[med-svn] [dazzdb] 02/10: Merge tag 'upstream/1.0+20160930'

[Afif Elghraoui]

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afif pushed a commit to branch master
in repository dazzdb.

commit e72c26ae19cc72ddf6743ad679c16e80ad53dab1
Merge: 080d83f f9c46a1
Author: Afif Elghraoui <afif at debian.org>
Date:   Tue Oct 11 21:24:48 2016 -0700

    Merge tag 'upstream/1.0+20160930'
    
    Upstream version 1.0+20160930

 Catrack.c                |  57 ++---
 DAM2fasta.c              |  60 ++----
 DB.c                     | 284 ++++++++++++++++++------
 DB.h                     |  78 +++----
 DB2fasta.c               | 108 +++++-----
 DB2quiva.c               |  97 ++++-----
 DBshow.c => DBdump.c     | 504 +++++++++++++++++++++++++++++--------------
 DBdust.c                 |  39 +---
 DBrm.c                   |  37 ----
 DBshow.c                 |  55 +----
 DBsplit.c                |  68 ++----
 DBstats.c                | 178 +++++++--------
 DBupgrade.Dec.31.2014.c  | 115 ----------
 DBupgrade.Sep.25.2014.c  | 125 -----------
 DUSTupgrade.Jan.1.2015.c | 117 ----------
 LICENSE                  |  34 +++
 Makefile                 |  28 ++-
 QV.c                     |  93 ++++----
 QV.h                     |  55 ++---
 README                   | 442 --------------------------------------
 README.md                | 501 +++++++++++++++++++++++++++++++++++++++++++
 fasta2DAM.c              | 477 ++++++++++++++++++++++++++++++-----------
 fasta2DB.c               | 290 +++++++++++++++----------
 quiva2DB.c               | 546 +++++++++++++++++++++++++++++------------------
 rangen.c                 | 182 ++++++++++++++++
 simulator.c              | 473 ++++++++++++++++++++++++----------------
 26 files changed, 2771 insertions(+), 2272 deletions(-)

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