[med-svn] [aragorn] 04/05: add spelling patch

[Sascha Steinbiss]

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satta pushed a commit to branch master
in repository aragorn.

commit cc6a1c2d9ea9a85e418bea61cf16f91271c53726
Author: Sascha Steinbiss <satta at debian.org>
Date:   Wed Oct 12 09:10:15 2016 +0000

    add spelling patch
---
 debian/patches/spelling | 51 +++++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 51 insertions(+)

diff --git a/debian/patches/spelling b/debian/patches/spelling
new file mode 100644
index 0000000..e816863
--- /dev/null
+++ b/debian/patches/spelling
@@ -0,0 +1,51 @@
+Description: fix spelling
+Author: Sascha Steinbiss <satta at debian.org>
+--- a/aragorn.1
++++ b/aragorn.1
+@@ -53,7 +53,7 @@
+ Search for Metazoan mitochondrial tRNA genes\&. tRNA genes with introns not detected\&.
+ \fB\-i\fR,
+ \fB\-sr\fR
+-switchs ignored\&. Composite Metazoan mitochondrial genetic code used\&.
++switches ignored\&. Composite Metazoan mitochondrial genetic code used\&.
+ .RE
+ .PP
+ \fB\-mtmam\fR
+@@ -61,7 +61,7 @@
+ Search for Mammalian mitochondrial tRNA genes\&.
+ \fB\-i\fR,
+ \fB\-sr\fR
+-switchs ignored\&.
++switches ignored\&.
+ \fB\-tv\fR
+ switch set\&. Mammalian mitochondrial genetic code used\&.
+ .RE
+@@ -362,7 +362,7 @@
+ .PP
+ \fB\-q\fR
+ .RS 4
+-Dont print configuration line (which switchs and files were used)\&.
++Do not print configuration line (which switches and files were used)\&.
+ .RE
+ .PP
+ \fB\-rn\fR
+--- a/aragorn1.2.38.c
++++ b/aragorn1.2.38.c
+@@ -1624,7 +1624,7 @@
+ "                  -m or -t is specified, then the other", 
+ "                  is not detected unless specified as well.",
+ "    -mt           Search for Metazoan mitochondrial tRNA genes.",
+-"                  tRNA genes with introns not detected. -i,-sr switchs",
++"                  tRNA genes with introns not detected. -i,-sr switches",
+ "                  ignored. Composite Metazoan mitochondrial",
+ "                  genetic code used.",
+ "    -mtmam        Search for Mammalian mitochondrial tRNA",
+@@ -1736,7 +1736,7 @@
+ "                  <num> bases when searching GENBANK files. Default is 10 bases.",
+ "    -amm<num>     Change annotated tmRNA length mismatch reporting threshold to",
+ "                  <num> bases when searching GENBANK files. Default is 30 bases.",
+-"    -q            Dont print configuration line (which switches",
++"    -q            Do not print configuration line (which switches",
+ "                  and files were used).",
+ "    -rn           Repeat sequence name before summary information.",
+ "    -o <outfile>  Print output to <outfile>. If <outfile>",

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