[med-svn] r18728 - trunk/packages/vsearch/trunk/debian

[Andreas Tille]

Author: tille
Date: 2015-02-02 10:47:59 +0000 (Mon, 02 Feb 2015)
New Revision: 18728

Added:
   trunk/packages/vsearch/trunk/debian/vsearch-data.lintian-overrides
   trunk/packages/vsearch/trunk/debian/vsearch.doc-base.manual
   trunk/packages/vsearch/trunk/debian/vsearch.doc-base.readme
Modified:
   trunk/packages/vsearch/trunk/debian/changelog
Log:
Some polishing, doc-base; package is ready for upload so far but waiting for comments on various porters list as well as from Tim


Modified: trunk/packages/vsearch/trunk/debian/changelog
===================================================================
--- trunk/packages/vsearch/trunk/debian/changelog	2015-02-02 10:01:15 UTC (rev 18727)
+++ trunk/packages/vsearch/trunk/debian/changelog	2015-02-02 10:47:59 UTC (rev 18728)
@@ -6,6 +6,9 @@
   * conditional use of -mtune flag
     Closes: #776812
   * Polishing manpage
+  * Lintian override for gzipped data file
+  * debian/upstream/metadata: add some related references (note: currently
+    there is no publication about vsearch itself)
 
  -- Andreas Tille <tille at debian.org>  Mon, 02 Feb 2015 07:40:07 +0100
 

Added: trunk/packages/vsearch/trunk/debian/vsearch-data.lintian-overrides
===================================================================
--- trunk/packages/vsearch/trunk/debian/vsearch-data.lintian-overrides	                        (rev 0)
+++ trunk/packages/vsearch/trunk/debian/vsearch-data.lintian-overrides	2015-02-02 10:47:59 UTC (rev 18728)
@@ -0,0 +1,2 @@
+# This is just a copy from upstream gzipped file which will not change in packaging process
+vsearch-data: package-contains-timestamped-gzip usr/share/doc/vsearch/examples/simm.tar.gz

Added: trunk/packages/vsearch/trunk/debian/vsearch.doc-base.manual
===================================================================
--- trunk/packages/vsearch/trunk/debian/vsearch.doc-base.manual	                        (rev 0)
+++ trunk/packages/vsearch/trunk/debian/vsearch.doc-base.manual	2015-02-02 10:47:59 UTC (rev 18728)
@@ -0,0 +1,11 @@
+Document: vsearch-manual
+Title: vsearch manual as PDF
+Author: Robert C. Edgar
+Abstract: tool for processing metagenomic sequences
+ Open and free 64-bit multithreaded tool for processing metagenomic sequences,
+ including searching, clustering, chimera detection, dereplication, sorting,
+ masking and shuffling
+Section: Science/Biology
+
+Format: pdf
+Files: /usr/share/doc/vsearch/vsearch_manual.pdf.gz

Added: trunk/packages/vsearch/trunk/debian/vsearch.doc-base.readme
===================================================================
--- trunk/packages/vsearch/trunk/debian/vsearch.doc-base.readme	                        (rev 0)
+++ trunk/packages/vsearch/trunk/debian/vsearch.doc-base.readme	2015-02-02 10:47:59 UTC (rev 18728)
@@ -0,0 +1,12 @@
+Document: vsearch-readme
+Title: simple introduction into vsearch
+Author: Robert C. Edgar
+Abstract: tool for processing metagenomic sequences
+ Open and free 64-bit multithreaded tool for processing metagenomic sequences,
+ including searching, clustering, chimera detection, dereplication, sorting,
+ masking and shuffling
+Section: Science/Biology
+
+Format: html
+Index: /usr/share/doc/vsearch/README.html
+Files: /usr/share/doc/vsearch/README.html