[med-svn] [canu] 03/06: Write up copyrights

[Afif Elghraoui]

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afif pushed a commit to branch master
in repository canu.

commit 369ec01a59bf9a7cd699fd8b1fcd3087c3ab3702
Author: Afif Elghraoui <afif at debian.org>
Date:   Sun Oct 9 21:44:33 2016 -0700

    Write up copyrights
---
 debian/copyright | 114 +++++++++++++++++++++++++++++++++++++++++++++++++++++--
 1 file changed, 111 insertions(+), 3 deletions(-)

diff --git a/debian/copyright b/debian/copyright
index 88fb7c3..810a8ac 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -10,14 +10,121 @@ Files-Excluded:
 	src/pipelines/*.tar.gz
 
 Files: *
-Copyright: <years> <put author's name and email here>
-           <years> <likewise for another author>
-License: GPL-2.0+
+Copyright:
+	2011-2012,2014-2015 Battelle National Biodefense Institute
+	2011 Liliana Florea
+	2005-2014 J. Craig Venter Institute
+	2004 Brian P. Walenz
+	2003-2004 Applera Corporation
+License: GPL-2.0+ and BSD-3-Clause-BNBI and Public-Domain
+Comment:
+ Modifications made by the Battelle National Biodefense Institute are licensed
+ under the BSD-3-Clause-BNBI license. Developments from 2016 onward are
+ public domain works.
+
+Files: src/utgcns/*
+       src/falcon_sense/*
+Copyright: 2011-2015 Pacific Biosciences of California
+License: BSD-3-Clause-PacBio
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted (subject to the limitations in the
+ disclaimer below) provided that the following conditions are met:
+ * Redistributions of source code must retain the above copyright
+   notice, this list of conditions and the following disclaimer.
+ * Redistributions in binary form must reproduce the above
+   copyright notice, this list of conditions and the following
+   disclaimer in the documentation and/or other materials provided
+   with the distribution.
+ * Neither the name of Pacific Biosciences nor the names of its
+   contributors may be used to endorse or promote products derived
+   from this software without specific prior written permission.
+ .
+ NO EXPRESS OR IMPLIED LICENSES TO ANY PARTY'S PATENT RIGHTS ARE
+ GRANTED BY THIS LICENSE. THIS SOFTWARE IS PROVIDED BY PACIFIC
+ BIOSCIENCES AND ITS CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED
+ WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES
+ OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+ DISCLAIMED. IN NO EVENT SHALL PACIFIC BIOSCIENCES OR ITS
+ CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
+ SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
+ LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF
+ USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
+ ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+ OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT
+ OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
+ SUCH DAMAGE.
+
+Files: src/AS_UTL/md5.C
+Copyright: 1991-1992 RSA Data Security, Inc.
+License: RSA
+ License to copy and use this software is granted provided that it
+ is identified as the "RSA Data Security, Inc. MD5 Message-Digest
+ Algorithm" in all material mentioning or referencing this software
+ or this function.
+ .
+ License is also granted to make and use derivative works provided
+ that such works are identified as "derived from the RSA Data
+ Security, Inc. MD5 Message-Digest Algorithm" in all material
+ mentioning or referencing the derived work.
+ .
+ RSA Data Security, Inc. makes no representations concerning either
+ the merchantability of this software or the suitability of this
+ software for any particular purpose. It is provided "as is"
+ without express or implied warranty of any kind.
+ .
+ These notices must be retained in any copies of any part of this
+ documentation and/or software.
 
 Files: debian/*
 Copyright: 2016 Afif Elghraoui <afif at debian.org>
 License: GPL-2.0+
 
+License: Public-Domain
+ This software is "United States Government Work" under the terms of the United
+ States Copyright Act. It was written as part of the authors' official duties
+ for the United States Government and thus cannot be copyrighted. This software
+ is freely available to the public for use without a copyright
+ notice. Restrictions cannot be placed on its present or future use.
+ .
+ Although all reasonable efforts have been taken to ensure the accuracy and
+ reliability of the software and associated data, the National Human Genome
+ Research Institute (NHGRI), National Institutes of Health (NIH) and the
+ U.S. Government do not and cannot warrant the performance or results that may
+ be obtained by using this software or data. NHGRI, NIH and the U.S. Government
+ disclaim all warranties as to performance, merchantability or fitness for any
+ particular purpose.
+ .
+ Please cite the authors in any work or product based on this material.
+
+License: BSD-3-Clause-BNBI
+ This Software was prepared for the Department of Homeland Security (DHS) by the
+ Battelle National Biodefense Institute, LLC (BNBI) as part of contract
+ HSHQDC-07-C-00020 to manage and operate the National Biodefense Analysis and
+ Countermeasures Center (NBACC), a Federally Funded Research and Development
+ Center.
+ .
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted provided that the following conditions are met:
+ * Redistributions of source code must retain the above copyright notice, this
+   list of conditions and the following disclaimer.
+ * Redistributions in binary form must reproduce the above copyright notice,
+   this list of conditions and the following disclaimer in the documentation
+   and/or other materials provided with the distribution.
+ * Neither the name of the Battelle National Biodefense Institute nor the names
+   of its contributors may be used to endorse or promote products derived from
+   this software without specific prior written permission.
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+ AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+ DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+ FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+ DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+ CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+ OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
 License: GPL-2.0+
  This package is free software; you can redistribute it and/or modify
  it under the terms of the GNU General Public License as published by
@@ -34,3 +141,4 @@ License: GPL-2.0+
  .
  On Debian systems, the complete text of the GNU General
  Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
+

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