[med-svn] [daligner] branch master updated (47ddfce -> a3c1e76)

[Afif Elghraoui]

This is an automated email from the git hooks/post-receive script.

afif pushed a change to branch master
in repository daligner.

      from  47ddfce   daligner (1.0+20151214-1) unstable; urgency=medium
       new  3e9ce55   Imported Upstream version 1.0+20160927
       new  a3c1e76   Merge tag 'upstream/1.0+20160927'

The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 DB.c                    |   86 ++-
 DB.h                    |   28 +-
 HPC.daligner.c          | 1399 +++++++++++++++++++++++++++++++++++++++++++++++
 HPCdaligner.c           |  543 ------------------
 HPCmapper.c             |  591 --------------------
 LAcat.c                 |   53 +-
 LAcheck.c               |   95 +++-
 LAdump.c                |   13 +-
 LAmerge.c               |   58 +-
 LAshow.c                |   78 ++-
 LAsort.c                |   83 ++-
 LAsplit.c               |   51 +-
 LAupgrade.Dec.31.2014.c |  153 ------
 Makefile                |   15 +-
 QV.c                    |   56 +-
 QV.h                    |   18 +-
 README                  |  395 -------------
 README.md               |  506 +++++++++++++++++
 align.c                 |  165 ++++--
 align.h                 |   23 +-
 daligner.c              |  102 +++-
 filter.c                |  348 +++++++-----
 filter.h                |    5 +-
 23 files changed, 2801 insertions(+), 2063 deletions(-)
 create mode 100644 HPC.daligner.c
 delete mode 100644 HPCdaligner.c
 delete mode 100644 HPCmapper.c
 delete mode 100644 LAupgrade.Dec.31.2014.c
 delete mode 100644 README
 create mode 100644 README.md

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