[med-svn] [Debian Wiki] Update of "DebianMed/Meeting/Aberdeen2014" by Luca Clivio

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Mon Jan 27 17:01:54 UTC 2014


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The "DebianMed/Meeting/Aberdeen2014" page has been changed by Luca Clivio:
https://wiki.debian.org/DebianMed/Meeting/Aberdeen2014?action=diff&rev1=96&rev2=97

  ||09:30||Talk about Qlustar, Tony Travis (Minke Informatics)||
  ||10:00||Kristoffer speaks of possibilities of batch upload of package info into the tools registry||
  ||10:30||Coffee break||
- ||11:00||Talk?||
+ ||11:00||Talk about P2Pdb, Luca Clivio. A peer to peer approach to data sharing for clinical trials and translational research||
  ||11:30||Talk?||
  ||12:00||Talk?||
  ||12:30||Talk?||
@@ -122, +122 @@

    * note [Matus]: preliminary brainstorming on this topic has been done by László, Jon Ison, Matúš (+Steffen, Hervé, Bertrand, Kristoffer Rapacki. Notes connected to attributes to annotate are in this section of the [[https://docs.google.com/document/d/19VpzwxZdlz1K4P1q1a-WYZUtiSXwUp2nafM716dzW8I/edit?pli=1#bookmark=id.v415n1pdyfl0|CodefestOntoDoc]]) - Let's get more people on board and decide and make concrete steps in Stonehaven!
   * Development of bioinformatics tools registry and opportunities for synergy with Debian Med, Bio-Linux, Galaxy, Mobyle, ... [Kristoffer, Matúš]
   * Community development, licensing, and potentially packaging of "standards" (incl. ontologies, schemata, ...) - what are the good, sustainable ways? Interested: Matus
-  * p2pDB [Luca] - beyond the web: a peer to peer approach to data sharing for clinical trials and bioinformatics research
+  * p2pDB [Luca] - beyond the web: a peer to peer approach to data sharing for clinical trials and translational research
   * Bioinformatics education on the Raspberry Pi - [[http://eggg.st-andrews.ac.uk/4273pi|4273pi]] [Daniel]
   * Automated creation of [[http://www.docker.io/|Docker]] containers with specific combinations of Debian-Med and external packages using Cloud. Work in progress is [[https://github.com/chapmanb/bcbio-nextgen-vm|bcbio-nextgen-vm]], with a [[https://github.com/chapmanb/bcbio-nextgen/blob/master/Dockerfile|Dockerfile]]. [Brad]
    * [note O. Sallou] might be worth looking at/contributing to build-debian-cloud (python branch). It can be used for the moment to build EC2 or VirtualBox/Vagrant and KMV images. It also supports the addition of plugins.



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