[med-svn] r14716 - trunk/packages/python-biopython/trunk/debian
Philipp Benner
philipp at alioth.debian.org
Sun Sep 15 19:29:11 UTC 2013
Author: philipp
Date: 2013-09-15 19:29:11 +0000 (Sun, 15 Sep 2013)
New Revision: 14716
Added:
trunk/packages/python-biopython/trunk/debian/python-biopython-sql.install
trunk/packages/python-biopython/trunk/debian/python-biopython.install
Removed:
trunk/packages/python-biopython/trunk/debian/python-biopython-sql.files
trunk/packages/python-biopython/trunk/debian/python-biopython.files
Modified:
trunk/packages/python-biopython/trunk/debian/changelog
trunk/packages/python-biopython/trunk/debian/control
trunk/packages/python-biopython/trunk/debian/rules
Log:
python-biopython: release 1.62-1
Modified: trunk/packages/python-biopython/trunk/debian/changelog
===================================================================
--- trunk/packages/python-biopython/trunk/debian/changelog 2013-09-15 05:08:14 UTC (rev 14715)
+++ trunk/packages/python-biopython/trunk/debian/changelog 2013-09-15 19:29:11 UTC (rev 14716)
@@ -1,3 +1,10 @@
+python-biopython (1.62-1) unstable; urgency=low
+
+ * New upstream release
+ * Using CDBS to build the package
+
+ -- Philipp Benner <philipp at debian.org> Sun, 15 Sep 2013 16:36:26 +0200
+
python-biopython (1.61-1) unstable; urgency=low
[ Andreas Tille ]
Modified: trunk/packages/python-biopython/trunk/debian/control
===================================================================
--- trunk/packages/python-biopython/trunk/debian/control 2013-09-15 05:08:14 UTC (rev 14715)
+++ trunk/packages/python-biopython/trunk/debian/control 2013-09-15 19:29:11 UTC (rev 14716)
@@ -5,7 +5,7 @@
Uploaders: Philipp Benner <philipp at debian.org>,
Charles Plessy <plessy at debian.org>,
Andreas Tille <tille at debian.org>
-Build-Depends: debhelper (>= 9), dpkg-dev (>= 1.16.1~), python-all (>= 2.6.6-3~), python-all-dev, flex,
+Build-Depends: debhelper (>= 9), dpkg-dev (>= 1.16.1~), cdbs (>= 0.4.90~), python-all (>= 2.6.6-3~), python-all-dev, flex,
python-reportlab, python-numpy,
# For the purpose of the tests
python-mysqldb, wise
Deleted: trunk/packages/python-biopython/trunk/debian/python-biopython-sql.files
===================================================================
--- trunk/packages/python-biopython/trunk/debian/python-biopython-sql.files 2013-09-15 05:08:14 UTC (rev 14715)
+++ trunk/packages/python-biopython/trunk/debian/python-biopython-sql.files 2013-09-15 19:29:11 UTC (rev 14716)
@@ -1 +0,0 @@
-usr/lib/python*/*-packages/BioSQL
Copied: trunk/packages/python-biopython/trunk/debian/python-biopython-sql.install (from rev 14715, trunk/packages/python-biopython/trunk/debian/python-biopython-sql.files)
===================================================================
--- trunk/packages/python-biopython/trunk/debian/python-biopython-sql.install (rev 0)
+++ trunk/packages/python-biopython/trunk/debian/python-biopython-sql.install 2013-09-15 19:29:11 UTC (rev 14716)
@@ -0,0 +1 @@
+usr/lib/python*/*-packages/BioSQL
Deleted: trunk/packages/python-biopython/trunk/debian/python-biopython.files
===================================================================
--- trunk/packages/python-biopython/trunk/debian/python-biopython.files 2013-09-15 05:08:14 UTC (rev 14715)
+++ trunk/packages/python-biopython/trunk/debian/python-biopython.files 2013-09-15 19:29:11 UTC (rev 14716)
@@ -1 +0,0 @@
-usr/lib/python*/*-packages/Bio
Copied: trunk/packages/python-biopython/trunk/debian/python-biopython.install (from rev 14715, trunk/packages/python-biopython/trunk/debian/python-biopython.files)
===================================================================
--- trunk/packages/python-biopython/trunk/debian/python-biopython.install (rev 0)
+++ trunk/packages/python-biopython/trunk/debian/python-biopython.install 2013-09-15 19:29:11 UTC (rev 14716)
@@ -0,0 +1 @@
+usr/lib/python*/*-packages/Bio
Modified: trunk/packages/python-biopython/trunk/debian/rules
===================================================================
--- trunk/packages/python-biopython/trunk/debian/rules 2013-09-15 05:08:14 UTC (rev 14715)
+++ trunk/packages/python-biopython/trunk/debian/rules 2013-09-15 19:29:11 UTC (rev 14716)
@@ -4,93 +4,8 @@
DPKG_EXPORT_BUILDFLAGS = 1
include /usr/share/dpkg/buildflags.mk
-PWD := $(shell pwd)
-PYDEF := $(shell pyversions -d)
-PYVERS := $(shell pyversions -r)
+include /usr/share/cdbs/1/rules/debhelper.mk
+include /usr/share/cdbs/1/class/python-distutils.mk
-build: build-arch build-indep
-build-arch: build-stamp
-build-indep: build-stamp
-build-stamp: $(PYVERS:%=build-%)
- touch build-stamp
-build-python%:
- echo $(DEB_HOST_ARCH)
- yes | python$* setup.py build
-
-install: $(PYVERS:%=install-%)
-install-python%:
- dh_testdir
- dh_testroot
-
- yes | python$* setup.py install --root $(CURDIR)/debian/python$*-tmp --install-layout=deb
-
- dh_movefiles -ppython-biopython \
- -ppython-biopython-sql \
- --sourcedir=debian/python$*-tmp
-
-clean: $(PYVERS:%=clean-%)
- dh_testdir
- dh_testroot
-
- dh_clean
-
- $(RM) build-stamp
-
-# fix bugs in setup.py
- $(RM) Tests/*.pyc
- $(RM) Tests/Graphics/*.eps
- $(RM) Tests/Graphics/*.pdf
- $(RM) Tests/dump
- $(RM) Tests/NeuralNetwork/patternio.txt
- $(RM) -r Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa.idx
-
- $(RM) -r build
-
-clean-python%:
- dh_testdir
- dh_testroot
-
- python$* setup.py clean
-
- $(RM) -r debian/python$*-tmp
-
-binary-indep: build install
- dh_testdir
- dh_testroot
-
- dh_installdocs -i
- dh_installchangelogs -i
- dh_fixperms -i
- dh_compress -i
- dh_python2 -i
- dh_numpy -i
- dh_gencontrol -i
- dh_md5sums -i
- dh_installdeb -i
- dh_builddeb -i
-
-binary-arch: build install
- dh_testdir
- dh_testroot
-
- dh_installdocs -a
- dh_installchangelogs -a
- dh_fixperms -a
- dh_compress -a
-ifeq (,$(findstring nostrip,$(DEB_BUILD_OPTIONS)))
- dh_strip -a
-endif
- dh_python2 -a
- dh_numpy -a
- dh_shlibdeps -a
- dh_gencontrol -a
- dh_md5sums -a
- dh_installdeb -a
- dh_builddeb -a
-
-test:
- python$* setup.py test
-
-binary: binary-indep binary-arch test
-
-.PHONY: clean build install binary binary-indep binary-arch
+binary-post-install/python-biopython::
+ dh_numpy -ppython-biopython
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