[med-svn] r22468 - in trunk/packages/insighttoolkit/trunk/debian: . patches

Gert Wollny gert-guest at moszumanska.debian.org
Sat Jul 9 12:13:54 UTC 2016


Author: gert-guest
Date: 2016-07-09 12:13:53 +0000 (Sat, 09 Jul 2016)
New Revision: 22468

Modified:
   trunk/packages/insighttoolkit/trunk/debian/copyright
   trunk/packages/insighttoolkit/trunk/debian/patches/atomic_load.patch
   trunk/packages/insighttoolkit/trunk/debian/patches/flatStructuringElementTest_fix_rescale.patch
   trunk/packages/insighttoolkit/trunk/debian/patches/itk4.10-correct_itkMathDetail_include-order.patch
   trunk/packages/insighttoolkit/trunk/debian/patches/itk4.10-enable-system-nifti.patch
Log:
more d/copyright updates and patch documentation

Modified: trunk/packages/insighttoolkit/trunk/debian/copyright
===================================================================
--- trunk/packages/insighttoolkit/trunk/debian/copyright	2016-07-09 10:55:53 UTC (rev 22467)
+++ trunk/packages/insighttoolkit/trunk/debian/copyright	2016-07-09 12:13:53 UTC (rev 22468)
@@ -14,8 +14,8 @@
   Modules/ThirdParty/ZLIB/src/itkzlib
   Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/amoeba_algorithm.pdf
   Documentation
+  Testing/Data/Input/DCB120604.t61/11/pulseprogram
 
-
   Debian ITK is Licensed under the GPL
   ------------------------------------
 
@@ -37,8 +37,11 @@
 Files: *
 Copyright: Copyright 1999-2011 Insight Software Consortium
 License: Apache 2.0
- A copy of the Apache 2.0 license can be found in /usr/share/common-licenses/Apache-2.0
 
+Files: debian/*
+Copyright:  Copyright 2007-2016 Debian-med team 
+License: Apache 2.0
+
 Files: Modules/ThirdParty/DICOMParser/src/DICOMParser/*
 Copyright: Copyright (c) 2003 Matt Turek
 License: BSD-4-clause-DICOMParser
@@ -70,9 +73,6 @@
  OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
  OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
-Files: debian/*
-Copyright:  Copyright 2007-2016 Debian-med team 
-License: Apache 2.0
 
 Files: Modules/ThirdParty/GIFTI/src/gifticlib/*
 Authors: Richard Reynolds, SSCC, DIRP, NIMH, National Institutes of Health 
@@ -81,14 +81,14 @@
  encouraged to incorporate the library into their application, and to
  contribute changes or enhancements to gifticlib.
 
+Files: Modules/ThirdParty/KWIML/src/itkkwiml/*
+Copyright: Copyright 2010-2015 Kitware, Inc.
+License: BSD-3-clause-Kitware
+
 Files: Modules/ThirdParty/KWSys/src/KWSys/*
 Copyright: Copyright 2000-2009 Kitware, Inc., Insight Software Consortium
 License: BSD-3-clause-Kitware
 
-Files: Modules/ThirdParty/KWIML/src/itkkwiml/*
-Copyright: Copyright 2010-2015 Kitware, Inc.
-License: BSD-3-clause-Kitware
-
 Files: Modules/ThirdParty/MetaIO/src/MetaIO/*
 Copyright: Copyright 2000-2014 Insight Software Consortium
 License: BSD-3-clause-MetaIO
@@ -149,6 +149,10 @@
  .
  3. This notice may not be removed or altered from any source distribution.
 
+Files: Modules/ThirdParty/NrrdIO/CMake/*
+Copyright: Copyright Insight Software Consortium
+License: Apache 2.0
+
 Files: Modules/ThirdParty/OpenJPEG/src/openjpeg/*
 Copyright: Copyright (c) 2002-2012, Communications and Remote Sensing Laboratory,
  Universite catholique de Louvain (UCL), Belgium
@@ -182,7 +186,7 @@
  ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
  POSSIBILITY OF SUCH DAMAGE.
 
-Files: Modules/ThirdParty/VNL/*
+Files: Modules/ThirdParty/VNL/src/vxl/*
 Copyright: Copyright 2000-2013 VXL Contributors
 License: BSD-3-clause-VXL
  Redistribution and use in source and binary forms, with or without
@@ -251,34 +255,62 @@
  customer, and you are instead telling them how they can obtain it for 
  free, then you are not required to make any arrangement with me.)
 
+Files: Modules/ThirdParty/VNL/src/vxl/vcl/internal/vcl_atomic_count_gcc.h
+Copyright:
+ Copyright (c) 2001, 2002 Peter Dimov and Multi Media Ltd.
+ Copyright (c) 2002 Lars Gullik Bjonnes <larsbj at lyx.org>
+ Copyright 2003-2005 Peter Dimov
+License: BSL-1.0 
+
+Files:
+ Modules/ThirdParty/VNL/src/vxl/vcl/internal/vcl_atomic_count_pthreads.h
+ Modules/ThirdParty/VNL/src/vxl/vcl/internal/vcl_atomic_count_gcc_x86.h
+Copyright: Copyright 2007 Peter Dimov
+License: BSL-1.0
+
+Files: Modules/ThirdParty/VNL/src/vxl/vcl/internal/vcl_atomic_count_sync.h
+Copyright: Copyright (c) 2001, 2002 Peter Dimov and Multi Media Ltd.
+License: BSL-1.0
+
+Files: Modules/ThirdParty/VNL/src/vxl/vcl/internal/vcl_interlocked.h
+Copyright: Copyright 2005 Peter Dimov
+License: BSL-1.0
+
+Files: Modules/ThirdParty/VNL/src/vxl/vcl/internal/vcl_atomic_count_solaris.h
+Copyright:
+ Copyright (c) 2001-2005 Peter Dimov
+ Copyright (c) 2006 Michael van der Westhuizen
+License: BSL-1.0
+
+Files: Modules/ThirdParty/VNL/src/vxl/vcl/internal/vcl_atomic_count_win32.h
+Copyright: Copyright (c) 2001-2005 Peter Dimov
+License: BSL-1.0 
+
 Files: Modules/ThirdParty/pygccxml/*
 Copyright:
  Copyright 2014-2015 Insight Software Consortium
  Copyright 2004-2008 Roman Yakovenko
-License: Boost Software License 1.0
- Permission is hereby granted, free of charge, to any person or organization
- obtaining a copy of the software and accompanying documentation covered by
- this license (the "Software") to use, reproduce, display, distribute,
- execute, and transmit the Software, and to prepare derivative works of the
- Software, and to permit third-parties to whom the Software is furnished to
- do so, all subject to the following:
- .
- The copyright notices in the Software and this entire statement, including
- the above license grant, this restriction and the following disclaimer,
- must be included in all copies of the Software, in whole or in part, and
- all derivative works of the Software, unless such copies or derivative
- works are solely in the form of machine-executable object code generated by
- a source language processor.
- .
- THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
- IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
- FITNESS FOR A PARTICULAR PURPOSE, TITLE AND NON-INFRINGEMENT. IN NO EVENT
- SHALL THE COPYRIGHT HOLDERS OR ANYONE DISTRIBUTING THE SOFTWARE BE LIABLE
- FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE,
- ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
- DEALINGS IN THE SOFTWARE.
+License: BSL-1.0
 
+Files: Modules/IO/ImageBase/include/itkfdstream/fdstream.hpp
+Copyright: (C) Copyright Nicolai M. Josuttis 2001.
+License: fdstream
+  Permission to copy, use, modify, sell and distribute this software
+  is granted provided this copyright notice appears in all copies.
+  This software is provided "as is" without express or implied
+  warranty, and with no claim as to its suitability for any purpose.
 
+Files:
+ Modules/Core/ImageFunction/include/itkGaussianInterpolateImageFunction.h
+ Modules/Core/ImageFunction/include/itkGaussianInterpolateImageFunction.hxx
+Copyright:
+ Copyright (c) Insight Software Consortium
+ Copyright (c) 1993-2015 Ken Martin, Will Schroeder, Bill Lorensen
+License: Apache 2.0 + VTK-Copyright
+
+License: Apache 2.0
+ A copy of the Apache 2.0 license can be found in /usr/share/common-licenses/Apache-2.0
+
 License: BSD-3-clause-Kitware
  Redistribution and use in source and binary forms, with or without
  modification, are permitted provided that the following conditions
@@ -308,3 +340,53 @@
  (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
  OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
+License: BSL-1.0
+ Boost Software License - Version 1.0 - August 17th, 2003
+ .
+ Permission is hereby granted, free of charge, to any person or organization
+ obtaining a copy of the software and accompanying documentation covered by
+ this license (the "Software") to use, reproduce, display, distribute,
+ execute, and transmit the Software, and to prepare derivative works of the
+ Software, and to permit third-parties to whom the Software is furnished to
+ do so, all subject to the following:
+ .
+ The copyright notices in the Software and this entire statement, including
+ the above license grant, this restriction and the following disclaimer,
+ must be included in all copies of the Software, in whole or in part, and
+ all derivative works of the Software, unless such copies or derivative
+ works are solely in the form of machine-executable object code generated by
+ a source language processor.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE, TITLE AND NON-INFRINGEMENT. IN NO EVENT
+ SHALL THE COPYRIGHT HOLDERS OR ANYONE DISTRIBUTING THE SOFTWARE BE LIABLE
+ FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE,
+ ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
+ DEALINGS IN THE SOFTWARE.
+
+License: VTK-Copyright
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted provided that the following conditions are met:
+ .
+ * Redistributions of source code must retain the above copyright notice,
+   this list of conditions and the following disclaimer.
+ .
+ * Redistributions in binary form must reproduce the above copyright notice,
+   this list of conditions and the following disclaimer in the documentation
+   and/or other materials provided with the distribution.
+ .
+ * Neither name of Ken Martin, Will Schroeder, or Bill Lorensen nor the names
+   of any contributors may be used to endorse or promote products derived
+   from this software without specific prior written permission.
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ``AS IS''
+ AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHORS OR CONTRIBUTORS BE LIABLE FOR
+ ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+ DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+ CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+ OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Modified: trunk/packages/insighttoolkit/trunk/debian/patches/atomic_load.patch
===================================================================
--- trunk/packages/insighttoolkit/trunk/debian/patches/atomic_load.patch	2016-07-09 10:55:53 UTC (rev 22467)
+++ trunk/packages/insighttoolkit/trunk/debian/patches/atomic_load.patch	2016-07-09 12:13:53 UTC (rev 22468)
@@ -1,7 +1,7 @@
 Description: Make the Load operation truly atomic
 Author: Gert Wollny <gw.fossdev at gmail.com>
-Forwarded: yes
-Last-Update: 2016-02-21
+Forwarded: https://issues.itk.org/jira/browse/ITK-3413
+Last-Update: 2016-07-09
 
 Index: b/Modules/Core/Common/include/itkAtomicIntDetail.h
 ===================================================================
@@ -17,3 +17,4 @@
    }
  
    static void Store(ValueType *ref, ValueType val)
+

Modified: trunk/packages/insighttoolkit/trunk/debian/patches/flatStructuringElementTest_fix_rescale.patch
===================================================================
--- trunk/packages/insighttoolkit/trunk/debian/patches/flatStructuringElementTest_fix_rescale.patch	2016-07-09 10:55:53 UTC (rev 22467)
+++ trunk/packages/insighttoolkit/trunk/debian/patches/flatStructuringElementTest_fix_rescale.patch	2016-07-09 12:13:53 UTC (rev 22468)
@@ -3,9 +3,9 @@
  image, but this filter is numerically unstable for this
  operation. 
 Author: Gert Wollny <gw.fossdev at gmail.com>
-Forwarded: yes
+Forwarded: https://issues.itk.org/jira/browse/ITK-3413
 Bug: https://bugs.debian.org/814591
-Last-Update: 2016-02-21
+Last-Update: 2016-07-09
 
 Index: b/Modules/Filtering/MathematicalMorphology/test/itkFlatStructuringElementTest2.cxx
 ===================================================================

Modified: trunk/packages/insighttoolkit/trunk/debian/patches/itk4.10-correct_itkMathDetail_include-order.patch
===================================================================
--- trunk/packages/insighttoolkit/trunk/debian/patches/itk4.10-correct_itkMathDetail_include-order.patch	2016-07-09 10:55:53 UTC (rev 22467)
+++ trunk/packages/insighttoolkit/trunk/debian/patches/itk4.10-correct_itkMathDetail_include-order.patch	2016-07-09 12:13:53 UTC (rev 22468)
@@ -1,3 +1,8 @@
+Description: Correct inclusion order to adhere to stricter parsing rules
+Author: Gert Wollny <gw.fossdev at gmail.com>
+Bug: https://issues.itk.org/jira/browse/ITK-3451
+Forwarded: http://review.source.kitware.com/#/c/21313/
+
 --- insighttoolkit4-4.10.0.obsolete.0.73584495794876/Modules/Core/Common/include/itkMathDetail.h	2016-05-26 17:32:22.000000000 +0200
 +++ insighttoolkit4-4.10.0/Modules/Core/Common/include/itkMathDetail.h	2016-07-06 15:58:30.820967520 +0200
 @@ -28,7 +28,7 @@

Modified: trunk/packages/insighttoolkit/trunk/debian/patches/itk4.10-enable-system-nifti.patch
===================================================================
--- trunk/packages/insighttoolkit/trunk/debian/patches/itk4.10-enable-system-nifti.patch	2016-07-09 10:55:53 UTC (rev 22467)
+++ trunk/packages/insighttoolkit/trunk/debian/patches/itk4.10-enable-system-nifti.patch	2016-07-09 12:13:53 UTC (rev 22468)
@@ -1,3 +1,8 @@
+Description: Use system NIFTI library
+Author: Gert Wollny
+Forwarded: No
+Last-Updated: 2016-07-09
+
 diff -ru insighttoolkit4-4.10.0.obsolete.0.73584495794876/Modules/ThirdParty/GIFTI/src/gifticlib/CMakeLists.txt insighttoolkit4-4.10.0/Modules/ThirdParty/GIFTI/src/gifticlib/CMakeLists.txt
 --- insighttoolkit4-4.10.0.obsolete.0.73584495794876/Modules/ThirdParty/GIFTI/src/gifticlib/CMakeLists.txt	2016-05-26 17:32:22.000000000 +0200
 +++ insighttoolkit4-4.10.0/Modules/ThirdParty/GIFTI/src/gifticlib/CMakeLists.txt	2016-07-06 16:10:33.255144401 +0200




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