[med-svn] r22238 - in trunk/packages/R: . r-cran-fields r-cran-fields/trunk r-cran-fields/trunk/debian r-cran-fields/trunk/debian/source r-cran-fields/trunk/debian/tests
Andreas Tille
tille at moszumanska.debian.org
Tue Jun 28 14:55:25 UTC 2016
Author: tille
Date: 2016-06-28 14:55:24 +0000 (Tue, 28 Jun 2016)
New Revision: 22238
Added:
trunk/packages/R/r-cran-fields/
trunk/packages/R/r-cran-fields/trunk/
trunk/packages/R/r-cran-fields/trunk/debian/
trunk/packages/R/r-cran-fields/trunk/debian/README.test
trunk/packages/R/r-cran-fields/trunk/debian/changelog
trunk/packages/R/r-cran-fields/trunk/debian/compat
trunk/packages/R/r-cran-fields/trunk/debian/control
trunk/packages/R/r-cran-fields/trunk/debian/copyright
trunk/packages/R/r-cran-fields/trunk/debian/docs
trunk/packages/R/r-cran-fields/trunk/debian/rules
trunk/packages/R/r-cran-fields/trunk/debian/source/
trunk/packages/R/r-cran-fields/trunk/debian/source/format
trunk/packages/R/r-cran-fields/trunk/debian/tests/
trunk/packages/R/r-cran-fields/trunk/debian/tests/control
trunk/packages/R/r-cran-fields/trunk/debian/tests/run-unit-test
trunk/packages/R/r-cran-fields/trunk/debian/watch
Log:
Inject r-cran-fields
Added: trunk/packages/R/r-cran-fields/trunk/debian/README.test
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/README.test (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/README.test 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1,8 @@
+Notes on how this package can be tested.
+────────────────────────────────────────
+
+To run the unit tests provided by the package you can do
+
+ sh run-unit-test
+
+in this directory.
Added: trunk/packages/R/r-cran-fields/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/changelog (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/changelog 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1,5 @@
+r-cran-fields (8.4-1-1) UNRELEASED; urgency=low
+
+ * Initial release (closes: #???)
+
+ -- Andreas Tille <tille at debian.org> Tue, 28 Jun 2016 16:10:42 +0200
Added: trunk/packages/R/r-cran-fields/trunk/debian/compat
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/compat (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/compat 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1 @@
+9
Added: trunk/packages/R/r-cran-fields/trunk/debian/control
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/control (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/control 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1,36 @@
+Source: r-cran-fields
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Andreas Tille <tille at debian.org>
+Section: gnu-r
+Priority: optional
+Build-Depends: debhelper (>= 9),
+ cdbs,
+ r-base-dev,
+ r-cran-spam,
+ r-cran-maps
+Standards-Version: 3.9.8
+Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-cran-fields/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-cran-fields/trunk/
+Homepage: https://cran.r-project.org/web/packages/fields
+
+Package: r-cran-fields
+Architecture: any
+Depends: ${shlibs:Depends},
+ ${misc:Depends},
+ ${R:Depends},
+ r-cran-spam,
+ r-cran-maps
+Description: GNU R tools for spatial data
+ For curve, surface and function fitting with an emphasis on splines,
+ spatial data and spatial statistics. The major methods include cubic,
+ and thin plate splines, Kriging and compact covariances for large data
+ sets. The splines and Kriging methods are supported by functions that
+ can determine the smoothing parameter (nugget and sill variance) and
+ other covariance parameters by cross validation and also by restricted
+ maximum likelihood. For Kriging there is an easy to use function that
+ also estimates the correlation scale (range). A major feature is that
+ any covariance function implemented in R and following a simple fields
+ format can be used for spatial prediction. There are also many useful
+ functions for plotting and working with spatial data as images. This
+ package also contains an implementation of sparse matrix methods for
+ large spatial data sets.
Added: trunk/packages/R/r-cran-fields/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/copyright (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/copyright 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1,30 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: fields
+Upstream-Contact: Douglas Nychka <nychka at ucar.edu>
+Source: https://cran.r-project.org/web/packages/fields
+
+Files: *
+Copyright: 2009-2016 Douglas Nychka, Reinhard Furrer, John Paige, Stephan Sain
+License: GPL-2+
+
+Files: debian/*
+Copyright: 2016 Andreas Tille <tille at debian.org>
+License: GPL-2+
+
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program; if not, write to the Free Software
+ Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+ .
+ On Debian systems, the complete text of the GNU General Public
+ License can be found in `/usr/share/common-licenses/GPL-2'.
Added: trunk/packages/R/r-cran-fields/trunk/debian/docs
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/docs (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/docs 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1,3 @@
+debian/README.test
+debian/tests/run-unit-test
+tests
Added: trunk/packages/R/r-cran-fields/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/rules (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/rules 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1,3 @@
+#!/usr/bin/make -f
+
+include /usr/share/R/debian/r-cran.mk
Property changes on: trunk/packages/R/r-cran-fields/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
+ *
Added: trunk/packages/R/r-cran-fields/trunk/debian/source/format
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/source/format (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/source/format 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1 @@
+3.0 (quilt)
Added: trunk/packages/R/r-cran-fields/trunk/debian/tests/control
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/tests/control (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/tests/control 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1,3 @@
+Tests: run-unit-test
+Depends: @, r-cran-runit
+Restrictions: allow-stderr
Added: trunk/packages/R/r-cran-fields/trunk/debian/tests/run-unit-test
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/tests/run-unit-test (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/tests/run-unit-test 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1,38 @@
+#!/bin/sh -e
+
+pkg=r-cran-fields
+
+# The saved result files do contain some differences in metadata and we also
+# need to ignore version differences of R
+filter() {
+ grep -v -e '^R version' \
+ -e '^Copyright (C)' \
+ -e '^R : Copyright 20' \
+ -e '^Version 2.0' \
+ -e '^Platform:' \
+ -e '^Spam version .* is loaded.' \
+ $1 | \
+ sed -e '/^> *proc\.time()$/,$d'
+}
+
+if [ "$ADTTMP" = "" ] ; then
+ ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
+fi
+cd $ADTTMP
+cp /usr/share/doc/${pkg}/tests/* $ADTTMP
+gunzip *.gz
+for htest in `ls *.R | sed 's/\.R$//'` ; do
+ LC_ALL=C R --no-save < ${htest}.R 2>&1 | tee > ${htest}.Rout
+ filter ${htest}.Rout.save > ${htest}.Rout.save_
+ filter ${htest}.Rout > ${htest}.Rout_
+ diff -u --ignore-all-space ${htest}.Rout.save_ ${htest}.Rout_
+ if [ ! $? ] ; then
+ echo "Test ${htest} failed"
+ exit 1
+ else
+ echo "Test ${htest} passed"
+ fi
+done
+rm -f $ADTTMP/*
+
+exit 0
Added: trunk/packages/R/r-cran-fields/trunk/debian/watch
===================================================================
--- trunk/packages/R/r-cran-fields/trunk/debian/watch (rev 0)
+++ trunk/packages/R/r-cran-fields/trunk/debian/watch 2016-06-28 14:55:24 UTC (rev 22238)
@@ -0,0 +1,2 @@
+version=3
+http://cran.r-project.org/src/contrib/fields_([-\d.]*)\.tar\.gz
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