[med-svn] r19197 - in trunk/packages/R/r-bioc-biostrings/trunk/debian: . patches

[Andreas Tille]

Author: tille
Date: 2015-05-09 23:20:48 +0000 (Sat, 09 May 2015)
New Revision: 19197

Modified:
   trunk/packages/R/r-bioc-biostrings/trunk/debian/changelog
   trunk/packages/R/r-bioc-biostrings/trunk/debian/control
   trunk/packages/R/r-bioc-biostrings/trunk/debian/patches/use_debian_packaged_zlib.patch
Log:
New upstream version


Modified: trunk/packages/R/r-bioc-biostrings/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-biostrings/trunk/debian/changelog	2015-05-09 23:11:25 UTC (rev 19196)
+++ trunk/packages/R/r-bioc-biostrings/trunk/debian/changelog	2015-05-09 23:20:48 UTC (rev 19197)
@@ -1,3 +1,9 @@
+r-bioc-biostrings (2.36.1-1) unstable; urgency=medium
+
+  * New upstream version
+
+ -- Andreas Tille <tille at debian.org>  Sun, 10 May 2015 01:02:30 +0200
+
 r-bioc-biostrings (2.34.0-1) experimental; urgency=medium
 
   * New upstream version

Modified: trunk/packages/R/r-bioc-biostrings/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-biostrings/trunk/debian/control	2015-05-09 23:11:25 UTC (rev 19196)
+++ trunk/packages/R/r-bioc-biostrings/trunk/debian/control	2015-05-09 23:20:48 UTC (rev 19197)
@@ -7,7 +7,7 @@
 Build-Depends: debhelper (>= 9),
                cdbs,
                r-base-dev,
-               r-bioc-xvector (>= 0.6.0)
+               r-bioc-xvector (>= 0.8.0)
 Standards-Version: 3.9.6
 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-biostrings/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-biostrings/trunk/

Modified: trunk/packages/R/r-bioc-biostrings/trunk/debian/patches/use_debian_packaged_zlib.patch
===================================================================
--- trunk/packages/R/r-bioc-biostrings/trunk/debian/patches/use_debian_packaged_zlib.patch	2015-05-09 23:11:25 UTC (rev 19196)
+++ trunk/packages/R/r-bioc-biostrings/trunk/debian/patches/use_debian_packaged_zlib.patch	2015-05-09 23:20:48 UTC (rev 19197)
@@ -5,13 +5,13 @@
 
 --- a/DESCRIPTION
 +++ b/DESCRIPTION
-@@ -12,7 +12,7 @@ biocViews: SequenceMatching, Genetics, S
+@@ -12,7 +12,7 @@ biocViews: SequenceMatching, Alignment,
  Depends: R (>= 2.8.0), methods, BiocGenerics (>= 0.11.3), S4Vectors (>=
-         0.2.2), IRanges (>= 1.99.27), XVector (>= 0.5.8)
+         0.5.21), IRanges (>= 2.1.2), XVector (>= 0.7.3)
  Imports: graphics, methods, stats, utils, BiocGenerics, IRanges,
 -        XVector, zlibbioc
 +        XVector
- LinkingTo: S4Vectors, IRanges, XVector
+ LinkingTo: S4Vectors (>= 0.5.21), IRanges, XVector
  Enhances: Rmpi
  Suggests: BSgenome (>= 1.13.14), BSgenome.Celegans.UCSC.ce2 (>=
 --- a/NAMESPACE