[med-svn] [mummer] branch master created (now 39ae10b)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch master
in repository mummer.

        at  39ae10b   Moved packaging from SVN to Git

This branch includes the following new commits:

       new  fea63e3   Initial checkin (needs polishing!)
       new  abe72cb   Package builds, needs testing
       new  f995352   Moved the Homepage field, added the Vcs fields, fixed Steffen's address, removed the [Biology] tag and shortened the description of mummer-doc.
       new  41c5247   Added copyright for packaging
       new  fcc67b6   Tagged 3.20
       new  dcef51c   +XS-DM-Upload-Allowed: Yes
       new  4cab481   Added Charles' and Steffen's changes
       new  23be134   Tagged 3.20-2
       new  128e9ba   Fixing case mistake
       new  e0e508a   * Using DM-Upload-Allowed instead of XS-DM-Upload-Allowed * Added ?rev=0&sc=0 to Vcs-Browser fields * Sanitized Vcs-* fields
       new  6b53b05   Update to the latest doc-base policy.
       new  8500e29   Uploading as part of the Doc-Base transition.
       new  9727b60   Set MergeWithUpstream
       new  2b94367   Removed debian/mummer.dirs as it was creating empty directories.
       new  f4def59   New upstream release to prepare.
       new  7d57c82   New upstream release and patch eradication in progress…
       new  0703d71   Further efforts to build without pathes, but package is still broken for the moment.
       new  6f5ea67   Converted to Debhelper/Quilt as the peculiarities of the build system are not very suitable for CDBS.
       new  667efdb   Makes the patch easier to use with Quilt.
       new  8b3df4a   Could not work as the build target is not called with (fake)root privileges.
       new  2dbf79c   Spellcheck, finish debian/rules conversion, compliance with the Artistic license and better upstream tracking.
       new  7025c50   Inserted line break
       new  0d6b483   Patch headers compliant with DEP-3.
       new  855edbe   Deactivated patch, wrote debian/README.source and moved get-orig-source to debian/rules.
       new  07d8b80   Updated patch from Boyd Stephen Smith Jr.
       new  4473e68   New upstream release obsoleting debian/patches/01sm_src_tigr.diff.
       new  43f469e   s/Debian-Med/Debian Med
       new  e69fde2   Uploaded after final corrections.
       new  1a42321   Added Archive field, reformatted Reference field, renamed PubMed field.
       new  73b506b   Syntax corrections.
       new  c1b5326   I'm working on the "bin_dirs" issue offline and want to announce it this way. The patch does not finally fix the problem (just 7 cases out of 20)
       new  5da4605   Fix path problems in several scripts
       new  1704ec9   Make sure GZIP has option --best and --no-name
       new  df0e4e7   Renamed debian/upstream-metadata.yaml to debian/upstream.
       new  adeca60   Converted Debian copyright file to machine-readable format 1.0.
       new  2ad533d   Corrected Vcs URLs.
       new  f25647d   Refreshed (and corrected) the patch that links to PDFs on line.
       new  752ce66   New upstream release adding -D and --banded option to nucmer.
       new  a744c3e   Conforms to Policy 3.9.2
       new  3a3e788   Using Debhelper 8.
       new  596948b   Deleted FreeDesktop file as it is not installed.
       new  88375c6   Removed useless .dirs files.
       new  4c815c4   Moved PMID and DOI in the reference.
       new  4433ff4   Support DEB_BUILD_OPTIONS via Debhelper.
       new  4fd2a47   Use dpkg source format 3.0 (quilt) as a patch system.
       new  2ff32d1   Simplify debian/rules using dh.
       new  5b04288   Pass Dpkg build flags in CFLAGS.
       new  f2dc551   Uploaded mummer_3.23~dfsg-1_amd64.changes.
       new  6705dda   Add additional inital of one author from tasks file
       new  8de8c6d   Do not rebuild documentation PDF which is just stress testing autobuilders and would require patches for missing styles
       new  cf0620e   Do not build-depends from tetex any more; bumped standards-version
       new  5cfad25   Debhelper 9
       new  f02633b   Previous solution was wrong - there is no prebuilded PDF and we rather need to patch the source to enable building
       new  851d964   Revert previous changelog entry and upload to unstable
       new  535ab54   Move debian/upstream to debian/upstream/metadata
       new  e495105   Add some patches from mugsy enhancing functionality by adding two tools
       new  b19b3fd   Fix patches and add README.Debian about additional tools from mugsy
       new  2d49261   Manpage for additional tools
       new  09a81a7   cme fix dpkg-control
       new  906481d   Remove SF privacy breach script from docs
       new  4384ed6   Fix manpage syntax and add missing manpage
       new  7ca57c4   Propagate hardening options (+ fix spelling)
       new  0ae61b5   Add some patches from mugsy to include delta-filter -b for reporting duplications
       new  6b770ef   Add NEWS.Debian entry and upload to unstable
       new  9259d2d   add EDAM annotation
       new  422b414   Imported Upstream version 3.23~dfsg
       new  0e90861   Merge tag 'upstream/3.23_dfsg'
       new  b61be15   Re-add debian/ dir
       new  39ae10b   Moved packaging from SVN to Git

The 69 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/mummer.git