[med-svn] [python-pysam] branch master updated (b872a94 -> fca3a7d)

[Afif Elghraoui]

This is an automated email from the git hooks/post-receive script.

afif pushed a change to branch master
in repository python-pysam.

      from  b872a94   releasing package python-pysam version 0.9.1+ds-1
       new  6528922   Imported Upstream version 0.9.1.4+ds
       new  735a6d3   Merge tag 'upstream/0.9.1.4+ds'
       new  6d8e9e3   Drop patch applied upstream
       new  56b6f2f   Drop unused lintian overrides
       new  cd54fe4   Fix spelling issues (forwarded)
       new  fca3a7d   releasing package python-pysam version 0.9.1.4+ds-1

The 6 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
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Summary of changes:
 INSTALL                               |  12 +--
 MANIFEST.in                           |   4 +
 README.rst                            |  12 ++-
 cy_build.py                           |   7 +-
 debian/changelog                      |   9 ++
 debian/patches/external-htslib.patch  | 102 --------------------
 debian/patches/series                 |   2 +-
 debian/patches/spelling.patch         |  91 ++++++++++++++++++
 debian/python-pysam.lintian-overrides |   2 -
 pysam/calignmentfile.pyx              |  13 +--
 pysam/version.py                      |   2 +-
 run_tests_travis.sh                   |  46 ++++++++-
 setup.py                              | 169 ++++++++++++++++++++--------------
 tests/AlignmentFile_test.py           |  71 +++++++++++++-
 14 files changed, 342 insertions(+), 200 deletions(-)
 delete mode 100644 debian/patches/external-htslib.patch
 create mode 100644 debian/patches/spelling.patch

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