[med-svn] [arden] 01/01: fix move of module core to arden.core

[Olivier Sallou]

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osallou pushed a commit to branch master
in repository arden.

commit 2927173fc23a38e589fa547ba9801f492a00fa24
Author: Olivier Sallou <olivier.sallou at debian.org>
Date:   Fri Feb 7 14:39:30 2014 +0100

    fix move of module core to arden.core
---
 debian/control                    |  1 +
 debian/patches/move_core_to_arden | 26 ++++++++++++++++++++++++++
 debian/patches/series             |  1 +
 debian/rules                      |  5 +++++
 4 files changed, 33 insertions(+)

diff --git a/debian/control b/debian/control
index 5803a20..20698c3 100644
--- a/debian/control
+++ b/debian/control
@@ -18,6 +18,7 @@ Depends: ${shlibs:Depends},
          python-scipy,
          python-numpy,
          python-htseq,
+         python-matplotlib,
          python-mpmath
 Description: specificity control for read alignments using an artificial reference
  ARDEN (Artificial Reference Driven Estimation of false positives in NGS
diff --git a/debian/patches/move_core_to_arden b/debian/patches/move_core_to_arden
new file mode 100644
index 0000000..bef685e
--- /dev/null
+++ b/debian/patches/move_core_to_arden
@@ -0,0 +1,26 @@
+Subject: core module is too generic
+Description: upstream puts python module core, too generic.
+ Move pakcage to arden.core
+Author: Olivier Sallou <osallou at debian.org>
+Last-Updated: 2014-07-02
+Forwarded: no
+--- a/arden-analyze
++++ b/arden-analyze
+@@ -46,8 +46,8 @@
+ import os
+ 
+ 
+-from core import  AnalyseMapping as AM
+-from core import   PlotData as PD
++from arden.core import  AnalyseMapping as AM
++from arden.core import   PlotData as PD
+ 
+ 
+ 
+@@ -274,4 +274,4 @@
+     main()
+     b = time.time()
+     print ("Finished!")
+-    print ("Done in %0.2f seconds!" % (b-a))
+\ No newline at end of file
++    print ("Done in %0.2f seconds!" % (b-a))
diff --git a/debian/patches/series b/debian/patches/series
new file mode 100644
index 0000000..a96c0c7
--- /dev/null
+++ b/debian/patches/series
@@ -0,0 +1 @@
+move_core_to_arden
diff --git a/debian/rules b/debian/rules
index 70a032c..7f1cd64 100755
--- a/debian/rules
+++ b/debian/rules
@@ -19,5 +19,10 @@
 %:
 	dh $@ --with python2
 
+override_dh_install:
+	dh_install
+	touch debian/arden/usr/share/pyshared/arden/__init__.py
+	touch debian/arden/usr/share/pyshared/arden/core/__init__.py
+
 #get-orig-source:
 #	. debian/get-orig-source

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