[med-svn] [mugsy] 01/02: Do not try to build local code copy uf mummer

[Andreas Tille]

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tille pushed a commit to branch master
in repository mugsy.

commit ac070479db69c75fb19b3b16298b6984d525051f
Author: Andreas Tille <tille at debian.org>
Date:   Wed Apr 15 08:55:40 2015 +0200

    Do not try to build local code copy uf mummer
---
 debian/patches/series                           |  1 +
 debian/patches/use_debian_packaged_mummer.patch | 19 +++++++++++++++++++
 2 files changed, 20 insertions(+)

diff --git a/debian/patches/series b/debian/patches/series
new file mode 100644
index 0000000..cca2a8b
--- /dev/null
+++ b/debian/patches/series
@@ -0,0 +1 @@
+use_debian_packaged_mummer.patch
diff --git a/debian/patches/use_debian_packaged_mummer.patch b/debian/patches/use_debian_packaged_mummer.patch
new file mode 100644
index 0000000..3bd9808
--- /dev/null
+++ b/debian/patches/use_debian_packaged_mummer.patch
@@ -0,0 +1,19 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Updated: Mon, 13 Apr 2015 15:21:26 +0200
+Description: The Debian packaged mummer (>= 3.23~dfsg-3) contains the patches
+ introduced by mugsy - so we do not need to build the own code copy
+
+--- a/Makefile
++++ b/Makefile
+@@ -3,9 +3,9 @@ RELEASE_NAME=mugsy_x86-64-v1r2.3.1
+ INSTALL_DIR=./${RELEASE_NAME}
+ 
+ 
+-all: nucmer synchain_mugsy mugsy_seqan
++all: synchain_mugsy mugsy_seqan
+ 
+-install: mugsy_install mummer_install
++install: mugsy_install
+ 
+ dist:
+ 	tar cvzf ${RELEASE_NAME}.tgz ${INSTALL_DIR}

-- 
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