[med-svn] [ngs-sdk] 02/03: Merge tag 'upstream/1.2.5'

[Olivier Sallou]

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osallou pushed a commit to branch master
in repository ngs-sdk.

commit 05f127bf6350d3ff56097491c04c7ec4a2a575b2
Merge: 13e12c1 62d125b
Author: Olivier Sallou <olivier.sallou at debian.org>
Date:   Thu Aug 18 10:51:16 2016 +0200

    Merge tag 'upstream/1.2.5'
    
    Upstream version 1.2.5

 CHANGES                                            |  15 ++
 CHANGES.md                                         |  37 ++--
 ngs-bam/.gitignore                                 |   1 +
 ngs-bam/Makefile                                   |   2 +-
 ngs-bam/Makefile.install                           | 121 ++++++++++++
 ngs-bam/{Makefile => Makefile.vers}                |  23 +--
 ngs-bam/setup/konfigure.perl                       | 206 +++++++++++++--------
 ngs-bam/setup/package.prl                          |   1 -
 ngs-bam/Makefile => ngs-java/Makefile.vers         |  23 +--
 ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java |   4 +-
 ngs-java/setup/konfigure.perl                      | 204 ++++++++++++--------
 ngs-java/setup/package.prl                         |   1 -
 ngs-python/.gitignore                              |   1 +
 ngs-bam/Makefile => ngs-python/Makefile.vers       |  23 +--
 ngs-python/setup/konfigure.perl                    | 204 ++++++++++++--------
 ngs-python/setup/package.prl                       |   1 -
 ngs-sdk/.gitignore                                 |   1 +
 ngs-sdk/Makefile                                   |   2 +-
 ngs-bam/Makefile => ngs-sdk/Makefile.vers          |  23 +--
 ngs-sdk/dispatch/version.h                         |   2 +-
 ngs-sdk/language/java/jni_String.cpp               |  10 +-
 ngs-sdk/setup/konfigure.perl                       | 203 ++++++++++++--------
 ngs-sdk/setup/package.prl                          |   1 -
 23 files changed, 679 insertions(+), 430 deletions(-)

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