[med-svn] r22581 - in trunk/packages/libgo-perl/trunk/debian: . patches
Tatiana Malygina
latticetower-guest at moszumanska.debian.org
Sun Jul 17 10:36:46 UTC 2016
Author: latticetower-guest
Date: 2016-07-17 10:36:46 +0000 (Sun, 17 Jul 2016)
New Revision: 22581
Added:
trunk/packages/libgo-perl/trunk/debian/patches/spelling2.patch
Modified:
trunk/packages/libgo-perl/trunk/debian/changelog
trunk/packages/libgo-perl/trunk/debian/patches/series
Log:
fixes remaining spelling warnings in man pages
Modified: trunk/packages/libgo-perl/trunk/debian/changelog
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/changelog 2016-07-17 10:14:35 UTC (rev 22580)
+++ trunk/packages/libgo-perl/trunk/debian/changelog 2016-07-17 10:36:46 UTC (rev 22581)
@@ -5,6 +5,7 @@
* add GO/Handlers/obj_yaml.pm and GO/Parsers/obj_yaml_parser.pm to
debian/tests/pkg-perl/syntax-skip
* add Andreas Tille's spelling patch
+ * fixed remaining spelling warnings in man pages
-- Tatiana Malygina <merlettaia at gmail.com> Sat, 16 Jul 2016 06:08:20 +0300
Modified: trunk/packages/libgo-perl/trunk/debian/patches/series
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/patches/series 2016-07-17 10:14:35 UTC (rev 22580)
+++ trunk/packages/libgo-perl/trunk/debian/patches/series 2016-07-17 10:36:46 UTC (rev 22581)
@@ -4,3 +4,4 @@
fix_test_xsltproc
fix_hash_in_go_io_dotty.patch
spelling.patch
+spelling2.patch
Added: trunk/packages/libgo-perl/trunk/debian/patches/spelling2.patch
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/patches/spelling2.patch (rev 0)
+++ trunk/packages/libgo-perl/trunk/debian/patches/spelling2.patch 2016-07-17 10:36:46 UTC (rev 22581)
@@ -0,0 +1,132 @@
+Author: Tatiana Malygina <merlettaia at gmail.com>
+Last-Update: 2016-07-17
+Description: fixes remaining spelling warnings in man pages
+
+--- a/GO/Model/Evidence.pm
++++ b/GO/Model/Evidence.pm
+@@ -246,7 +246,7 @@
+ Returns -
+ Args -
+
+-deprected - sets first pub_xref_list
++deprecated - sets first pub_xref_list
+
+ =cut
+
+--- a/GO/Model/GeneProduct.pm
++++ b/GO/Model/GeneProduct.pm
+@@ -16,7 +16,7 @@
+ =head1 DESCRIPTION
+
+ represents a gene product in a particular species (this will
+-effectively always be refered to implicitly by the gene symbol even
++effectively always be referred to implicitly by the gene symbol even
+ though a gene may have >1 product)
+
+ =cut
+--- a/GO/Model/GraphIterator.pm
++++ b/GO/Model/GraphIterator.pm
+@@ -86,7 +86,7 @@
+ Returns - bool
+ Args - bool
+
+-set this if you dont want relationships to be traversed twice;
++set this if you don't want relationships to be traversed twice;
+ this gives a more compact tree representation of the graph
+
+ =cut
+@@ -100,7 +100,7 @@
+ by default, all relationship types are treated as transitive, and will
+ be traversed by the iterator
+
+-sometimes you dont want to traverse all relations, even if they are
++sometimes you don't want to traverse all relations, even if they are
+ transitive. For example, when answering the query "find all genes
+ expressed in the embryo" you way want subtypes of embryo and parts of
+ the embryo but not things that develop_from the embryo.
+--- a/GO/Model/Root.pm
++++ b/GO/Model/Root.pm
+@@ -315,7 +315,7 @@
+ $name =~ s/.*://; # strip fully-qualified portion
+
+ if ($name eq "DESTROY") {
+- # we dont want to propagate this!!
++ # we don't want to propagate this!!
+ return;
+ }
+
+--- a/GO/Model/Seq.pm
++++ b/GO/Model/Seq.pm
+@@ -185,7 +185,7 @@
+ $name =~ s/.*://; # strip fully-qualified portion
+
+ if ($name eq "DESTROY") {
+- # we dont want to propagate this!!
++ # we don't want to propagate this!!
+ return;
+ }
+
+--- a/GO/Model/Species.pm
++++ b/GO/Model/Species.pm
+@@ -16,7 +16,7 @@
+ =head1 DESCRIPTION
+
+ represents a gene product in a particular species (this will
+-effectively always be refered to implicitly by the gene symbol even
++effectively always be referred to implicitly by the gene symbol even
+ though a gene may have >1 product)
+
+ =cut
+@@ -51,4 +51,3 @@
+ my $self = shift;
+ return ($self->genus || "")." ".($self->species || "");
+ }
+-
+--- a/GO/Model/Term.pm
++++ b/GO/Model/Term.pm
+@@ -685,10 +685,10 @@
+ $as2->gene_product->symbol;
+ }
+ elsif ($sortk eq "ev_code") {
+- confess("cant sort on evcode yet");
++ confess("can't sort on ev_code yet");
+ }
+ else {
+- confess("dont know $sortk");
++ confess("don't know $sortk");
+ }
+ }
+ $cmp;
+--- a/GO/Model/Xref.pm
++++ b/GO/Model/Xref.pm
+@@ -184,7 +184,7 @@
+ Returns - string
+ Args - indent [integer]
+
+-XML representation; you probably shouldnt call this directly, this
++XML representation; you probably shouldn't call this directly, this
+ will be called by entities that own xrefs
+
+ =cut
+--- a/GO/Parser.pm
++++ b/GO/Parser.pm
+@@ -246,7 +246,7 @@
+
+ the advantage of an event based parsing architecture is that it is
+ easy to build lightweight parsers, and heavy weight object models can
+-be bypassed if prefered.
++be bypassed if preferred.
+
+ =head2 EXAMPLES
+
+--- a/go-perl.pod
++++ b/go-perl.pod
+@@ -30,7 +30,7 @@
+ =head1 DESCRIPTION
+
+ go-perl is part of the go-dev code distribution. It is also available
+-as a seperate library in its own right.
++as a separate library in its own right.
+
+ go-perl is a collection of perl modules for working with ontologies
+ and data, in particular the Gene Ontology and other Open
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