[med-svn] r20454 - in trunk/packages/genometools/tags: . 1.5.7-3/debian

Sascha Steinbiss sascha-guest at moszumanska.debian.org
Mon Nov 9 19:51:01 UTC 2015


Author: sascha-guest
Date: 2015-11-09 19:51:01 +0000 (Mon, 09 Nov 2015)
New Revision: 20454

Added:
   trunk/packages/genometools/tags/1.5.7-3/
   trunk/packages/genometools/tags/1.5.7-3/debian/changelog
   trunk/packages/genometools/tags/1.5.7-3/debian/control
Removed:
   trunk/packages/genometools/tags/1.5.7-3/debian/changelog
   trunk/packages/genometools/tags/1.5.7-3/debian/control
Log:
[svn-buildpackage] Tagging genometools 1.5.7-3

Deleted: trunk/packages/genometools/tags/1.5.7-3/debian/changelog
===================================================================
--- trunk/packages/genometools/trunk/debian/changelog	2015-11-09 09:06:04 UTC (rev 20452)
+++ trunk/packages/genometools/tags/1.5.7-3/debian/changelog	2015-11-09 19:51:01 UTC (rev 20454)
@@ -1,186 +0,0 @@
-genometools (1.5.7-2) unstable; urgency=low
-
-  * disable parallel building 
-
- -- Sascha Steinbiss <sascha at steinbiss.name>  Sat, 10 Oct 2015 12:04:37 +0000
-
-genometools (1.5.7-1) unstable; urgency=low
-
-  * New upstream release.
-  * d/rules: try ro improve reproducibility
-
- -- Sascha Steinbiss <sascha at steinbiss.name>  Sun, 13 Sep 2015 08:22:39 +0000
-
-genometools (1.5.6-1) unstable; urgency=low
-
-  * New upstream release.
-
- -- Sascha Steinbiss <sascha at steinbiss.name>  Mon, 22 Jun 2015 19:26:35 +0000
-
-genometools (1.5.5-2) unstable; urgency=low
-
-  * Disable faketime on hurd-i386 to fix FTBFS on that arch.
-
- -- Sascha Steinbiss <sascha at steinbiss.name>  Wed, 10 Jun 2015 10:03:22 +0000
-
-genometools (1.5.5-1) unstable; urgency=low
-
-  * New upstream release. 
-
- -- Sascha Steinbiss <sascha at steinbiss.name>  Sat, 06 Jun 2015 09:49:49 +0000
-
-genometools (1.5.4-2) experimental; urgency=low
-
-  * Work towards reproducibility.
-
- -- Sascha Steinbiss <sascha at steinbiss.name>  Sun, 22 Mar 2015 08:09:07 +0000
-
-genometools (1.5.4-1) experimental; urgency=low
-
-  * New upstream release.
-
- -- Sascha Steinbiss <sascha at steinbiss.name>  Fri, 12 Dec 2014 12:06:42 +0000
-
-genometools (1.5.3-2) unstable; urgency=low
-
-  * Reactivate missing patch.
-
- -- Sascha Steinbiss <sascha at steinbiss.name>  Fri, 05 Sep 2014 14:23:31 +0100
-
-genometools (1.5.3-1) unstable; urgency=low
-
-  * New upstream release.
-
- -- Sascha Steinbiss <sascha at steinbiss.name>  Wed, 16 Jul 2014 20:32:19 +0100
-
-genometools (1.5.2-4) unstable; urgency=low
-
-  * Incorporate patches addressing type conversion errors (thanks to
-    Michael Tautschnig).
-    Closes: #748305
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Sat, 24 May 2014 18:57:45 +0000
-
-genometools (1.5.2-3) unstable; urgency=low
-
-  * Address building issues on s390x, powerpc and armhf
-  * Don't use -m64 for arm64 (thanks to Logan Rosen)
-    Closes: #748708
-  * Build-depend on docbook-xsl to fix FTBFS while offline (thanks to
-    Logan Rosen)
-    Closes: #748709
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Mon, 19 May 2014 23:06:34 +0000
-
-genometools (1.5.2-2) unstable; urgency=low
-
-  * Split manuals into separate documents to avoid strange LaTeX build issues.
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Thu, 15 May 2014 23:23:20 +0000
-
-genometools (1.5.2-1) unstable; urgency=low
-
-  * New upstream release.
-  * Remove symbols file because private symbols are exported (next upstream
-    version will properly control exported symbols and a new symbols file
-    will be created and maintained)
-  * Remove manpages from debian directory as they are now autogenerated on
-    build
-  * Fix some missing symbols problems
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Thu, 15 May 2014 10:51:41 +0000
-
-genometools (1.5.1-3) unstable; urgency=low
-
-  * debian/rules
-     - Add basic tests to check whether cairo/pango linking works
-     - Clean up indices created by tests to make repeated builds possible
-     - Make sure bin/examples/sketch_parsed_with_* are built
-     - Enable compiler optimization
-  * debian/control
-     - Move libgenometools0 package into libs section
-     - Switch pango deps to new package
-     - Add ruby builddep, required for the testsuite
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Wed, 06 Nov 2013 14:28:41 +0100
-
-genometools (1.5.1-2) unstable; urgency=low
-
-  * debian/control
-     - Add myself to Uploaders
-     - cme fix dpkg-control
-     - Follow liblua package name transition
-       Closes: #728017
-     - Remove depends from virtual package python-ctypes which is provided
-       by python
-  * provide symbols file
-
- -- Andreas Tille <tille at debian.org>  Mon, 28 Oct 2013 08:17:04 +0100
-
-genometools (1.5.1-1) unstable; urgency=low
-
-  * New upstream release.
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Thu, 07 Mar 2013 14:08:05 +0100
-
-genometools (1.5.0-2) unstable; urgency=low
-
-  * Patch manuals not to use includecomment/excludecomment
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Sat, 16 Feb 2013 16:58:11 +0100
-
-genometools (1.5.0-1) unstable; urgency=low
-
-  * New upstream release
-  * bugfixes and cleanups
-  * development tool `gt sain' added to run an induced suffix array sorting
-    algorithm
-  * the -typecheck option in the `gt gff3` and `gt gff3validator` tools
-    now also validates parent (part-of) relationships, see -help output for
-    details
-  * new option -encseq besides -seqfile(s) and -regionmapping to select a
-    encseq index as a sequence source
-  * GtBioseq backend switched to GtEncseq
-  * GtSeqCol is now an interface, GtEncseqCol added
-  * GtRankedList added
-  * GtSNPAnnotatorStream and `gt snpper' tool added
-  * node sorting code is now aware of MD5 hash presence
-  * compatibility with old Pango versions inproved
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Tue, 05 Feb 2013 18:52:22 +0100
-
-genometools (1.4.2-4) unstable; urgency=low
-
-  * Remove shlibs.local file
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Tue, 09 Oct 2012 12:24:17 +0200
-
-genometools (1.4.2-3) unstable; urgency=low
-
-  * Build with pbuilder to obtain reasonable libc dependency (>= 2.13)
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Tue, 09 Oct 2012 10:04:34 +0200
-
-genometools (1.4.2-2) unstable; urgency=low
-
-  * Fixed libpango-dev dependency
-  * Updated manpages
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Mon, 08 Oct 2012 07:51:52 +0200
-
-genometools (1.4.2-1) unstable; urgency=low
-
-  * New upstream release
-  [ Sponsor Steffen Moeller ]
-  * Update of policy to 3.9.4
-  * Added DMUA flag
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Fri, 05 Oct 2012 15:47:56 +0200
-
-genometools (1.4.1-1) unstable; urgency=low
-
-  * Initial release (Closes: #657923)
-  * the GFF3 parser now handles children which are defined before their parents
-  * many small improvements to the GFF3 parser
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Mon, 09 Jul 2012 14:10:23 +0100

Copied: trunk/packages/genometools/tags/1.5.7-3/debian/changelog (from rev 20453, trunk/packages/genometools/trunk/debian/changelog)
===================================================================
--- trunk/packages/genometools/tags/1.5.7-3/debian/changelog	                        (rev 0)
+++ trunk/packages/genometools/tags/1.5.7-3/debian/changelog	2015-11-09 19:51:01 UTC (rev 20454)
@@ -0,0 +1,193 @@
+genometools (1.5.7-3) unstable; urgency=low
+
+  * d/control: remove obsolete dependency on libncurses5
+    Closes: #804576 
+
+ -- Sascha Steinbiss <sascha at steinbiss.name>  Mon, 09 Nov 2015 19:15:29 +0000
+
+genometools (1.5.7-2) unstable; urgency=low
+
+  * disable parallel building 
+
+ -- Sascha Steinbiss <sascha at steinbiss.name>  Sat, 10 Oct 2015 12:04:37 +0000
+
+genometools (1.5.7-1) unstable; urgency=low
+
+  * New upstream release.
+  * d/rules: try ro improve reproducibility
+
+ -- Sascha Steinbiss <sascha at steinbiss.name>  Sun, 13 Sep 2015 08:22:39 +0000
+
+genometools (1.5.6-1) unstable; urgency=low
+
+  * New upstream release.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name>  Mon, 22 Jun 2015 19:26:35 +0000
+
+genometools (1.5.5-2) unstable; urgency=low
+
+  * Disable faketime on hurd-i386 to fix FTBFS on that arch.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name>  Wed, 10 Jun 2015 10:03:22 +0000
+
+genometools (1.5.5-1) unstable; urgency=low
+
+  * New upstream release. 
+
+ -- Sascha Steinbiss <sascha at steinbiss.name>  Sat, 06 Jun 2015 09:49:49 +0000
+
+genometools (1.5.4-2) experimental; urgency=low
+
+  * Work towards reproducibility.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name>  Sun, 22 Mar 2015 08:09:07 +0000
+
+genometools (1.5.4-1) experimental; urgency=low
+
+  * New upstream release.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name>  Fri, 12 Dec 2014 12:06:42 +0000
+
+genometools (1.5.3-2) unstable; urgency=low
+
+  * Reactivate missing patch.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name>  Fri, 05 Sep 2014 14:23:31 +0100
+
+genometools (1.5.3-1) unstable; urgency=low
+
+  * New upstream release.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name>  Wed, 16 Jul 2014 20:32:19 +0100
+
+genometools (1.5.2-4) unstable; urgency=low
+
+  * Incorporate patches addressing type conversion errors (thanks to
+    Michael Tautschnig).
+    Closes: #748305
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Sat, 24 May 2014 18:57:45 +0000
+
+genometools (1.5.2-3) unstable; urgency=low
+
+  * Address building issues on s390x, powerpc and armhf
+  * Don't use -m64 for arm64 (thanks to Logan Rosen)
+    Closes: #748708
+  * Build-depend on docbook-xsl to fix FTBFS while offline (thanks to
+    Logan Rosen)
+    Closes: #748709
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Mon, 19 May 2014 23:06:34 +0000
+
+genometools (1.5.2-2) unstable; urgency=low
+
+  * Split manuals into separate documents to avoid strange LaTeX build issues.
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Thu, 15 May 2014 23:23:20 +0000
+
+genometools (1.5.2-1) unstable; urgency=low
+
+  * New upstream release.
+  * Remove symbols file because private symbols are exported (next upstream
+    version will properly control exported symbols and a new symbols file
+    will be created and maintained)
+  * Remove manpages from debian directory as they are now autogenerated on
+    build
+  * Fix some missing symbols problems
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Thu, 15 May 2014 10:51:41 +0000
+
+genometools (1.5.1-3) unstable; urgency=low
+
+  * debian/rules
+     - Add basic tests to check whether cairo/pango linking works
+     - Clean up indices created by tests to make repeated builds possible
+     - Make sure bin/examples/sketch_parsed_with_* are built
+     - Enable compiler optimization
+  * debian/control
+     - Move libgenometools0 package into libs section
+     - Switch pango deps to new package
+     - Add ruby builddep, required for the testsuite
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Wed, 06 Nov 2013 14:28:41 +0100
+
+genometools (1.5.1-2) unstable; urgency=low
+
+  * debian/control
+     - Add myself to Uploaders
+     - cme fix dpkg-control
+     - Follow liblua package name transition
+       Closes: #728017
+     - Remove depends from virtual package python-ctypes which is provided
+       by python
+  * provide symbols file
+
+ -- Andreas Tille <tille at debian.org>  Mon, 28 Oct 2013 08:17:04 +0100
+
+genometools (1.5.1-1) unstable; urgency=low
+
+  * New upstream release.
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Thu, 07 Mar 2013 14:08:05 +0100
+
+genometools (1.5.0-2) unstable; urgency=low
+
+  * Patch manuals not to use includecomment/excludecomment
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Sat, 16 Feb 2013 16:58:11 +0100
+
+genometools (1.5.0-1) unstable; urgency=low
+
+  * New upstream release
+  * bugfixes and cleanups
+  * development tool `gt sain' added to run an induced suffix array sorting
+    algorithm
+  * the -typecheck option in the `gt gff3` and `gt gff3validator` tools
+    now also validates parent (part-of) relationships, see -help output for
+    details
+  * new option -encseq besides -seqfile(s) and -regionmapping to select a
+    encseq index as a sequence source
+  * GtBioseq backend switched to GtEncseq
+  * GtSeqCol is now an interface, GtEncseqCol added
+  * GtRankedList added
+  * GtSNPAnnotatorStream and `gt snpper' tool added
+  * node sorting code is now aware of MD5 hash presence
+  * compatibility with old Pango versions inproved
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Tue, 05 Feb 2013 18:52:22 +0100
+
+genometools (1.4.2-4) unstable; urgency=low
+
+  * Remove shlibs.local file
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Tue, 09 Oct 2012 12:24:17 +0200
+
+genometools (1.4.2-3) unstable; urgency=low
+
+  * Build with pbuilder to obtain reasonable libc dependency (>= 2.13)
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Tue, 09 Oct 2012 10:04:34 +0200
+
+genometools (1.4.2-2) unstable; urgency=low
+
+  * Fixed libpango-dev dependency
+  * Updated manpages
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Mon, 08 Oct 2012 07:51:52 +0200
+
+genometools (1.4.2-1) unstable; urgency=low
+
+  * New upstream release
+  [ Sponsor Steffen Moeller ]
+  * Update of policy to 3.9.4
+  * Added DMUA flag
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Fri, 05 Oct 2012 15:47:56 +0200
+
+genometools (1.4.1-1) unstable; urgency=low
+
+  * Initial release (Closes: #657923)
+  * the GFF3 parser now handles children which are defined before their parents
+  * many small improvements to the GFF3 parser
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de>  Mon, 09 Jul 2012 14:10:23 +0100

Deleted: trunk/packages/genometools/tags/1.5.7-3/debian/control
===================================================================
--- trunk/packages/genometools/trunk/debian/control	2015-11-09 09:06:04 UTC (rev 20452)
+++ trunk/packages/genometools/tags/1.5.7-3/debian/control	2015-11-09 19:51:01 UTC (rev 20454)
@@ -1,135 +0,0 @@
-Source: genometools
-Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Sascha Steinbiss <sascha at steinbiss.name>,
-           Andreas Tille <tille at debian.org>
-Section: science
-Priority: optional
-Build-Depends: debhelper (>= 9),
-               liblua5.1-0-dev,
-               lua-md5-dev,
-               lua-filesystem-dev,
-               lua-lpeg-dev,
-               libcairo2-dev,
-               zlib1g-dev,
-               libbz2-dev,
-               libexpat1-dev,
-               libncurses5-dev,
-               libsqlite3-dev,
-               libbam-dev,
-               libpango1.0-dev,
-               libtre-dev,
-               texlive-latex-base,
-               texlive-latex-extra,
-               texlive-fonts-extra,
-               latex-xcolor,
-               texlive-fonts-recommended,
-               python,
-               asciidoc,
-               libxml2-utils,
-               xsltproc,
-               ruby,
-               docbook-xsl,
-               faketime
-Standards-Version: 3.9.6
-Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/genometools/trunk/
-Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/genometools/trunk/
-Homepage: http://genometools.org
-
-Package: genometools
-Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         genometools-common
-Description: versatile genome analysis toolkit
- The GenomeTools contains a collection of useful tools for biological
- sequence analysis and -presentation combined into a single binary.
- .
- The toolkit contains binaries for sequence and annotation handling, sequence
- compression, index structure generation and access, annotation visualization,
- and much more.
-
-Package: genometools-common
-Architecture: all
-Depends: ${misc:Depends},
-         liblua5.1-0,
-         libcairo2,
-         zlib1g,
-         libbz2-1.0,
-         libexpat1,
-         libpth20,
-         libncurses5,
-         libsqlite3-0,
-         libpango-1.0-0,
-         libpangocairo-1.0-0,
-         libtre5
-Description: shared data files for GenomeTools
- This package contains configuration files such as alphabet
- transformations, style files, etc. required to use the GenomeTools
- executable and/or library.
-
-Package: libgenometools0
-Architecture: any
-Section: libs
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         genometools-common
-Description: versatile genome analysis library
- This package contains the GenomeTools shared library and header
- files. It offers efficient sequence analysis components, available
- via an object-oriented interface.
- .
- Besides basic bioinformatics data structures, the library contains components
- for sequence and annotation handling, sequence compression, index structure
- generation and access, efficient matching, annotation visualization and much
- more.
-
-Package: libgenometools0-dev
-Architecture: any
-Section: libdevel
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         libgenometools0 (= ${binary:Version})
-Description: development files for GenomeTools
- This package contains the GenomeTools static library and necessary
- header files.
- .
- Besides basic bioinformatics data structures, the library contains components
- for sequence and annotation handling, sequence compression, index structure
- generation and access, efficient matching, annotation visualization and much
- more.
-
-Package: genometools-doc
-Architecture: all
-Section: doc
-Depends: ${misc:Depends}
-Description: documentation for GenomeTools
- This package contains API documentation and tool documentation for
- GenomeTools. The GenomeTools toolkit contains binaries for sequence and
- annotation handling, sequence compression, index structure generation and
- access, annotation visualization, and much more.
-
-Package: genometools-dbg
-Architecture: any
-Section: debug
-Priority: extra
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         genometools (= ${binary:Version}) | libgenometools0 (= ${binary:Version})
-Description: versatile genome analysis toolkit, with debug symbols
- This package contains debug information stripped from the GenomeTools.
- You may decide to install it to help identifying issues, typically
- to help communication with upstream developers.
-
-Package: python-genometools
-Architecture: any
-Section: python
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         ${python:Depends},
-         python-ctypes,
-         libgenometools0
-Description: Python bindings for genometools
- Partial Python2 bindings for the GenomeTools library. Besides basic
- bioinformatics data structures, the library contains components for sequence
- and annotation handling, sequence compression, index structure generation and
- access, efficient matching, annotation visualization and much more.

Copied: trunk/packages/genometools/tags/1.5.7-3/debian/control (from rev 20453, trunk/packages/genometools/trunk/debian/control)
===================================================================
--- trunk/packages/genometools/tags/1.5.7-3/debian/control	                        (rev 0)
+++ trunk/packages/genometools/tags/1.5.7-3/debian/control	2015-11-09 19:51:01 UTC (rev 20454)
@@ -0,0 +1,133 @@
+Source: genometools
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Sascha Steinbiss <sascha at steinbiss.name>,
+           Andreas Tille <tille at debian.org>
+Section: science
+Priority: optional
+Build-Depends: debhelper (>= 9),
+               liblua5.1-0-dev,
+               lua-md5-dev,
+               lua-filesystem-dev,
+               lua-lpeg-dev,
+               libcairo2-dev,
+               zlib1g-dev,
+               libbz2-dev,
+               libexpat1-dev,
+               libsqlite3-dev,
+               libbam-dev,
+               libpango1.0-dev,
+               libtre-dev,
+               texlive-latex-base,
+               texlive-latex-extra,
+               texlive-fonts-extra,
+               latex-xcolor,
+               texlive-fonts-recommended,
+               python,
+               asciidoc,
+               libxml2-utils,
+               xsltproc,
+               ruby,
+               docbook-xsl,
+               faketime
+Standards-Version: 3.9.6
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/genometools/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/genometools/trunk/
+Homepage: http://genometools.org
+
+Package: genometools
+Architecture: any
+Depends: ${shlibs:Depends},
+         ${misc:Depends},
+         genometools-common
+Description: versatile genome analysis toolkit
+ The GenomeTools contains a collection of useful tools for biological
+ sequence analysis and -presentation combined into a single binary.
+ .
+ The toolkit contains binaries for sequence and annotation handling, sequence
+ compression, index structure generation and access, annotation visualization,
+ and much more.
+
+Package: genometools-common
+Architecture: all
+Depends: ${misc:Depends},
+         liblua5.1-0,
+         libcairo2,
+         zlib1g,
+         libbz2-1.0,
+         libexpat1,
+         libpth20,
+         libsqlite3-0,
+         libpango-1.0-0,
+         libpangocairo-1.0-0,
+         libtre5
+Description: shared data files for GenomeTools
+ This package contains configuration files such as alphabet
+ transformations, style files, etc. required to use the GenomeTools
+ executable and/or library.
+
+Package: libgenometools0
+Architecture: any
+Section: libs
+Depends: ${shlibs:Depends},
+         ${misc:Depends},
+         genometools-common
+Description: versatile genome analysis library
+ This package contains the GenomeTools shared library and header
+ files. It offers efficient sequence analysis components, available
+ via an object-oriented interface.
+ .
+ Besides basic bioinformatics data structures, the library contains components
+ for sequence and annotation handling, sequence compression, index structure
+ generation and access, efficient matching, annotation visualization and much
+ more.
+
+Package: libgenometools0-dev
+Architecture: any
+Section: libdevel
+Depends: ${shlibs:Depends},
+         ${misc:Depends},
+         libgenometools0 (= ${binary:Version})
+Description: development files for GenomeTools
+ This package contains the GenomeTools static library and necessary
+ header files.
+ .
+ Besides basic bioinformatics data structures, the library contains components
+ for sequence and annotation handling, sequence compression, index structure
+ generation and access, efficient matching, annotation visualization and much
+ more.
+
+Package: genometools-doc
+Architecture: all
+Section: doc
+Depends: ${misc:Depends}
+Description: documentation for GenomeTools
+ This package contains API documentation and tool documentation for
+ GenomeTools. The GenomeTools toolkit contains binaries for sequence and
+ annotation handling, sequence compression, index structure generation and
+ access, annotation visualization, and much more.
+
+Package: genometools-dbg
+Architecture: any
+Section: debug
+Priority: extra
+Depends: ${shlibs:Depends},
+         ${misc:Depends},
+         genometools (= ${binary:Version}) | libgenometools0 (= ${binary:Version})
+Description: versatile genome analysis toolkit, with debug symbols
+ This package contains debug information stripped from the GenomeTools.
+ You may decide to install it to help identifying issues, typically
+ to help communication with upstream developers.
+
+Package: python-genometools
+Architecture: any
+Section: python
+Depends: ${shlibs:Depends},
+         ${misc:Depends},
+         ${python:Depends},
+         python-ctypes,
+         libgenometools0
+Description: Python bindings for genometools
+ Partial Python2 bindings for the GenomeTools library. Besides basic
+ bioinformatics data structures, the library contains components for sequence
+ and annotation handling, sequence compression, index structure generation and
+ access, efficient matching, annotation visualization and much more.




More information about the debian-med-commit mailing list