[med-svn] [kmer-tools] 03/03: Add meryl to debian/control and make some associated changes

[Afif Elghraoui]

This is an automated email from the git hooks/post-receive script.

afif-guest pushed a commit to branch master
in repository kmer-tools.

commit b5faa3e2ff85614a8d0caddc88e2a7223a63dc00
Author: Afif Elghraoui <afif at ghraoui.name>
Date:   Thu May 21 02:22:09 2015 -0700

    Add meryl to debian/control and make some associated changes
    
    Meryl does not require the other build-dependencies, so they
    may be removed for now. Still to do for this is to modify the
    kmer binary package to be a metapackage depending on meryl (and
    the other components in the future). Installed files must also
    be placed into the appropriate binary package.
---
 debian/control | 38 ++++++++++++++++++++++++++++++++++----
 1 file changed, 34 insertions(+), 4 deletions(-)

diff --git a/debian/control b/debian/control
index def7d45..68d4d53 100644
--- a/debian/control
+++ b/debian/control
@@ -4,9 +4,7 @@ Priority: optional
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Afif Elghraoui <afif at ghraoui.name>
 Build-Depends: debhelper (>= 9),
-	       libbz2-dev,
-	       python-dev,
-	       libkaz-dev
+	       libbz2-dev
 Standards-Version: 3.9.5
 Homepage: http://kmer.sourceforge.net
 Vcs-Git: git://anonscm.debian.org/debian-med/kmer-tools.git
@@ -25,7 +23,6 @@ Description: suite of tools for DNA sequence analysis
 Package: kmer-doc
 Architecture: all
 Description: documentation for kmer
- <insert long description, indented with spaces>
  The kmer package is a suite of tools for DNA sequence analysis.
  It provides tools for searching (ESTs, mRNAs, sequencing reads);
  aligning (ESTs, mRNAs, whole genomes); and a variety of analyses
@@ -56,3 +53,36 @@ Description: suite of tools for DNA sequence analysis (development lib)
  based on kmers.
  .
  This package contains the static libraries and header files.
+
+Package: meryl
+Architecture: any
+Depends: ${shlibs:Depends},
+	 ${misc:Depends}
+Description: in- and out-of-core kmer counting and utilities
+  meryl computes the kmer content of genomic sequences.  Kmer
+  content is represented as a list of kmers and the number of
+  times each occurs in the input sequences.  The kmer can be
+  restricted to only the forward kmer, only the reverse kmer,
+  or the canonical kmer (lexicographically smaller of the
+  forward and reverse kmer at each location).  Meryl can
+  report the histogram of counts, the list of kmers and their
+  counts, or can perform mathematical and set operations
+  on the processed data files.
+
+Package: libmeryl-dev
+Architecture: any
+Section: libdevel
+Depends: ${shlibs:Depends},
+	 ${misc:Depends}
+Description: in- and out-of-core kmer counting and utilities
+  meryl computes the kmer content of genomic sequences.  Kmer
+  content is represented as a list of kmers and the number of
+  times each occurs in the input sequences.  The kmer can be
+  restricted to only the forward kmer, only the reverse kmer,
+  or the canonical kmer (lexicographically smaller of the
+  forward and reverse kmer at each location).  Meryl can
+  report the histogram of counts, the list of kmers and their
+  counts, or can perform mathematical and set operations
+  on the processed data files.
+  .
+  This package contains the static libraries and header files.

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/kmer-tools.git