.org> Fri, 10 Feb 2012 15:54:27 +0100
-
-r-cran-haplo.stats (1.4.4-1) unstable; urgency=low
-
- * New upstream release (documentation update).
- * Updated Standards-Version to reflect conformance with Policy 3.8.3
- (debian/control, no changes needed).
- * Added various informations in debian/upstream-metadata.yaml.
-
- -- Charles Plessy <plessy at debian.org> Wed, 21 Oct 2009 13:48:31 +0900
-
-r-cran-haplo.stats (1.4.3-1) unstable; urgency=low
-
- * New upstream release.
- * debian/control:
- - Added myself to the Uploaders.
- - Changed section to ‘gnu-r’ and incremented Standards-Version to to
- reflect conformance with the Policy 3.8.2.
- - Use Debhelper 7 (debian/compat).
- * Refreshed debian/copyright.
-
- -- Charles Plessy <plessy at debian.org> Wed, 08 Jul 2009 13:36:28 +0900
-
-r-cran-haplo.stats (1.3.8-2) unstable; urgency=low
-
- * Following Dirk's request to remove him from the uploaders list.
- * debian/control: Better compliance with 3.8.0 policy.
-
- -- Steffen Moeller <moeller at debian.org> Thu, 15 Jan 2009 14:39:39 +0100
-
-r-cran-haplo.stats (1.3.8-1) unstable; urgency=low
-
- * Initial release (closes: #492122).
-
- -- Steffen Moeller <moeller at debian.org> Wed, 23 Jul 2008 18:27:42 +0200
Copied: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/changelog (from rev 13505, trunk/packages/R/r-cran-haplo.stats/trunk/debian/changelog)
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/changelog (rev 0)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/changelog 2013-05-06 07:39:14 UTC (rev 13506)
@@ -0,0 +1,88 @@
+r-cran-haplo.stats (1.6.3-1) unstable; urgency=low
+
+ * Team upload.
+ * New upstream version.
+ * Depend on R 2.15 according to DESCRIPTION.
+ * Normalised VCS URLs following Lintian's standard.
+ * Using Debhelper 9.
+ * Normalised debian/control with config-model-edit.
+ * Removed myself from Uploaders.
+ * Renamed debian/README.Debian debian/README.test.
+ * Conforms with Policy 3.9.4.
+
+ -- Charles Plessy <plessy at debian.org> Mon, 06 May 2013 16:08:15 +0900
+
+r-cran-haplo.stats (1.5.5-1) unstable; urgency=low
+
+ * New upstream version
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - Build-Depends: r-base-dev (>= 2.14.2~20120222) which is supporting
+ R:Depends substitution variable
+ * debian/rules: Remove R:Depends substitution variable which isn now
+ included in /usr/share/R/debian/r-cran.mk
+ * debian/copyright: Fixed DEP5 issues using
+ cme fix dpkg-copyright
+ * debian/docs -> debian/links: Symlink to Manual rather than copying it
+ * debian/doc_source: Removed because now part of upstream source
+
+ -- Andreas Tille <tille at debian.org> Tue, 28 Feb 2012 09:28:22 +0100
+
+r-cran-haplo.stats (1.5.2-1) unstable; urgency=low
+
+ [ Charles Plessy ]
+ * debian/upstream-metadata.yaml -> debian/upstream
+
+ [ Andreas Tille ]
+ * New upstream version
+ * debian/control:
+ - Standards-Version: 3.9.2
+ - Fixed Vcs-Browser
+ - Depends: ${R:Depends}
+ * debhelper 8 (control+compat)
+ * debian/source/format: 3.0 (quilt)
+ * debian/rules: use usual R:depends variable substitution
+ * debian/lintian-overrides: do not warn about duplicate license
+ * debian/copyright: DEP5
+ * debian/doc_source/manualHaploStats.Rnw: Source for user
+ manual provided by upstream
+ Closes: #655439
+ * debian/docs: Install user manual
+ * debian/doc-base: Doc-base control file
+ * debian/README.Debian: Hint how to test the package
+
+ -- Andreas Tille <tille at debian.org> Fri, 10 Feb 2012 15:54:27 +0100
+
+r-cran-haplo.stats (1.4.4-1) unstable; urgency=low
+
+ * New upstream release (documentation update).
+ * Updated Standards-Version to reflect conformance with Policy 3.8.3
+ (debian/control, no changes needed).
+ * Added various informations in debian/upstream-metadata.yaml.
+
+ -- Charles Plessy <plessy at debian.org> Wed, 21 Oct 2009 13:48:31 +0900
+
+r-cran-haplo.stats (1.4.3-1) unstable; urgency=low
+
+ * New upstream release.
+ * debian/control:
+ - Added myself to the Uploaders.
+ - Changed section to ‘gnu-r’ and incremented Standards-Version to to
+ reflect conformance with the Policy 3.8.2.
+ - Use Debhelper 7 (debian/compat).
+ * Refreshed debian/copyright.
+
+ -- Charles Plessy <plessy at debian.org> Wed, 08 Jul 2009 13:36:28 +0900
+
+r-cran-haplo.stats (1.3.8-2) unstable; urgency=low
+
+ * Following Dirk's request to remove him from the uploaders list.
+ * debian/control: Better compliance with 3.8.0 policy.
+
+ -- Steffen Moeller <moeller at debian.org> Thu, 15 Jan 2009 14:39:39 +0100
+
+r-cran-haplo.stats (1.3.8-1) unstable; urgency=low
+
+ * Initial release (closes: #492122).
+
+ -- Steffen Moeller <moeller at debian.org> Wed, 23 Jul 2008 18:27:42 +0200
Deleted: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/compat
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/trunk/debian/compat 2013-05-05 23:17:13 UTC (rev 13495)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/compat 2013-05-06 07:39:14 UTC (rev 13506)
@@ -1 +0,0 @@
-8
Copied: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/compat (from rev 13499, trunk/packages/R/r-cran-haplo.stats/trunk/debian/compat)
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/compat (rev 0)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/compat 2013-05-06 07:39:14 UTC (rev 13506)
@@ -0,0 +1 @@
+9
Deleted: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/control
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/trunk/debian/control 2013-05-05 23:17:13 UTC (rev 13495)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/control 2013-05-06 07:39:14 UTC (rev 13506)
@@ -1,23 +0,0 @@
-Source: r-cran-haplo.stats
-Section: gnu-r
-Priority: optional
-Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Steffen Moeller <moeller at debian.org>,
- Charles Plessy <plessy at debian.org>,
- Andreas Tille <tille at debian.org>
-Build-Depends: debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
-Standards-Version: 3.9.3
-Homepage: http://cran.r-project.org/web/packages/haplo.stats
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-cran-haplo.stats/trunk
-Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/R/r-cran-haplo.stats/trunk/
-
-Package: r-cran-haplo.stats
-Architecture: any
-Depends: ${shlibs:Depends}, ${R:Depends}
-Description: GNU R package for haplotype analysis
- The package provides routines for the GNU R statistics environment
- for statistical Analysis of indirectly measured Haplotypes with Traits
- and Covariates when Linkage Phase is Ambiguous. The statistical methods
- assume that all subjects are unrelated and that haplotypes are ambiguous
- (due to unknown linkage phase of the genetic markers). The main functions
- are: haplo.em, haplo.glm, haplo.score, haplo.power, and seqhap.
Copied: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/control (from rev 13504, trunk/packages/R/r-cran-haplo.stats/trunk/debian/control)
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/control (rev 0)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/control 2013-05-06 07:39:14 UTC (rev 13506)
@@ -0,0 +1,26 @@
+Source: r-cran-haplo.stats
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Steffen Moeller <moeller at debian.org>,
+ Andreas Tille <tille at debian.org>
+Section: gnu-r
+Priority: optional
+Build-Depends: debhelper (>= 9),
+ cdbs,
+ r-base-dev (>= 2.15)
+Standards-Version: 3.9.4
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-cran-haplo.stats/trunk
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-cran-haplo.stats/trunk/
+Homepage: http://cran.r-project.org/web/packages/haplo.stats
+
+Package: r-cran-haplo.stats
+Architecture: any
+Depends: ${shlibs:Depends},
+ ${R:Depends}
+Description: GNU R package for haplotype analysis
+ The package provides routines for the GNU R statistics environment
+ for statistical Analysis of indirectly measured Haplotypes with Traits
+ and Covariates when Linkage Phase is Ambiguous. The statistical methods
+ assume that all subjects are unrelated and that haplotypes are ambiguous
+ (due to unknown linkage phase of the genetic markers). The main functions
+ are: haplo.em, haplo.glm, haplo.score, haplo.power, and seqhap.
+
Deleted: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/copyright
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/trunk/debian/copyright 2013-05-05 23:17:13 UTC (rev 13495)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/copyright 2013-05-06 07:39:14 UTC (rev 13506)
@@ -1,34 +0,0 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
-Upstream-Name: Haplo Stats
-Upstream-Contact: Jason P. Sinnwell <sinnwell.jason at mayo.edu>
-Source: http://cran.r-project.org/src/contrib/
-
-Files: *
-Copyright: 2003-2012 Mayo Foundation for Medical Education and Research
-License: GPL-2+
- This program is free software; you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation; either version 2 of the License, or
- (at your option) any later version.
- .
- This program is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- GNU General Public License for more details.
- .
- You should have received a copy of the GNU General Public License along
- with this program; if not, write to the Free Software Foundation, Inc.,
- 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- .
- For other licensing arrangements, please contact Daniel J. Schaid.
- .
- On a Debian system, the GNU GPL license version 2 is distributed in the file
- ‘/usr/share/common-licenses/GPL-2’.
-
-Files: debian/*
-Copyright: 2008-2012 Steffen Moeller <moeller at debian.org>,
- Charles Plessy <plessy at debian.org>,
- Andreas Tille <tille at debian.org>
-License: GPL-2+
- Same as software itself.
-
Copied: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/copyright (from rev 13496, trunk/packages/R/r-cran-haplo.stats/trunk/debian/copyright)
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/copyright (rev 0)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/copyright 2013-05-06 07:39:14 UTC (rev 13506)
@@ -0,0 +1,34 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: Haplo Stats
+Upstream-Contact: Jason P. Sinnwell <sinnwell.jason at mayo.edu>
+Source: http://cran.r-project.org/src/contrib/haplo.stats_1.6.3.tar.gz
+
+Files: *
+Copyright: 2003-2012 Mayo Foundation for Medical Education and Research
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License along
+ with this program; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ .
+ For other licensing arrangements, please contact Daniel J. Schaid.
+ .
+ On a Debian system, the GNU GPL license version 2 is distributed in the file
+ ‘/usr/share/common-licenses/GPL-2’.
+
+Files: debian/*
+Copyright: 2008-2012 Steffen Moeller <moeller at debian.org>,
+ Charles Plessy <plessy at debian.org>,
+ Andreas Tille <tille at debian.org>
+License: GPL-2+
+ Same as software itself.
+
Deleted: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/rules
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/trunk/debian/rules 2013-05-05 23:17:13 UTC (rev 13495)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/rules 2013-05-06 07:39:14 UTC (rev 13506)
@@ -1,9 +0,0 @@
-#!/usr/bin/make -f
-# -*- makefile -*-
-# debian/rules file for the Debian/GNU Linux r-cran-haplo.stats package
-# Copyright 2012 by Andreas Tille <tille at debian.org>
-# GPL
-
-DEB_COMPRESS_EXCLUDE_ALL := .pdf
-
-include /usr/share/R/debian/r-cran.mk
Copied: trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/rules (from rev 13502, trunk/packages/R/r-cran-haplo.stats/trunk/debian/rules)
===================================================================
--- trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/rules (rev 0)
+++ trunk/packages/R/r-cran-haplo.stats/tags/1.6.3-1/debian/rules 2013-05-06 07:39:14 UTC (rev 13506)
@@ -0,0 +1,5 @@
+#!/usr/bin/make -f
+
+DEB_COMPRESS_EXCLUDE_ALL := .pdf
+
+include /usr/share/R/debian/r-cran.mk
More information about the debian-med-commit
mailing list