[med-svn] [metabit] 01/01: Update dependencies and todo

Andreas Tille tille at debian.org
Thu Jul 28 13:06:24 UTC 2016


This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository metabit.

commit 6b9dc5756a2bbc687c421945a667e1ad45e4da6b
Author: Andreas Tille <tille at debian.org>
Date:   Thu Jul 28 15:05:54 2016 +0200

    Update dependencies and todo
---
 debian/changelog | 4 ++--
 debian/control   | 4 +++-
 2 files changed, 5 insertions(+), 3 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index f076172..f770981 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -4,7 +4,7 @@ metabit (0.0+20160617-1) UNRELEASED; urgency=medium
 
   TODO:
      https://anonscm.debian.org/git/debian-med/python-lefse.git
-     https://github.com/marbl/Krona (see also https://github.com/marbl/Krona/wiki)
-
+     https://github.com/MikkelSchubert/adapterremoval
+     https://ginolhac.github.io/mapDamage/
 
  -- Andreas Tille <tille at debian.org>  Mon, 25 Jul 2016 14:09:29 +0200
diff --git a/debian/control b/debian/control
index afd6777..5ab713b 100644
--- a/debian/control
+++ b/debian/control
@@ -23,7 +23,9 @@ Depends: ${python:Depends},
          python-pysam,
          libpicard-java (>= 2.1.1+dfsg-1) | picard-tools (<= 1.113-1),
          samtools,
-         kronatools
+         kronatools,
+         bedtools,
+         mafft
 Description: analysing microbial profiles from high-throughput sequencing shotgun data
  MetaBIT is an integrative and automated metagenomic pipeline for
  analysing microbial profiles from high-throughput sequencing

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/metabit.git



More information about the debian-med-commit mailing list