[med-svn] [plink1.9] 02/02: Merge tag 'upstream/1.90_b3.43-161010'

[Dylan Aïssi]

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bob.dybian-guest pushed a commit to branch master
in repository plink1.9.

commit 8aa6e00aa07cce40a21cdf893095cea8cec4e386
Merge: 96d83fa 96b85b5
Author: Dylan Aïssi <bob.dybian at gmail.com>
Date:   Sun Oct 23 23:52:48 2016 +0200

    Merge tag 'upstream/1.90_b3.43-161010'
    
    Upstream version 1.90~b3.43-161010

 bgzf.c          |  2 ++
 plink.c         | 15 ++++++++-------
 plink_assoc.c   | 30 ++++++++++++++++++++++++++----
 plink_assoc.h   | 17 +++++++++++++++++
 plink_calc.c    | 17 +++++++++++++++++
 plink_cluster.c | 19 +++++++++++++++++++
 plink_cnv.c     | 17 +++++++++++++++++
 plink_cnv.h     | 17 +++++++++++++++++
 plink_common.c  | 17 +++++++++++++++++
 plink_common.h  | 37 +++++++++++++++++++++++++++++--------
 plink_data.c    | 37 ++++++++++++++++++++++---------------
 plink_data.h    | 17 +++++++++++++++++
 plink_dosage.c  | 17 +++++++++++++++++
 plink_dosage.h  | 17 +++++++++++++++++
 plink_family.c  | 19 ++++++++++++++++++-
 plink_family.h  | 17 +++++++++++++++++
 plink_filter.c  | 35 ++++++++++++++++++++++++-----------
 plink_filter.h  | 17 +++++++++++++++++
 plink_glm.c     | 25 +++++++++++++++++++++----
 plink_glm.h     | 17 +++++++++++++++++
 plink_help.c    | 19 ++++++++++++++++++-
 plink_help.h    | 17 +++++++++++++++++
 plink_homozyg.c | 18 ++++++++++++++++++
 plink_homozyg.h | 17 +++++++++++++++++
 plink_lasso.c   | 17 +++++++++++++++++
 plink_lasso.h   | 17 +++++++++++++++++
 plink_ld.c      | 35 +++++++++++++++++++++++++++++++----
 plink_ld.h      | 17 +++++++++++++++++
 plink_matrix.c  | 17 +++++++++++++++++
 plink_matrix.h  | 17 +++++++++++++++++
 plink_misc.c    | 18 ++++++++++++++++++
 plink_misc.h    | 17 +++++++++++++++++
 plink_perm.c    | 17 +++++++++++++++++
 plink_perm.h    | 17 +++++++++++++++++
 plink_rserve.c  | 17 +++++++++++++++++
 plink_rserve.h  | 17 +++++++++++++++++
 plink_set.c     | 17 +++++++++++++++++
 plink_set.h     | 17 +++++++++++++++++
 plink_stats.c   | 21 +++++++++++++++++++--
 plink_stats.h   | 17 +++++++++++++++++
 40 files changed, 715 insertions(+), 57 deletions(-)

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