[med-svn] r22901 - trunk/packages/R/r-bioc-affyio/trunk/debian

[Andreas Tille]

Author: tille
Date: 2016-10-26 12:28:03 +0000 (Wed, 26 Oct 2016)
New Revision: 22901

Modified:
   trunk/packages/R/r-bioc-affyio/trunk/debian/changelog
   trunk/packages/R/r-bioc-affyio/trunk/debian/control
   trunk/packages/R/r-bioc-affyio/trunk/debian/copyright
   trunk/packages/R/r-bioc-affyio/trunk/debian/rules
Log:
  * New upstream version
  * Convert to dh-r
  * Generic BioConductor homepage



Modified: trunk/packages/R/r-bioc-affyio/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-affyio/trunk/debian/changelog	2016-10-26 12:12:47 UTC (rev 22900)
+++ trunk/packages/R/r-bioc-affyio/trunk/debian/changelog	2016-10-26 12:28:03 UTC (rev 22901)
@@ -1,3 +1,11 @@
+r-bioc-affyio (1.44.0-1) unstable; urgency=medium
+
+  * New upstream version
+  * Convert to dh-r
+  * Generic BioConductor homepage
+
+ -- Andreas Tille <tille at debian.org>  Wed, 26 Oct 2016 14:17:11 +0200
+
 r-bioc-affyio (1.42.0-1) unstable; urgency=medium
 
   * New upstream version

Modified: trunk/packages/R/r-bioc-affyio/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-affyio/trunk/debian/control	2016-10-26 12:12:47 UTC (rev 22900)
+++ trunk/packages/R/r-bioc-affyio/trunk/debian/control	2016-10-26 12:28:03 UTC (rev 22901)
@@ -4,19 +4,21 @@
 Section: gnu-r
 Priority: optional
 Build-Depends: debhelper (>= 9),
-               cdbs,
+               dh-r,
                zlib1g-dev,
                r-base-dev
 Standards-Version: 3.9.8
 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-affyio/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-affyio/trunk/
-Homepage: http://bioconductor.org/packages/release/bioc/html/affyio.html
+Homepage: https://bioconductor.org/packages/affyio/
 
 Package: r-bioc-affyio
 Architecture: any
 Depends: ${R:Depends},
          ${shlibs:Depends},
          ${misc:Depends}
+Recommends: ${R:Recommends}
+Suggests: ${R:Suggests}
 Description: BioConductor tools for parsing Affymetrix data files
  This BioConductor package provides routines for parsing Affymetrix data
  files based upon file format information. Primary focus is on accessing

Modified: trunk/packages/R/r-bioc-affyio/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-affyio/trunk/debian/copyright	2016-10-26 12:12:47 UTC (rev 22900)
+++ trunk/packages/R/r-bioc-affyio/trunk/debian/copyright	2016-10-26 12:28:03 UTC (rev 22901)
@@ -1,14 +1,14 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: affyio
-Upstream-Contact: Benjamin Milo Bolstad <bmb at bmbolstad.com>
-Source: http://www.bioconductor.org/packages/release/bioc/html/affyio.html
+Upstream-Contact: Benjamin Milo Bolstad <bmb at bmbolstad.com>
+Source: https://bioconductor.org/packages/affyio/
 
 Files: *
-Copyright: © 2006-2013 Benjamin Milo Bolstad <bmb at bmbolstad.com>
+Copyright: © 2006-2016 Benjamin Milo Bolstad <bmb at bmbolstad.com>
 License: LGPL-2.1+
 
 Files: debian/*
-Copyright: 2013 Andreas Tille <tille at debian.org>
+Copyright: 2013-2016 Andreas Tille <tille at debian.org>
 License: LGPL-2.1+
 
 License: LGPL-2.1+

Modified: trunk/packages/R/r-bioc-affyio/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-bioc-affyio/trunk/debian/rules	2016-10-26 12:12:47 UTC (rev 22900)
+++ trunk/packages/R/r-bioc-affyio/trunk/debian/rules	2016-10-26 12:28:03 UTC (rev 22901)
@@ -1,7 +1,4 @@
 #!/usr/bin/make -f
 
-debRreposname=bioc
-include /usr/share/R/debian/r-cran.mk
-
-install/$(package)::
-	rm -rf debian/$(package)/usr/lib/R/site-library/$(cranName)/LICENSE
+%:
+	dh $@ --buildsystem R