[med-svn] [r-bioc-limma] 02/03: Merge tag 'upstream/3.26.1+dfsg'

[Andreas Tille]

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tille pushed a commit to branch master
in repository r-bioc-limma.

commit db1f709c972dc2e5dec98f356751234c9387979c
Merge: b940c88 811b74f
Author: Andreas Tille <tille at debian.org>
Date:   Mon Nov 2 10:58:35 2015 +0100

    Merge tag 'upstream/3.26.1+dfsg'
    
    Upstream version 3.26.1+dfsg

 DESCRIPTION                 |   7 +-
 NAMESPACE                   |  17 +++
 R/avearrays.R               |   5 +-
 R/barcodeplot.R             |  10 +-
 R/decidetests.R             |   2 +-
 R/geneset-camera.R          |  19 ++--
 R/geneset-fry.R             |  40 ++++---
 R/geneset-roast.R           |  13 ++-
 R/goana.R                   |   2 +-
 R/kegga.R                   |   2 +-
 R/lmfit.R                   |  18 ++--
 R/read.R                    |  23 +++--
 R/sepchannel.R              |  14 ++-
 R/tricubeMovingAverage.R    |  36 ++++++-
 build/vignette.rds          | Bin 231 -> 230 bytes
 inst/doc/changelog.txt      |  88 +++++++++++++---
 inst/doc/intro.pdf          | Bin 46191 -> 46191 bytes
 man/barcodeplot.Rd          |  13 +--
 man/camera.Rd               |   5 +-
 man/controlStatus.Rd        |   8 +-
 man/ebayes.Rd               |   4 +-
 man/genas.Rd                |   2 +-
 man/roast.Rd                |   2 +
 man/romer.Rd                |   6 +-
 man/tmixture.Rd             |  26 ++---
 man/tricubeMovingAverage.Rd |  28 +++--
 tests/limma-Tests.R         |   4 +-
 tests/limma-Tests.Rout.save | 246 ++++++++++++++++++++++++++------------------
 vignettes/intro.Rnw         |  49 +++++++++
 29 files changed, 474 insertions(+), 215 deletions(-)

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