[med-svn] [gubbins] 04/07: Remove upstream parts in debian/changelog (that's what CHANGELOG file is for)

Andreas Tille tille at debian.org
Thu Nov 19 10:48:43 UTC 2015


This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository gubbins.

commit 0e2bf8baef61456222259f1016561459bbfeba02
Author: Andreas Tille <tille at debian.org>
Date:   Thu Nov 19 11:40:02 2015 +0100

    Remove upstream parts in debian/changelog (that's what CHANGELOG file is for)
---
 debian/changelog | 251 -------------------------------------------------------
 1 file changed, 251 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index 42a5b72..4f2dc9c 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -3,254 +3,3 @@ gubbins (1.4.2-1) UNRELEASED; urgency=medium
   * Initial Debian release (Closes: #764232)
 
  -- Andreas Tille <tille at debian.org>  Thu, 19 Nov 2015 10:45:48 +0100
-
-gubbins (1.3.4~trusty1) trusty; urgency=low
-
-  * Identify blocks at end of genome
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 18 Apr 2015 14:51:00 +0000
-
-gubbins (1.3.3~trusty1) trusty; urgency=low
-
-  * Max window size arg bug
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Thu, 16 Apr 2015 16:09:00 +0000
-
-gubbins (1.3.2~trusty1) trusty; urgency=low
-
-  * pass in self to window size check
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Thu, 16 Apr 2015 16:00:00 +0000
-
-gubbins (1.3.1~trusty1) trusty; urgency=low
-
-  * Calculate bases used for clonal frame
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Thu, 16 Apr 2015 15:00:00 +0000
-
-gubbins (1.3.0~trusty1) trusty; urgency=low
-
-  * Apply filtering to leaf nodes
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 30 Mar 2015 14:17:00 +0000
-
-gubbins (1.2.5~trusty1) trusty; urgency=low
-
-  * Block out SNPs from downstream recombinations
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 30 Mar 2015 14:17:00 +0000
-
-gubbins (1.2.4~trusty1) trusty; urgency=low
-
-  * Python verion number in script
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 30 Mar 2015 14:17:00 +0000
-
-
-gubbins (1.2.3~trusty1) trusty; urgency=low
-
-  * Eggs werent included in deb
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 30 Mar 2015 14:17:00 +0000
-
-
-gubbins (1.2.2~trusty1) trusty; urgency=low
-
-  * Last sequence wasnt in array
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 30 Mar 2015 14:17:00 +0000
-
-gubbins (1.2.1~trusty1) trusty; urgency=low
-
-  * Update VCF and EMBL output formats
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 30 Mar 2015 11:36:00 +0000
-
-gubbins (1.2.0~trusty1) trusty; urgency=low
-
-  * Dont fill in parent bases with gaps from children
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 30 Mar 2015 10:16:00 +0000
-
-gubbins (1.1.2~trusty1) trusty; urgency=low
-
-  * Fix GFF formatting and C warnings
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Fri, 23 Jan 2015 16:02:00 +0000
-
-gubbins (1.1.1~trusty1) trusty; urgency=low
-
-  * Message to tell user theres a problem with outgroups not a clade
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Fri, 23 Jan 2015 16:02:00 +0000
-
-gubbins (1.1.0~trusty1) trusty; urgency=low
-
-  * Allow for multiple outgroups
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Fri, 23 Jan 2015 15:05:00 +0000
-
-gubbins (1.0.12~trusty1) trusty; urgency=low
-
-  * Remove internal labels from final tree
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Tue, 20 Jan 2015 09:03:00 +0000
-
-gubbins (1.0.11~trusty1) trusty; urgency=low
-
-  * Test inputs contain variation
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 19 Jan 2015 09:01:00 +0000
-
-gubbins (1.0.10~trusty1) trusty; urgency=low
-
-  * Upload failed on ubuntu
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 19 Jan 2015 09:01:00 +0000
-
-gubbins (1.0.9~trusty1) trusty; urgency=low
-
-  * Remove cpu info and manually look for the flag
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Tue, 6 Jan 2015 14:09:00 +0000
-
-gubbins (1.0.8~trusty1) trusty; urgency=low
-
-  * Limit the cpu info lookup to get around bug in ubuntu build
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 8 Dec 2014 12:58:00 +0000
-
-gubbins (1.0.7~trusty1) trusty; urgency=low
-
-  * Update rho/theta calculation to blocks/snps outside recombinations
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 8 Dec 2014 12:58:00 +0000
-
-gubbins (1.0.6~trusty1) trusty; urgency=low
-
-  * Drawer allow for variation tag
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Wed, 3 Dec 2014 11:32:00 +0000
-
-gubbins (1.0.5~trusty1) trusty; urgency=low
-
-  * Fasttree executables with upper and lower case
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Wed, 19 Nov 2014 14:16:00 +0000
-
-gubbins (1.0.4~trusty1) trusty; urgency=low
-
-  * Warning when number of threads changed for raxml
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Fri, 14 Nov 2014 14:16:00 +0000
-
-gubbins (1.0.3~trusty1) trusty; urgency=low
-
-  * Dont use multiple threads for raxml if not requested
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Fri, 14 Nov 2014 14:16:00 +0000
-
-gubbins (1.0.2~trusty1) trusty; urgency=low
-
-  * Allow for more convergence methods
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Tue, 14 Oct 2014 14:16:00 +0000
-
-gubbins (1.0.1~trusty1) trusty; urgency=low
-
-  * Fixed unstable python test
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Tue, 14 Oct 2014 14:16:00 +0000
-
-gubbins (1.0~trusty1) trusty; urgency=low
-
-  * Strict convergence option
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Tue, 14 Oct 2014 14:16:00 +0000
-
-gubbins (0.6~trusty1) trusty; urgency=low
-
-  * Gubbins drawer can now use .embl file with recombination regions
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Tue, 9 Sep 2014 13:03:00 +0000
-
-gubbins (0.5~trusty1) trusty; urgency=low
-
-  * Thread support for RAXML
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Tue, 9 Sep 2014 09:45:00 +0000
-
-gubbins (0.4.1~trusty1) trusty; urgency=low
-
-  * Check for FastTree lowercase executable
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 8 Sep 2014 10:32:00 +0000
-
-gubbins (0.4~trusty1) trusty; urgency=low
-
-  * Rename output files for pairwise comparison
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Fri, 5 Sep 2014 10:26:00 +0000
-
-gubbins (0.3~trusty1) trusty; urgency=low
-
-  * Changes statistics file output
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Thu, 4 Sep 2014 17:07:00 +0000
-
-gubbins (0.2~trusty1) trusty; urgency=low
-
-  * Rename final output files
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Mon, 1 Sep 2014 16:44:00 +0000
-
-gubbins (0.1.11~trusty1) trusty; urgency=low
-
-  * Python remove internal node names if passed in as a starting tree
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Fri, 22 Aug 2014 16:44:00 +0000
-
-gubbins (0.1.10~trusty1) trusty; urgency=low
-
-  * Python print list of excluded sequences to STDOUT by default
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Fri, 22 Aug 2014 14:44:00 +0000
-
-gubbins (0.1.9~trusty1) trusty; urgency=low
-
-  * Python prints error messages for invalid sequence files and sends exit code 1
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Fri, 22 Aug 2014 10:37:00 +0000
-
-gubbins (0.1.8~trusty1) trusty; urgency=low
-
-  * Python fastml exec fix
-  * Python check sequence names in tree
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Thu, 15 Aug 2014 16:32:00 +0000
-
-gubbins (0.1.7~trusty2) trusty; urgency=low
-
-  * Package for trusty
-  * Move blocks further inwards
-
- -- Andrew Page <ap13 at sanger.ac.uk>  Thu, 14 Aug 2014 09:56:00 +0000
-
-gubbins (0.1.6) saucy; urgency=low
-
-  * Changed build depends
-
- -- Aidan Delaney (Packaging Key) <aidan at ontologyengineering.org>  Wed, 26 Jun 2014 14:46:07 +0000
-
-gubbins (0.1.5) saucy; urgency=low
-
-  * Updated build system and removed some tests
-
- -- Aidan Delaney (Packaging Key) <aidan at ontologyengineering.org>  Wed, 25 Jun 2014 14:46:07 +0000
-
-gubbins (0.1.4) saucy; urgency=low
-
-  * Updated Debian packages such that the build version is taken from Automake.
-
- -- Aidan Delaney (Packaging Key) <aidan at ontologyengineering.org>  Mon, 31 Mar 2014 14:46:07 +0000
-

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/gubbins.git



More information about the debian-med-commit mailing list