[med-svn] r22437 - trunk/packages/R/r-cran-treescape/trunk/debian

[Andreas Tille]

Author: tille
Date: 2016-07-08 11:00:05 +0000 (Fri, 08 Jul 2016)
New Revision: 22437

Added:
   trunk/packages/R/r-cran-treescape/trunk/debian/README.source
Log:
Explain binary data files


Added: trunk/packages/R/r-cran-treescape/trunk/debian/README.source
===================================================================
--- trunk/packages/R/r-cran-treescape/trunk/debian/README.source	                        (rev 0)
+++ trunk/packages/R/r-cran-treescape/trunk/debian/README.source	2016-07-08 11:00:05 UTC (rev 22437)
@@ -0,0 +1,40 @@
+Explanation for binary files inside source package according to
+  http://lists.debian.org/debian-devel/2013/09/msg00332.html
+
+The source packages contains some binary RData files which are
+documented inside the according manpages
+
+Files: data/DengueBEASTMCC.RData
+Documentation: man/DengueBEASTMCC.Rd
+ Dengue fever BEAST MCC tree
+ Format: phylo object
+ Source: http://bmcevolbiol.biomedcentral.com/articles/10.1186/1471-2148-7-214
+
+Files: data/DengueSeqs.RData
+Documentation: man/DengueSeqs.Rd
+ Dengue fever sequences
+ Format: DNAbin object containing 17 DNA sequences, each of length 1485.
+ Source: http://bmcevolbiol.biomedcentral.com/articles/10.1186/1471-2148-7-214
+
+Files: data/DengueTrees.RData
+Documentation: man/DengueTrees.Rd
+ BEAST analysis of Dengue fever
+ Format: multiPhylo object containing 500 trees, each with 17 tips
+ Source: http://bmcevolbiol.biomedcentral.com/articles/10.1186/1471-2148-7-214
+
+Files: data/fluTrees.RData
+Documentation: man/fluTrees.Rd
+ BEAST analysis of seasonal influenza (A/H3N2)
+ Format: multiPhylo object containing 200 trees, each with 165 tips
+ Source: http://beast.bio.ed.ac.uk/tutorials
+
+Files: data/woodmiceTrees.RData
+Documentation: man/woodmiceTrees.Rd
+ Bootstrap trees from woodmouse dataset
+ Format: multiPhylo object containing 201 trees, each with 15 tips
+ Source: A set of 15 sequences of the mitochondrial gene cytochrome b of the
+         woodmouse (Apodemus sylvaticus) which is a subset of the data analysed by
+         Michaux et al. (2003). The full data set is available through GenBank
+         (accession numbers AJ511877 to AJ511987)
+
+ -- Andreas Tille <tille at debian.org>  Tue, 22 Mar 2016 12:05:59 +0100