[med-svn] [jaligner] 01/01: add ITP #; relax dependencies; add license info

[Michael Crusoe]

This is an automated email from the git hooks/post-receive script.

misterc-guest pushed a commit to branch master
in repository jaligner.

commit a3ab0edf9ba571c8c924763c2fbb0b14c741c2b4
Author: Michael R. Crusoe <mcrusoe at msu.edu>
Date:   Sun Feb 15 14:59:48 2015 -0500

    add ITP #; relax dependencies; add license info
---
 debian/changelog |  2 +-
 debian/control   | 19 +++++++++++++------
 debian/copyright | 28 ++++++++++++++++++++++++++++
 3 files changed, 42 insertions(+), 7 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index a0a8122..31e457c 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,5 +1,5 @@
 jaligner (1.0-1) UNRELEASED; urgency=medium
 
-  * Initial release. (Closes: #XXXXXX)
+  * Initial release. (Closes: #778489)
 
  -- Tim Booth <tbooth at ceh.ac.uk>  Sun, 01 Feb 2015 17:30:31 +0000
diff --git a/debian/control b/debian/control
index 0d028de..a24bc3a 100644
--- a/debian/control
+++ b/debian/control
@@ -1,15 +1,22 @@
 Source: jaligner
+Maintainer: Tim Booth <tbooth at ceh.ac.uk>
 Section: science
 Priority: extra
-Maintainer: Tim Booth <tbooth at ceh.ac.uk>
-Build-Depends: debhelper (>= 9), default-jdk, junit4, javahelper,
-               icedtea-netx-common, ruby-ronn
-Standards-Version: 3.9.5
+Build-Depends: debhelper (>= 9),
+               default-jdk
+Build-Depends-Indep: junit4,
+                     javahelper,
+                     icedtea-netx-common,
+                     ruby-ronn
+Standards-Version: 3.9.6
 
 Package: jaligner
 Architecture: all
-Depends: ${java:Depends}, ${misc:Depends}, default-jre
-Description: implementation of the Smith-Waterman algorithm with Gotoh's improvement
+Depends: ${java:Depends},
+         ${misc:Depends},
+         default-jre-headless
+Suggests: default-jre
+Description: Smith-Waterman algorithm with Gotoh's improvement
  JAligner is an open source Java implementation of the Smith-Waterman
  algorithm with Gotoh's improvement for biological local pairwise sequence
  alignment with the affine gap penalty model.
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..d998edd
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,28 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: JAligner
+Upstream-Contact: ahmed at users.sf.net
+Source: http://sourceforge.net/projects/jaligner/files/jaligner/1.0/jaligner-1.0.tgz/download 
+
+Files: *
+Copyright:
+License: GPL-2+
+ This program is free software; you can redistribute it
+ and/or modify it under the terms of the GNU General Public
+ License as published by the Free Software Foundation; either
+ version 2 of the License, or (at your option) any later
+ version.
+ .
+ This program is distributed in the hope that it will be
+ useful, but WITHOUT ANY WARRANTY; without even the implied
+ warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ PURPOSE.  See the GNU General Public License for more
+ details.
+ .
+ You should have received a copy of the GNU General Public
+ License along with this package; if not, write to the Free
+ Software Foundation, Inc., 51 Franklin St, Fifth Floor,
+ Boston, MA  02110-1301 USA
+ .
+ On Debian systems, the full text of the GNU General Public
+ License version 2 can be found in the file
+ `/usr/share/common-licenses/GPL-2'.

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/jaligner.git