[med-svn] [rsem] 12/13: don't clean non-existent sam directory

[Michael Crusoe]

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misterc-guest pushed a commit to branch master
in repository rsem.

commit e66b32480fba3fdc7ce1d5aeaa371b95c9dbdef7
Author: Michael R. Crusoe <mcrusoe at msu.edu>
Date:   Mon Feb 16 19:07:21 2015 -0500

    don't clean non-existent sam directory
---
 debian/patches/ignore-sam | 11 ++++++++---
 1 file changed, 8 insertions(+), 3 deletions(-)

diff --git a/debian/patches/ignore-sam b/debian/patches/ignore-sam
index 2f9c507..49d4edc 100644
--- a/debian/patches/ignore-sam
+++ b/debian/patches/ignore-sam
@@ -1,5 +1,5 @@
---- rsem.orig/Makefile
-+++ rsem/Makefile
+--- a/Makefile
++++ b/Makefile
 @@ -7,9 +7,6 @@
  
  all : $(PROGRAMS)
@@ -78,7 +78,7 @@
  	$(CC) $(COFLAGS) wiggle.cpp
  
  rsem-simulate-reads : simulation.o
-@@ -130,14 +123,14 @@
+@@ -130,19 +123,17 @@
  calcCI.o : utils.h my_assert.h boost/random.hpp sampling.h Model.h SingleModel.h SingleQModel.h PairedEndModel.h PairedEndQModel.h RefSeq.h RefSeqPolicy.h PolyARules.h Refs.h GroupInfo.h WriteResults.h Buffer.h calcCI.cpp
  	$(CC) $(COFLAGS) calcCI.cpp
  
@@ -99,3 +99,8 @@
  
  ebseq :
  	cd EBSeq ; ${MAKE} all
+ 
+ clean :
+ 	rm -f *.o *~ $(PROGRAMS)
+-	cd sam ; ${MAKE} clean
+-	cd EBSeq ; ${MAKE} clean

-- 
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