[med-svn] [subread] branch master updated (aea4935 -> 1ffde0e)

[Alex Mestiashvili]

This is an automated email from the git hooks/post-receive script.

malex-guest pushed a change to branch master
in repository subread.

      from  aea4935   Upload to unstable
       new  280476f   d/rules: lineup variable definitions
       new  a97503e   Imported Upstream version 1.4.6-p2
       new  7e79701   Merge tag 'upstream/1.4.6-p2'
       new  0329a26   d/changelog: new upstream release
       new  2481468   d/filter.pl: add regex for removeDup man page cleanup  no need in colon for USAGE
       new  1ffde0e   d/changelog: s/UNRELEASED/unstable/

The 6 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
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Summary of changes:
 ._README.txt                 | Bin 442 -> 0 bytes
 debian/changelog             |   7 +++++++
 debian/filter.pl             |   5 +++--
 debian/rules                 |   4 ++--
 doc/._SubreadUsersGuide.pdf  | Bin 337 -> 0 bytes
 doc/SubreadUsersGuide.pdf    | Bin 622657 -> 626083 bytes
 src/core-indel.c             |   1 +
 src/core-interface-aligner.c |  16 ++++++++++++++++
 src/core-interface-subjunc.c |  17 +++++++++++++++++
 src/core-junction.c          |  10 +++-------
 src/core.h                   |   1 +
 src/makefile.version         |   2 +-
 12 files changed, 51 insertions(+), 12 deletions(-)
 delete mode 100644 ._README.txt
 delete mode 100644 doc/._SubreadUsersGuide.pdf
 mode change 100644 => 100755 doc/SubreadUsersGuide.pdf

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