[med-svn] [qualimap] 01/01: We do nit need biojava but rather the classes described at http://www.massapi.com/package/org/bioinfo/index.html

Andreas Tille tille at debian.org
Thu Nov 26 18:19:20 UTC 2015


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tille pushed a commit to branch master
in repository qualimap.

commit 3146f26e4d36c6a1bac671405224d77f6ab5da69
Author: Andreas Tille <tille at debian.org>
Date:   Thu Nov 26 19:18:49 2015 +0100

    We do nit need biojava but rather the classes described at http://www.massapi.com/package/org/bioinfo/index.html
---
 debian/changelog   | 2 +-
 debian/control     | 1 -
 debian/maven.rules | 2 --
 3 files changed, 1 insertion(+), 4 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index 3f577f0..0462e36 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,6 +1,6 @@
 qualimap (2.1.3+dfsg-1) UNRELEASED; urgency=low
 
   * Initial release (Closes: #<bug>)
-  TODO: git://anonscm.debian.org/pkg-java/libejml-java.git
+  TODO: http://www.massapi.com/package/org/bioinfo/index.html
 
  -- Andreas Tille <tille at debian.org>  Tue, 17 Nov 2015 14:47:59 +0100
diff --git a/debian/control b/debian/control
index d29023e..95c18c7 100644
--- a/debian/control
+++ b/debian/control
@@ -12,7 +12,6 @@ Build-Depends: debhelper (>= 9),
                libmaven-install-plugin-java,
                picard-tools,
                libsam-java,
-               libbiojava4-java,
                libmiglayout-java,
                libejml-java
 Standards-Version: 3.9.6
diff --git a/debian/maven.rules b/debian/maven.rules
index e3d429f..f9381b2 100644
--- a/debian/maven.rules
+++ b/debian/maven.rules
@@ -1,6 +1,4 @@
-
 junit junit jar s/4\..*/4.x/ * *
-org.bioinfo ngs jar s/.*/fake/ * *
 #replaced by quilt patch###net.sf.picard picard jar s/.*/fake/ * *
 #replaced by quilt patch###net.sf.samtools samtools jar s/.*/fake/ * *
 com.miglayout s/miglayout/miglayout-swing/ * s/.*/debian/ * *

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