[med-svn] r18501 - in trunk/packages/circos/tags: . 0.67.2-1/debian 0.67.2-1/debian/patches
Olivier Sallou
osallou at moszumanska.debian.org
Fri Nov 21 07:09:18 UTC 2014
Author: osallou
Date: 2014-11-21 07:09:18 +0000 (Fri, 21 Nov 2014)
New Revision: 18501
Added:
trunk/packages/circos/tags/0.67.2-1/
trunk/packages/circos/tags/0.67.2-1/debian/changelog
trunk/packages/circos/tags/0.67.2-1/debian/patches/configpath_add_etc
trunk/packages/circos/tags/0.67.2-1/debian/patches/fix_manpage
Removed:
trunk/packages/circos/tags/0.67.2-1/debian/changelog
trunk/packages/circos/tags/0.67.2-1/debian/patches/configpath_add_etc
trunk/packages/circos/tags/0.67.2-1/debian/patches/fix_manpage
Log:
[svn-buildpackage] Tagging circos 0.67.2-1
Deleted: trunk/packages/circos/tags/0.67.2-1/debian/changelog
===================================================================
--- trunk/packages/circos/trunk/debian/changelog 2014-11-20 22:55:01 UTC (rev 18494)
+++ trunk/packages/circos/tags/0.67.2-1/debian/changelog 2014-11-21 07:09:18 UTC (rev 18501)
@@ -1,69 +0,0 @@
-circos (0.67.1-1) UNRELEASED; urgency=medium
-
- * New upstream release
- * cme fix dpkg-control
- * debhelper 9
- * Depends: libstatistics-basic-perl
- * Add autopkgtest
-
- -- Andreas Tille <tille at debian.org> Sat, 25 Oct 2014 08:45:17 +0200
-
-circos (0.66-1) unstable; urgency=medium
-
- * New usptream release
-
- -- Olivier Sallou <osallou at debian.org> Tue, 29 Apr 2014 08:02:58 +0200
-
-circos (0.64-1) unstable; urgency=low
-
- * New upstream release
-
- -- Olivier Sallou <osallou at debian.org> Mon, 20 May 2013 09:01:27 +0200
-
-circos (0.62.1-1) unstable; urgency=low
-
- * New upstream release
-
- -- Olivier Sallou <osallou at debian.org> Fri, 21 Sep 2012 17:00:12 +0200
-
-circos (0.61-3) unstable; urgency=low
-
- * debian/control: add missing dependency (Closes: #684977).
-
- -- Olivier Sallou <osallou at debian.org> Wed, 15 Aug 2012 12:46:11 +0200
-
-circos (0.61-2) unstable; urgency=low
-
- [ Olivier Sallou ]
- * debian/control:
- - Update description (Closes: #682802).
- - Rename otf-symbols-circos to fonts-circos-symbols to fit the Font
- Packages Naming Policy.
- - Move to Standards 3.9.3
-
- -- Olivier Sallou <osallou at debian.org> Thu, 14 Jun 2012 13:46:15 +0200
-
-circos (0.61-1) unstable; urgency=low
-
- [ Olivier Sallou ]
- * New upstream release
-
- [ Charles Plessy ]
- * renamed debian/upstream-metadata.yaml to debian/upstream
-
- [ Andreas Tille ]
- * debian/upstream: enhanced citation information
-
- -- Olivier Sallou <osallou at debian.org> Thu, 14 Jun 2012 12:56:33 +0200
-
-circos (0.55-2) unstable; urgency=low
-
- * Add pre-depends on dpkg to support xz compression (required for Ubuntu)
-
- -- Olivier Sallou <olivier.sallou at irisa.fr> Wed, 19 Oct 2011 14:16:18 +0200
-
-circos (0.55-1) unstable; urgency=low
-
- * First debian import (Closes: #632174)
-
- -- Olivier Sallou <olivier.sallou at irisa.fr> Wed, 29 Jun 2011 12:04:57 +0200
Copied: trunk/packages/circos/tags/0.67.2-1/debian/changelog (from rev 18496, trunk/packages/circos/trunk/debian/changelog)
===================================================================
--- trunk/packages/circos/tags/0.67.2-1/debian/changelog (rev 0)
+++ trunk/packages/circos/tags/0.67.2-1/debian/changelog 2014-11-21 07:09:18 UTC (rev 18501)
@@ -0,0 +1,71 @@
+circos (0.67.2-1) unstable; urgency=medium
+
+ * New upstream release
+ * cme fix dpkg-control
+ * debhelper 9
+ * Depends: libstatistics-basic-perl
+ * Add autopkgtest
+ [Olivier Sallou]
+ * refresh patches
+
+ -- Andreas Tille <tille at debian.org> Sat, 25 Oct 2014 08:45:17 +0200
+
+circos (0.66-1) unstable; urgency=medium
+
+ * New usptream release
+
+ -- Olivier Sallou <osallou at debian.org> Tue, 29 Apr 2014 08:02:58 +0200
+
+circos (0.64-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Olivier Sallou <osallou at debian.org> Mon, 20 May 2013 09:01:27 +0200
+
+circos (0.62.1-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Olivier Sallou <osallou at debian.org> Fri, 21 Sep 2012 17:00:12 +0200
+
+circos (0.61-3) unstable; urgency=low
+
+ * debian/control: add missing dependency (Closes: #684977).
+
+ -- Olivier Sallou <osallou at debian.org> Wed, 15 Aug 2012 12:46:11 +0200
+
+circos (0.61-2) unstable; urgency=low
+
+ [ Olivier Sallou ]
+ * debian/control:
+ - Update description (Closes: #682802).
+ - Rename otf-symbols-circos to fonts-circos-symbols to fit the Font
+ Packages Naming Policy.
+ - Move to Standards 3.9.3
+
+ -- Olivier Sallou <osallou at debian.org> Thu, 14 Jun 2012 13:46:15 +0200
+
+circos (0.61-1) unstable; urgency=low
+
+ [ Olivier Sallou ]
+ * New upstream release
+
+ [ Charles Plessy ]
+ * renamed debian/upstream-metadata.yaml to debian/upstream
+
+ [ Andreas Tille ]
+ * debian/upstream: enhanced citation information
+
+ -- Olivier Sallou <osallou at debian.org> Thu, 14 Jun 2012 12:56:33 +0200
+
+circos (0.55-2) unstable; urgency=low
+
+ * Add pre-depends on dpkg to support xz compression (required for Ubuntu)
+
+ -- Olivier Sallou <olivier.sallou at irisa.fr> Wed, 19 Oct 2011 14:16:18 +0200
+
+circos (0.55-1) unstable; urgency=low
+
+ * First debian import (Closes: #632174)
+
+ -- Olivier Sallou <olivier.sallou at irisa.fr> Wed, 29 Jun 2011 12:04:57 +0200
Deleted: trunk/packages/circos/tags/0.67.2-1/debian/patches/configpath_add_etc
===================================================================
--- trunk/packages/circos/trunk/debian/patches/configpath_add_etc 2014-11-20 22:55:01 UTC (rev 18494)
+++ trunk/packages/circos/tags/0.67.2-1/debian/patches/configpath_add_etc 2014-11-21 07:09:18 UTC (rev 18501)
@@ -1,33 +0,0 @@
-Description: Add Debian directories in search path
-Author: Olivier Sallou <olivier.sallou at irisa.fr>
-Last-Update: 2012-09-21
-Forwarded: not-needed
---- a/lib/Circos/Configuration.pm
-+++ b/lib/Circos/Configuration.pm
-@@ -707,6 +707,7 @@
- }
-
- my @configpath = (
-+ "/etc/circos",
- dirname($file),
- dirname($file)."/etc",
- "$FindBin::RealBin/etc",
---- a/etc/makehuesteps
-+++ b/etc/makehuesteps
-@@ -1,4 +1,4 @@
--#!/bin/env perl
-+#!/usr/bin/env perl
-
- use strict;
- use Math::Round qw(round);
---- a/lib/Circos/Utils.pm
-+++ b/lib/Circos/Utils.pm
-@@ -498,7 +498,7 @@
- }
-
- # v0.63 added configuration directory to dir_1
-- my @dir_1 = grep($_,getcwd,Circos::Configuration::fetch_conf("configdir"),$FindBin::RealBin);
-+ my @dir_1 = grep($_,getcwd,Circos::Configuration::fetch_conf("configdir"),$FindBin::RealBin,"/usr/share/circos");
- my @dir_2 = qw(. .. ../.. ../../..);
- my @dir_3 = qw(. etc data);
-
Copied: trunk/packages/circos/tags/0.67.2-1/debian/patches/configpath_add_etc (from rev 18495, trunk/packages/circos/trunk/debian/patches/configpath_add_etc)
===================================================================
--- trunk/packages/circos/tags/0.67.2-1/debian/patches/configpath_add_etc (rev 0)
+++ trunk/packages/circos/tags/0.67.2-1/debian/patches/configpath_add_etc 2014-11-21 07:09:18 UTC (rev 18501)
@@ -0,0 +1,39 @@
+Description: Add Debian directories in search path
+Author: Olivier Sallou <olivier.sallou at irisa.fr>
+Last-Update: 2012-09-21
+Forwarded: not-needed
+Index: circos-0.67-2/lib/Circos/Configuration.pm
+===================================================================
+--- circos-0.67-2.orig/lib/Circos/Configuration.pm
++++ circos-0.67-2/lib/Circos/Configuration.pm
+@@ -798,6 +798,7 @@ sub loadconfiguration {
+ }
+
+ my @configpath = (
++ "/etc/circos",
+ dirname($file),
+ dirname($file)."/etc",
+ "$FindBin::RealBin/etc",
+Index: circos-0.67-2/etc/makehuesteps
+===================================================================
+--- circos-0.67-2.orig/etc/makehuesteps
++++ circos-0.67-2/etc/makehuesteps
+@@ -1,4 +1,4 @@
+-#!/bin/env perl
++#!/usr/bin/env perl
+
+ use strict;
+ use Math::Round qw(round);
+Index: circos-0.67-2/lib/Circos/Utils.pm
+===================================================================
+--- circos-0.67-2.orig/lib/Circos/Utils.pm
++++ circos-0.67-2/lib/Circos/Utils.pm
+@@ -610,7 +610,7 @@ sub locate_file {
+ }
+
+ # v0.63 added configuration directory to dir_1
+- my @dir_1 = grep($_,getcwd,Circos::Configuration::fetch_conf("configdir"),$FindBin::RealBin);
++ my @dir_1 = grep($_,getcwd,Circos::Configuration::fetch_conf("configdir"),$FindBin::RealBin,"/usr/share/circos");
+ my @dir_2 = qw(. .. ../.. ../../..);
+ my @dir_3 = qw(. etc data);
+
Deleted: trunk/packages/circos/tags/0.67.2-1/debian/patches/fix_manpage
===================================================================
--- trunk/packages/circos/trunk/debian/patches/fix_manpage 2014-11-20 22:55:01 UTC (rev 18494)
+++ trunk/packages/circos/tags/0.67.2-1/debian/patches/fix_manpage 2014-11-21 07:09:18 UTC (rev 18501)
@@ -1,25 +0,0 @@
-Subject: fix errors from pod2man result
-Description: Perl file used as source for man page contains errors.
-Author: Olivier Sallou <osallou at debian.org>
-Last-Updated: 2013-05-20
-Forwarded: No
---- a/lib/Circos.pm
-+++ b/lib/Circos.pm
-@@ -7,7 +7,7 @@
-
- =head1 NAME
-
--Circos - Circular data visualizations for comparison of genomes, among other things
-+Circos \- Circular data visualizations for comparison of genomes, among other things
-
- =head1 SYNOPSIS
-
-@@ -6879,7 +6879,7 @@
-
- =over
-
--item * Hive plots
-+=item * Hive plots
-
- L<http://www.hiveplot.com>
-
Copied: trunk/packages/circos/tags/0.67.2-1/debian/patches/fix_manpage (from rev 18495, trunk/packages/circos/trunk/debian/patches/fix_manpage)
===================================================================
--- trunk/packages/circos/tags/0.67.2-1/debian/patches/fix_manpage (rev 0)
+++ trunk/packages/circos/tags/0.67.2-1/debian/patches/fix_manpage 2014-11-21 07:09:18 UTC (rev 18501)
@@ -0,0 +1,27 @@
+Subject: fix errors from pod2man result
+Description: Perl file used as source for man page contains errors.
+Author: Olivier Sallou <osallou at debian.org>
+Last-Updated: 2013-05-20
+Forwarded: No
+Index: circos-0.67-2/lib/Circos.pm
+===================================================================
+--- circos-0.67-2.orig/lib/Circos.pm
++++ circos-0.67-2/lib/Circos.pm
+@@ -7,7 +7,7 @@ our $VERSION_DATE = "18 Nov 2014";
+
+ =head1 NAME
+
+-Circos - Circular data visualizations for comparison of genomes, among other things
++Circos \- Circular data visualizations for comparison of genomes, among other things
+
+ =head1 SYNOPSIS
+
+@@ -7111,7 +7111,7 @@ L<http://www.circos.ca/documentation/cou
+
+ =over
+
+-item * Hive plots
++=item * Hive plots
+
+ L<http://www.hiveplot.com>
+
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