[med-svn] [mauve] 08/11: Update packaging
Andreas Tille
tille at debian.org
Wed Apr 22 12:07:59 UTC 2015
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository mauve.
commit 43291c9c521f9abca1fcb03bbf5ef1b354c3b0f5
Author: Andreas Tille <tille at debian.org>
Date: Sun Apr 19 06:55:04 2015 +0000
Update packaging
---
debian/README.Debian | 15 +++++----------
debian/changelog | 4 ++--
debian/control | 8 +++++---
debian/copyright | 31 ++++++++++++++-----------------
debian/rules | 19 ++++++++++++++++---
debian/watch | 4 +---
6 files changed, 43 insertions(+), 38 deletions(-)
diff --git a/debian/README.Debian b/debian/README.Debian
index e2e9561..5cc7e5c 100644
--- a/debian/README.Debian
+++ b/debian/README.Debian
@@ -1,12 +1,7 @@
-Mauve for Debian
-----------------
+libMems for Debian
+------------------
-ATTENTION:
-This package build-depends from libclustalw which has some
-license issues and thus can not be distributed by Debian
-for the moment. There are unofficial packages avialable
-from
+This library is packaged as a precondition of the Mauve
+multiple genome alignment package.
- http://people.debian.org/~tille/packages/libclustalw/
-
- -- Andreas Tille <tille at debian.org> Thu, 14 Feb 2008 22:13:45 +0100
+ -- Andreas Tille <tille at debian.org> Fri, 17 Apr 2015 15:38:22 +0200
diff --git a/debian/changelog b/debian/changelog
index 01ec944..e1eea8e 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,5 +1,5 @@
-mauve (2.1.1-1) unstable; urgency=low
+mauve (2.4.0+4734-1) UNRELEASED; urgency=medium
* Initial release (Closes: #??????)
- -- Andreas Tille <tille at debian.org> Thu, 13 Mar 2008 15:16:59 +0100
+ -- Andreas Tille <tille at debian.org> Fri, 17 Apr 2015 15:38:22 +0200
diff --git a/debian/control b/debian/control
index 7ca2878..608865c 100644
--- a/debian/control
+++ b/debian/control
@@ -4,16 +4,18 @@ Uploaders: Andreas Tille <tille at debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 9),
- libmems-1.5-1-dev
+ dh-autoreconf,
+ libmems-1.6-1-dev
Standards-Version: 3.9.6
Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/mauve/
Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/mauve/trunk/
-Homepage: http://darlinglab.org/mauve/mauve.html
+Homepage: http://darlinglab.org/mauve/
Package: mauve
Architecture: any
Section: science
-Depends: ${devlibs:Depends}
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
Description: multiple genome alignment
Mauve is a system for efficiently constructing multiple genome alignments
in the presence of large-scale evolutionary events such as rearrangement
diff --git a/debian/copyright b/debian/copyright
index e97b221..516ac9b 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -1,24 +1,21 @@
-X-Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat
-X-Debianized-By: Andreas Tille <tille at debian.org>
-X-Debinized-Date: Thu, 13 Mar 2008 15:16:59 +0100
-X-Source-Downloaded-From: http://gel.ahabs.wisc.edu/mauve/source/mauve_2.1.1/
-X-Upstream-Author: © 2003, 2004, 2005, 2006, 2007, Aaron Darling -- darling at cs.wisc.edu
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: libMems
+Upstream-Contact: Aaron Darling <darling at cs.wisc.edu>
+Source: http://sourceforge.net/p/mauve/code/HEAD/tree/libMems/trunk/
+
+Files: *
+Copyright: 2003 - 2014 Aaron Darling -- darling at cs.wisc.edu
+License: GPL-2+
Files: debian/*
-Copyright: © 2008, Andreas Tille <tille at debian.org>
+Copyright: 2015 Andreas Tille <tille at debian.org>
+License: GPL-2+
+
License: GPL-2+
This package is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
-
-Files: *
-Copyright: © 2003, 2004, 2005, 2006, 2007, Aaron Darling -- darling at cs.wisc.edu
-
-License: GPL-2
- This package is free software; you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation version 2 of the License.
-
-On Debian systems, the complete text of the licenses can be found in:
-GPL-2 - `/usr/share/common-licenses/GPL-2'
+ .
+ On Debian systems, the complete text of the licenses can be found in:
+ GPL-2 - `/usr/share/common-licenses/GPL-2'
diff --git a/debian/rules b/debian/rules
index 25f4e89..e96fdda 100755
--- a/debian/rules
+++ b/debian/rules
@@ -1,8 +1,21 @@
#!/usr/bin/make -f
-include /usr/share/cdbs/1/rules/patchsys-quilt.mk
-include /usr/share/cdbs/1/rules/debhelper.mk
-include /usr/share/cdbs/1/class/ant.mk
+%:
+ dh $@ --with autoreconf
+
+override_dh_install:
+ dh_install
+ d-shlibmove --commit \
+ --multiarch \
+ --devunversioned \
+ --exclude-la \
+ --movedev debian/tmp/usr/include/* usr/include \
+ --movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/$(DEB_HOST_MULTIARCH)/pkgconfig \
+ debian/tmp/usr/lib/*/*.so
+
+#override_dh_auto_test:
+# echo 'Disable test since some header (gnDNXSource.h) seems to be missing.'
get-orig-source:
. debian/get-orig-source
+
diff --git a/debian/watch b/debian/watch
index 5f508b7..cf22602 100644
--- a/debian/watch
+++ b/debian/watch
@@ -1,3 +1 @@
-version=3
-
-http://gel.ahabs.wisc.edu/mauve/source/mauve_(.*)/mauve-(.*)\.tar\.gz
+# There is no tarball download location, libMuscle is only available in SVN
--
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