[med-svn] [python-mne] 173/376: fixing manual

[Yaroslav Halchenko]

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yoh pushed a commit to annotated tag v0.1
in repository python-mne.

commit 2037e215f428931f421b48355d3d76f9ba451772
Author: Emily Ruzich <emilyr at nmr.mgh.harvard.edu>
Date:   Wed Mar 30 12:59:50 2011 -0400

    fixing manual
---
 doc/source/manual/AppA.rst            |  2 +-
 doc/source/manual/AppB.rst            |  2 +-
 doc/source/manual/AppInstall.rst      |  2 +-
 doc/source/manual/AppReleaseNotes.rst | 10 +++++-----
 4 files changed, 8 insertions(+), 8 deletions(-)

diff --git a/doc/source/manual/AppA.rst b/doc/source/manual/AppA.rst
index 4cc0611..c8a88b4 100755
--- a/doc/source/manual/AppA.rst
+++ b/doc/source/manual/AppA.rst
@@ -254,7 +254,7 @@ as outlined below
 
 **1. Set up the MRIs for Neuromag software access**
 
-    Run the mne_setup_mri too as described in Section 3.4.
+    Run the mne_setup_mri too as described in :ref:`BABCCEHF`.
     As a result, the directories mri/T1-neuromag and mri/brain-neuromag
     are set up.
 
diff --git a/doc/source/manual/AppB.rst b/doc/source/manual/AppB.rst
index 42c120f..682f73e 100755
--- a/doc/source/manual/AppB.rst
+++ b/doc/source/manual/AppB.rst
@@ -16,7 +16,7 @@ User environment
 
 In the Martinos Center computer network, the 2.7 version
 of MNE is located at /usr/pubsw/packages/mne/stable. To use this
-version, follow  Section 2.4 substituting /usr/pubsw/packages/mne/stable
+version, follow  :ref:`CIHCDHGI` substituting /usr/pubsw/packages/mne/stable
 for <MNE> and /usr/pubsw/packages/matlab/current
 for <Matlab> . For most users,
 the default shell is tcsh.
diff --git a/doc/source/manual/AppInstall.rst b/doc/source/manual/AppInstall.rst
index 2a580e3..bf467f0 100755
--- a/doc/source/manual/AppInstall.rst
+++ b/doc/source/manual/AppInstall.rst
@@ -154,7 +154,7 @@ How to get started
 After you have installed the software, a good place to start
 is to look at the manual:
 
-- Source the correct setup script, see Section 2.4,
+- Source the correct setup script, see :ref:`CIHCDHGI`,
   and
 
 - Say: ``mne_view_manual`` .
diff --git a/doc/source/manual/AppReleaseNotes.rst b/doc/source/manual/AppReleaseNotes.rst
index 1021489..ebf0d3a 100755
--- a/doc/source/manual/AppReleaseNotes.rst
+++ b/doc/source/manual/AppReleaseNotes.rst
@@ -41,7 +41,7 @@ The following overall changes have been made:
   directory tree.
 
 - Support for topologically connected source spaces was added,
-  see Section 3.5.
+  see :ref:`CIHCHDAE`.
 
 - A lot of bugs were fixed.
 
@@ -208,7 +208,7 @@ mne_surf2bem
 Added the ``--shift`` option to move surface vertices
 outwards. Fixed some loopholes in topology checks. Also added the ``--innershift`` option
 to mne_setup_forward_model . For
-more information, see Sections 3.7 and 5.6.
+more information, see :ref:`CIHDBFEG` and Section 5.6.
 
 mne_forward_solution
 ====================
@@ -452,7 +452,7 @@ Improvements in the raw data processor mne_browse_raw /mne_process_raw include:
   systems. These kind of data should never be used as an input for source
   localization.
 
-- The ``--savehere`` option was added, see Section 4.2.3.
+- The ``--savehere`` option was added, see :ref:`CACFAAAJ`.
 
 - The stderr parameter was
   added to the averaging definition files, see Section 4.13.3.
@@ -594,7 +594,7 @@ mne_setup_forward_model
 -----------------------
 
 Added the ``--outershift`` and ``--scalpshift`` options,
-see Section 3.7.
+see :ref:`CIHDBFEG`.
 
 mne_simu
 --------
@@ -781,7 +781,7 @@ Miscellaneous
   see Section 9.8.
 
 - Added the --morph option to mne_setup_source_space and mne_make_source_space ,
-  see Sections 3.5 and 5.4, respectively.
+  see :ref:`CIHCHDAE` and Section 5.4, respectively.
 
 - Added the --prefix option to mne_morph_labels ,
   see Section 8.5.

-- 
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