[med-svn] [fastml] 01/02: Build and test fixes

[Andreas Tille]

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tille pushed a commit to branch master
in repository fastml.

commit dc9299690ff5fb8fdf663be585dd5d75a7d901e5
Author: Andreas Tille <tille at debian.org>
Date:   Wed Nov 18 19:04:46 2015 +0100

    Build and test fixes
---
 debian/patches/fix_makefile4test.patch | 15 +++++++++++++++
 debian/patches/gcc_5.patch             | 14 ++++++++++++++
 debian/patches/series                  |  2 ++
 3 files changed, 31 insertions(+)

diff --git a/debian/patches/fix_makefile4test.patch b/debian/patches/fix_makefile4test.patch
new file mode 100644
index 0000000..161d332
--- /dev/null
+++ b/debian/patches/fix_makefile4test.patch
@@ -0,0 +1,15 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Mon, 22 Jun 2015 09:47:25 +0200
+Description: Current dir is not in PATH by default
+
+--- a/libs/phylogeny/tests/Makefile
++++ b/libs/phylogeny/tests/Makefile
+@@ -43,7 +43,7 @@ readTreeWithComments.out.tmp: readTreeWi
+ 	./$^>$@
+ 
+ %.out.tmp: %
+-	$(*) > $@
++	./$(*) > $@
+ 
+ tests: $(TESTS)
+ 
diff --git a/debian/patches/gcc_5.patch b/debian/patches/gcc_5.patch
new file mode 100644
index 0000000..05bd2f6
--- /dev/null
+++ b/debian/patches/gcc_5.patch
@@ -0,0 +1,14 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Mon, 22 Jun 2015 09:47:25 +0200
+Description: Add missing includes required by gcc-5
+
+--- a/libs/phylogeny/tests/readTreeWithComments.cpp
++++ b/libs/phylogeny/tests/readTreeWithComments.cpp
+@@ -3,6 +3,7 @@
+ 
+ #include <fstream>
+ #include <iostream>
++#include <stdlib.h>
+ #include <string>
+ #include <iomanip>
+ using namespace std;
diff --git a/debian/patches/series b/debian/patches/series
new file mode 100644
index 0000000..c16f911
--- /dev/null
+++ b/debian/patches/series
@@ -0,0 +1,2 @@
+gcc_5.patch
+fix_makefile4test.patch

-- 
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