[med-svn] [subread] 02/02: d/README.Debian: add note about subread user guide url d/doc-base: remove, as no documentation supplied with the package d/subread.docs: remove SubreadUserGuide.pdf d/subread.install: lineup the lines

[Alex Mestiashvili]

This is an automated email from the git hooks/post-receive script.

malex-guest pushed a commit to branch master
in repository subread.

commit f1a530b5fdc87a9a65781a8098f079d063112816
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Thu May 7 15:27:05 2015 +0200

    d/README.Debian: add note about subread user guide url
    d/doc-base: remove, as no documentation supplied with the package
    d/subread.docs: remove SubreadUserGuide.pdf
    d/subread.install: lineup the lines
---
 debian/README.Debian   |  6 +++++-
 debian/doc-base        | 12 ------------
 debian/subread.docs    |  1 -
 debian/subread.install | 26 +++++++++++++-------------
 4 files changed, 18 insertions(+), 27 deletions(-)

diff --git a/debian/README.Debian b/debian/README.Debian
index a0a9438..b09a4f4 100644
--- a/debian/README.Debian
+++ b/debian/README.Debian
@@ -8,4 +8,8 @@ The man pages for subread tools are generated using help2man tool.
 
 Tests and annotations are provided by subread-data package.
 
--- Alex Mestiashvili <alex at biotec.tu-dresden.de>  Mon, 16 Mar 2015 16:18:09 +0100
+Subread User Guide can be found on the project's web site:
+
+  http://bioinf.wehi.edu.au/subread-package/SubreadUsersGuide.pdf
+
+-- Alex Mestiashvili <alex at biotec.tu-dresden.de>  Thu, 07 May 2015 15:24:57 +0200
diff --git a/debian/doc-base b/debian/doc-base
deleted file mode 100644
index 24013ba..0000000
--- a/debian/doc-base
+++ /dev/null
@@ -1,12 +0,0 @@
-Document: subread
-Title: Users Guide for subread aligner
-Author: Liao Y, Smyth GK, Shi W
-Abstract: The Subread/Rsubread packages comprise a suite of high-performance
- software programs for processing next-generation sequencing data. Included in 
- these packages are Subread aligner, Subjunc aligner, Subindel long indel 
- detection program, featureCounts read quantification program, exactSNP SNP
- calling program and other utility programs.
-Section: Science/Biology
-
-Format: pdf
-Files: /usr/share/doc/subread/SubreadUsersGuide.pdf
diff --git a/debian/subread.docs b/debian/subread.docs
index 05bd242..71dfd5b 100644
--- a/debian/subread.docs
+++ b/debian/subread.docs
@@ -1,2 +1 @@
 README.txt
-doc/SubreadUsersGuide.pdf
diff --git a/debian/subread.install b/debian/subread.install
index b4a7a27..603d9ab 100644
--- a/debian/subread.install
+++ b/debian/subread.install
@@ -1,13 +1,13 @@
-bin/exactSNP	 usr/bin
-bin/featureCounts	 usr/bin
-bin/subindel	 usr/bin
-bin/subjunc		 usr/bin
-bin/subread-align	 usr/bin
-bin/subread-buildindex usr/bin
-bin/utilities/coverageCount	 usr/lib/subread
-bin/utilities/globalReassembly usr/lib/subread
-bin/utilities/propmapped	 usr/lib/subread
-bin/utilities/qualityScores	 usr/lib/subread
-bin/utilities/removeDup	 usr/lib/subread
-bin/utilities/subread-fullscan usr/lib/subread
-bin/utilities/subtools 	 usr/lib/subread
+bin/exactSNP	 		usr/bin
+bin/featureCounts		usr/bin
+bin/subindel	 		usr/bin
+bin/subjunc		 	usr/bin
+bin/subread-align	 	usr/bin
+bin/subread-buildindex 		usr/bin
+bin/utilities/coverageCount	usr/lib/subread
+bin/utilities/globalReassembly 	usr/lib/subread
+bin/utilities/propmapped	usr/lib/subread
+bin/utilities/qualityScores	usr/lib/subread
+bin/utilities/removeDup	 	usr/lib/subread
+bin/utilities/subread-fullscan  usr/lib/subread
+bin/utilities/subtools 	 	usr/lib/subread

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/subread.git