[med-svn] [sim4] 01/01: autopkgtests added
Canberk Koç
cbk-guest at moszumanska.debian.org
Wed Oct 26 23:45:19 UTC 2016
This is an automated email from the git hooks/post-receive script.
cbk-guest pushed a commit to branch master
in repository sim4.
commit 0d9051a0b9ec1632c6eeb021d7e02bebeacc39b4
Author: Canberk Koç <canberkkoc at gmail.com>
Date: Thu Oct 27 02:45:09 2016 +0300
autopkgtests added
---
debian/changelog | 7 +++++++
debian/sim4-examples/sample.cdna.fasta | 20 ++++++++++++++++++++
debian/sim4-examples/sample.gen.fasta | 20 ++++++++++++++++++++
debian/sim4.examples | 1 +
debian/tests/control | 3 +++
debian/tests/run-unit-test | 28 ++++++++++++++++++++++++++++
6 files changed, 79 insertions(+)
diff --git a/debian/changelog b/debian/changelog
index e6aec69..daf086d 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+sim4 (0.0.20121010-4) UNRELEASED; urgency=medium
+
+ * Team upload.
+ * Autopkgtests added
+
+ -- Canberk Koç <canberkkoc at gmail.com> Thu, 27 Oct 2016 02:44:08 +0300
+
sim4 (0.0.20121010-3) unstable; urgency=medium
[ Andreas Tille ]
diff --git a/debian/sim4-examples/sample.cdna.fasta b/debian/sim4-examples/sample.cdna.fasta
new file mode 100644
index 0000000..25883e4
--- /dev/null
+++ b/debian/sim4-examples/sample.cdna.fasta
@@ -0,0 +1,20 @@
+>gi|74316016|ref|NM_026831.1| Mus musculus myosin binding protein H-like (Mybphl), mRNA
+GTGACCCCAGGGAGACCAGCCTGGACAGCAGGTGCACAGCCCCTCCCTCACCAGCAACAAAGAAAATTTTCAGCTAGACCCCAGGCATGGAGACAGCCACCACACTGGAGATAGCCTCATGCTCCCAGCGGCAGGTAGAAGCAGCTGCTGACCCAGCGGATGCTAAAGGACCCCGGACTTCACATCAACAGGAGGCAGGCAGCCCTTCTCTGCAGCTCCTGCCCTCTATTGAAGAGCACCCCAAGATCTGGCTACCTCGGGCCCTGAAGCAGACTTACATCCGGAAGGCTGGGGAGACAGTGAATCTACTAATCCCGATCCAGGGTAAGCCCAAACCTCAAACCACCTGGACTCACAATGGCTGTGCCCTGGACAGCAGCCGTGTCAGCGTGCGGAATGGGGAGCATGACTCTATTCTTTTCATCAGAGAGGCCCAACGCACTGACTCAGGATGCTACCAACTCTGTGTGCAGCTCGGTGGGCTGCAGGCCA [...]
+>gi|33859764|ref|NM_080469.2| Mus musculus prion protein interacting protein 1 (Prnpip1), mRNA
+GCTGCCGTCAACTGCCCGGAGCGTCTGCTGAGGCCGAGGGAGACGCCGGGGCCTGCACCTGGAGAGAGCCTGCCGTGCTGGCCCGGAGGAGGGGGCGTTGCCATGGCGACAGCCTCTCCGGCAGCTGACGGGGGGCGGGGGCGGCCCTGGGAAGGAGGGCTGGTCTCCTGGCCCCCTGCCCCTCCCCTTACGCTTCCCTGGACCTGGATGGGCCCGAGCTGGGGGCAACACCCTGGGCATTGGGGCTTTCCAGCTCTCACAGACCCTTCAGCATCTCCAGCTGCCAGTCTTGGCATCTTCGAAGTAAGGAGAGTTTTAGATGCCTCTGGATGTTCAATGCTAGCGCCGTTACAGACGGGAGCGGCTCGGTTCTCTTCATATTTACTTTCAAGAGCAAGAAAAGTGCTGGGCTCCCACTTGTTATCTCCCTGTGGCGTTCCGGAGCTCTGTTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCG [...]
+>gi|115334670|ref|NM_019993.3| Mus musculus aldehyde dehydrogenase 9, subfamily A1 (Aldh9a1), mRNA
+GACTGTCCCTTCCTCCCAGTGGGCTCTACTGGGCTCTCCTTGAGGGCCCCGGGTCTTCACACTCACGGTCCACACCTCCCCGAGGTCCTGTTCCCTAGTGGTCCACCCCTGCCCAGCCAGGGTCGCCTCTTTCCATGGGCCACGCCCCAGAGATTCCGCCCCTCGCCACTCCCTCCTCGTTACCGCGCTATCTCCCCCTCCAGTAGTAATCTGCTGGGGCTTCCGGACGCTTTGCACGCGTAGCAGATGATCCTCGGTGCAGTCGGTTCTGTGCTGACCTCGCTCCTCCGCATTCACCGGGCTGCAGCAGTCGCCGCCATGAGTACTGGCACCTTCGTCGTGTCGCAGCCGCTCAACTACCGCGGCGGGGCCCGTGTGGAGCCGGTGGATGCTTCCGGCACGGAGAAAGCGTTCGAGCCAGCCACCGGCCGAGTGATTGCCACTTTCGCGTGTTCAGGAGAAAAGGAAGTAAACTTGGCCGTTGAGAATGCA [...]
+>gi|6754317|ref|NM_010548.1| Mus musculus interleukin 10 (Il10), mRNA
+GGGGGGGGGGATTTAGAGACTTGCTCTTGCACTACCAAAGCCACAAAGCAGCCTTGCAGAAAAGAGAGCTCCATCATGCCTGGCTCAGCACTGCTATGCTGCCTGCTCTTACTGACTGGCATGAGGATCAGCAGGGGCCAGTACAGCCGGGAAGACAATAACTGCACCCACTTCCCAGTCGGCCAGAGCCACATGCTCCTAGAGCTGCGGACTGCCTTCAGCCAGGTGAAGACTTTCTTTCAAACAAAGGACCAGCTGGACAACATACTGCTAACCGACTCCTTAATGCAGGACTTTAAGGGTTACTTGGGTTGCCAAGCCTTATCGGAAATGATCCAGTTTTACCTGGTAGAAGTGATGCCCCAGGCAGAGAAGCATGGCCCAGAAATCAAGGAGCATTTGAATTCCCTGGGTGAGAAGCTGAAGACCCTCAGGATGCGGCTGAGGCGCTGTCATCGATTTCTCCCCTGTGAAAATAAGAGCAAGGCAGTG [...]
+>gi|27883843|ref|NM_009227.1| Mus musculus small nuclear ribonucleoprotein E (Snrpe), mRNA
+GTTTCCGAGGCGGCCTTCCTACTCGTGTGGTCTTTGTGACTTCCACCATGGCGTACCGCGGCCAGGGCCAAAAGGTGCAGAAGGTGATGGTGCAGCCCATCAACCTTATCTTCAGATACTTGCAAAATAGATCTCGAATTCAGGTGTGGCTGTATGAACAAGTGAATATGCGGATAGAAGGTTGTATTATTGGCTTTGATGAGTACATGAACCTCGTATTAGATGATGCAGAAGAGATTCATTCTAAAACAAAGTCAAGAAAACAACTGGGTCGGATCATGCTAAAAGGAGATAATATTACTCTGCTCCAAAGTGTTTCCAACTAGCAGTGAATGGTGAAGTCTGTAGGATGTTGAGAAGACCCCTTGAGCGTGTTTAAAGATGTCTGCTGCAACCTGCATTTACTCAACTTGTTTTACTTGCACATTATTATTAGGTGACAATAAATGCTGTAGGAAGTTTTTGC
+>gi|31982203|ref|NM_008546.2| Mus musculus microfibrillar-associated protein 2 (Mfap2), mRNA
+AGCGCAGAGGCCCCAACAGCTGTCCTCAACGCCACCACCGCCTCCTCACTCCATGGCCATGAGAGCCGCCTGCCTCTTCCTGCTGTTCATGCCTGGCCTGCTGGCTCAGGGCCAATATGACCTGGATCCTCTCCCCCCATTCCCGGACCATGTCCAGTACAACCACTATGGCGACCAGATTGACAACGCAGACTACTATGACTACCAAGAAGTGAGTCCTCGGACCCCTGAAGAGCAGTTCCAGTCCCAGCAGCAAGTTCAACAGGAAGTCATCCCAGCCCCTACCCCAGAACCAGCAGCTGCAGGGGACCTGGAGACTGAGCCTACCGAGCCTGGCCCTCTTGACTGCCGCGAAGAACAGTACCCGTGTACCCGCCTCTACTCCATCCACAAGCCTTGCAAACAGTGTCTCAACGAGGTCTGCTTCTACAGCCTCCGCCGAGTGTATGTGGTCAACAAGGAAATATGTGTCCGCACTGTCTGTGCCCACGA [...]
+>gi|21314853|ref|NM_139304.1| Mus musculus GATA zinc finger domain containing 2B (Gatad2b), mRNA
+AACGCCAGGATGGATAGAATGACAGAAGATGCTCTGCGCCTGAATCTTTTGAAGAGGAGTTTGGACCCAGCAGATGAGCGAGATGATGTTCTGGCAAAACGACTGAAAATGGAGGGGCATGAGGCCATGGAACGGCTGAAAATGTTAGCACTGCTCAAAAGGAAAGATTTGGCAAATCTTGAGGTGCCGCATGAGTTACCTACTAAGCAAGATGGCAGTGGTGTCAAGGGTTATGAAGAGAAACTTAATGGAAATCTCAGGCCTCATGGAGACAACAACAGGACTGCTGGAAGGCCCGGCAAAGAAAACATCAATGATGAGCCTGTGGATATGAGTGCTAGACGGAGTGAGCCAGACCGAGGAAGGCTAACTCCTTCCCCAGACATAATTGTTTTGTCTGATAATGAGGCCTCCAGTCCCCGATCCAGCTCCCGGATGGAAGAGAGACTCAAAGCAGCCAACCTAGAGATGTTTAAGGGGAAAGGCATGGAG [...]
+>gi|31981052|ref|NM_019777.2| Mus musculus inhibitor of kappaB kinase epsilon (Ikbke), mRNA
+GGAGGAAGTATGATAGTTAAGAGCCTGGGACTGGGTACCCCACTGCTCTCAGAGAGGCAGGAAAGAGACCTTCAGGCTCAAGACCATCACCTGCTTTGCCTGTGGATCCTGGGGGGCCCCATAGCTACCAGGATCTTCTAGGCACTGCCCAGGATTGACTTCAAGGCCTGAATCCCTGGGGGTGCCACCCAGTTCCACAAGTCTGCATTGCCCTGCAACTGAGATAGGAGATGGGCTCAGCTCCTGGACTTGCCCCAGACAGAAAGCAAAACACACACTTGCCAGGGAGAGTCTTTGCCTGATTCTGAGCCACTTGGAGTGCAGGAAGAAGATAGCCAAGCCCAGGAGATGCAGAGTACCACTAACTACCTGTGGCATACTGATGACCTGCTAGGGCAGGGGGCCACTGCCAGTGTGTACAAGGCCCGAAACAAGAAATCCGGGGAGGTGGTTGCTGTAAAGGTCTTCAACTCAGCCAGCTATCGGCGACCT [...]
+>gi|31982176|ref|NM_175259.3| Mus musculus transmembrane protein 58 (Tmem58), mRNA
+GCGGGCTGGGCGGTGCTGCAGCTCCCGCCGGCCGGCTTCGTCCAGCTTTGTCCTGCGGCCCCTTTTCCAGGCCGTCCTGGCCGCGCCCAGCCCCCTCTCGCCATGCCGCCCGCCGGGCCCCGCGGGACCGCGCCGCTCGCAGCCGTCGTCCTGCTGGTGCTTGGGGCTCCTCTGGCGCTGGCGAGTGAGGACTGCTTGTGGTATCTGGACCGGAATGGCTCCTGGCATCCGGGATTTGACTGCGAGTTCTTCACCTTCTGCTGCGGGACCTGCTACCAGCGGTACTGCTGCAGGGACCTGACCTTACTCATCACCGAGAGACAGCAGAAACACTGCCTGGCCTTCAGTCCCAAGACCATAGCAGGCATCGCCTCTGCTGTAATCCTCTTTGTTGCTGTGGTTGCCACCACCATCTGCTGCTTCCTCTGTTCCTGTTGTTACCTATACCGAAGGCGCCAGCAGCTCCAGAGCACGTTTGAAGGCCAGGAGATT [...]
+>gi|23956081|ref|NM_016980.1| Mus musculus ribosomal protein L5 (Rpl5), mRNA
+GGCCGACTCTGCAGGTCTGCGTGGAGCCGCGGTTGCGGGTCTCTATTCCGCAGGATGGGGTTTGTGAAAGTTGTCAAGAATAAGGCCTACTTTAAAAGATACCAAGTGAGATTTCGAAGGCGGCGAGAGGGTAAAACTGACTACTATGCTCGAAAACGATTGGTGATCCAGGACAAGAATAAGTACAACACACCCAAATATAGGATGATAGTTCGTGTAACTAACAGAGATATCATCTGCCAGATTGCATATGCCCGTATAGAAGGGGATATGATCGTCTGTGCAGCATATGCACATGAACTTCCAAAATATGGTGTGAAAGTTGGCCTGACAAATTATGCTGCAGCCTATTGCACTGGCCTGCTGCTGGCCCGCAGGCTTCTGAATAGGTTTGGCATGGACAAGATCTATGAAGGCCAAGTGGAGGTGAATGGAGGTGAATACAATGTGGAAAGCATTGACGGTCAGCCTGGTGCCTTCACTTGCTATCTG [...]
diff --git a/debian/sim4-examples/sample.gen.fasta b/debian/sim4-examples/sample.gen.fasta
new file mode 100644
index 0000000..711ca92
--- /dev/null
+++ b/debian/sim4-examples/sample.gen.fasta
@@ -0,0 +1,20 @@
+>NM_001010985.1, start=109636510, end=109651186
+GCACCCCAACACACACCTGAGACTCACCCTGGACAACTCCCTCCTCTTCATCTCCAGGGGCCAGTCTGTTTCGCAGCGCCATTGAGTCTTCATCACTCAGGTCTGCCCCCTTGACAGCCTGCTCCCTGGCCCCAGCACAGCCCTCCTCCTCCTGGACTATTACAGCGGCCTCCTTGCTAGTCTGCTGGACCTCAGTCCCTTCTTCCGGCGCAGCCTCCTCACTGTGCCAGATTAGCCTGCCAGATGGCACAGCCATGATCATTCCTCCCCTGCCAAAACACTTCAGATGGTTCCCCTCAACTTATAAGGTCCAGACTTCTCAGCTGGAGCCCCAGCTCATCAAAATGTGCCCCCAGTTCAGATTAGCGGCTCTCTGCTCCTTATTCTCACCGCCCCCTTGTTTCCTCCTGTTTCCTGGCACTGACCGTGTGTTGCACCTCTCCACGCTTGCTCACACTGTTCCCCCTGCCTGGATGCCTTTTCCTCCTGCCT [...]
+>NM_024066.1, start=44459330, end=44593526
+GGTATTTGAAGTGGGAGCTGTGTTGTGGGACTGAGCCCTTAACAGGTTTGGCCTGCATTAACTCCAGGTAGTTTGTATCAGAATTAAATGGAATTGTTGGACACCTAGTTGGTGTCCAGAGAGTTGGAGAACTGGTTGTTGGTGGTGTGTGAAAAATCCACACACTGGTGTTTGAAGTGTTGTGAGTAAAAACAGTTCAGAGAGCCCTTTGGGAAATTTTCCTATAGTGGGCCCTGGATCCCATAAAACTGCCATATAACTATTTATCCTTCTCATGGGAAGCATATGGGATTAACAGACTATGACAGTGGTCTTTTATTTTTTCATAATATTTTAACTTTTATCTGGTAAAACACGTCCAAGACCAAAGAAAGCAACTTTTTTCCCCCCTCAAAACAAGCCAGATGCTTTAATGGCCTGCCTCCGGGGCCCACAGGCTCATCACAAATCCTTAAATAAGGCCCAGAGCTTGCCAGCCTCTGGCTCCGCCCA [...]
+>NM_000696.3, start=163898073, end=163934524
+GCATGAGTAATTGACATGCATGGGCAATCATGAAAGAAGAGAGGAAGGTGATGTAACTGCATAGGCTGGGGTAGGTGTGGGTACAGGGCAGCAAACACCAACTATCATAGCATACAGGCAAAATAGAATGTCTAAAGATGACATATCAAGAAGTAGTATGCAGAAGACATATAGAAGTAAGGAGGAAACCACCAGAAAAATCAAATGTAGAAAGAGATAAAACGTAGTTGCTCCAGTATACCAGGAGTATGTAAGACTGAGGAGTGTTGCGTTTCTGTGCTACCTGATTTATTCACAACTGTGCCTGATCTATATTAACAAAAATTTTAGAAATATGAGAGGGATGGTTGTGATGCATCTGAGAAACTTACCCATTCAAAATAGTAAATATAAAGTATATTGTATTATTTAAAGGCGTTTGTCTTTTTAGAAAACTGAGCCATTTCTTGGGGATATAAGACAGCCAGAAATTTACTATACTGGTTCTCCTTC [...]
+>NM_000572.2, start=205007571, end=205012462
+AAGTGTGGCCTCTGACCTAGAGTTATGCAAGGCCTCTCTTCCTCCTGTGGCCAGTGTGAAATTTCTCATCTGTGCTCTCCTGCCTCTAGCAGGAAGGTTGGCCTACATTTGGGGCACATCTCTGTCACTGTCTCAGGCCAGGGGTTCAAATATAAGACCTGAATCATACTGCACCTCAGAACCCAAACCCTTTTACTTAATTTTTTTTAAAAAATTTCATTCAGATGGTAAAGGTTCAAACAATACATAGAGATATAAAACAGAAAGAAAAAAAAATACACGCCTCTCTCTAGTACCTATTCCCCAGTAGTCAACACTGCTACCTTTTTTTTGCAGGGGAGGTAAATTCCTCCAGAAAAAAACTTAAACATCTACAATTTCATATATCCTCTCCCCTCTTCCCTAAAAAACAAAACAATAACAACAAAACTATAGAAATGGGATTATGCTATATATTCTGTTCAGTACTTTTTTGTTTTTGAAAATTTAAAA [...]
+>NM_003094.2, start=202097363, end=202106901
+ATTCTTGTACATTAGCCTCCCGAGTAGCTGAGACTACAGTTGTGGGCTACCACGCCTGGCTAATTTTTTGTATTTTCAGTAGAGATGGGATTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCTTGACCTCAAATGACTTTTTTTATTATTAAACTTTTTCCTTTGTTGCATATATGTCTGAAAAGTATTCAGATAGCTTTGTCTTTTTCTTTTTTTTTTTTTTTAGACAGGTCTCACTGTCACCCAGGCTGGAGTGCAGTAGTGTGATCTTGGTTCACTGCAACCTCCACCTCCTGTGTTCAAGTGATTCTCACACCTCAGCCTCCTGAGTAGCTGGGACTATAGATGTGTGCCACCATGCTTGGCTAATTTTTATATTTTTTGATAGAGACGAGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTACTGACCTCAAGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACATGTATGAGTCA [...]
+>NM_002403.2, start=17173584, end=17179726
+CTAGGCCAGGGTTCCCCTCGTTCAAGGGCAGGGAGGCATCTAGACCAGGCCCACACACGGGGCAAAAGATGGGCCCTGGAGTCAGGTTGGCCTGGGCTTGGATTGAGGCTCTGCCACCTTGAGTGGCGTTGAGCAAATCACTATGCTCTTTAAGCCTGTTTTCTGTAGTGGGGATTGTAATGGGACGTGGAATTGTAGGAATCAAGGAGATAATAGAATAAAGTGCCTGGCACCAGGGGTATTTTGTTCCCATCTGTCCCAGGCCTGTTAGGGGTGTGGGACACGGAGAATGAGATCCCTAAAGATTCCTGCCCCTTGAGTTTCTGGGCATCTCCCATTGCCACGGGCCTTGGGGTTGAGGCGGTGGCTGGATGCTGGCTCGAGGCTGGTGTGGGCACCCGCGGTGTTCTGCAGCCCATCTGGGGCAGCCACAAGACCTGCCGCCACTGCCTATTGGAATGAGTTCCAGGCAGGGAAGGAAGGAGAAGCAGG [...]
+>NM_020699.1, start=152045729, end=152067454
+ACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATCAGCCAGGCATGGTGGCATGTGCCTGTAATCCCAACTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGACAGAGGTCGTAGTGAACTGAGATTGCACCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCTGCCTCAAAAAAAATAAAATAAATAATAATTCGATATCTCAGTTACAATAGCTGCATTTCACATGCATAATAGCAACCATCATTGCCGAAAGTTCTGTTGGATGGTGTTGGTCTGGAAGTATCTTTTTGTTTGTTTTTTTACCTTTTTGCTTTATCTTGGTTGATTTCTTCTGACAGTTGGGGGAATATAAGAAGAGGGAAACCAGATCCTTTTCCTTATTTAGTGTTACTATTTGTGATCACTTAGGGTCTGTTTGAGGAAAAACTTTCCACAAGAAGGTTTGGAGAGTCTAGGCTTTGGATAATGGTCC [...]
+>NM_014002.2, start=204710419, end=204736845
+GCTGAGTTATTTTGCTGTGAGACCTTAGGCCGCTCTTTTCCCCTCTCTGAACTCTGGTTTCCTCTTATAGAAGACCAGAGCACTCCACTAGATTCAAGGTGTCCTAGGATTCCAAAGGGGTTCCTCAGGAGTGGCCTGGTGGCAGGGGCAGAGCGATGACCAGCAACCAGGCTCTGGTCCCATCCTTCACTCAGAGCAGGACAGCCCTGGCCTCCTTGGTTTGGGTGTTATGCCTCTGAGTCAGATTCCCTTTGAGAAGAGGCTTCTGAGGCTAAACACAGATTGGAAAACATTGACCTAGAGGATTCTCAAGGTTGTTTCCAAACTAGATGTTCTACACTCTAAACCCAGAAAAATTGTTCCCTGTAAAGATAGCGATCTTTAAGGATTTCCTAGAGAAACAAAACAAAAAGCATCCTTTGGTGTTTCCCAGTGTCTCCTAGCAGGCAAAAAAATCTTCTTATTGTCTAGCCCAAAAATATTTTACTAAAA [...]
+>NM_198149.1, start=200124655, end=200128053
+AACCTATTAGAGGAAACTTTTTTTTTTTTTTTTGAGATGGAGCCTTGCTGTGTCACCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAACCTCCGCCTCCTGGATTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAAGCTGGTCTCGAACTCCTAACCTCAGGTGATCCACCTGCCTTGTCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACTGCGCCCAGCCTAGAGGAAACTTTTTGAGACAAGATTTTGCTGTGTCACCCAGGCTGGAGTGCAGTGGCTCAGTCTCAGCTCACTGCAACATCTGCCTCCCAGGCCCAAGTGATTCTCGTGCCTCAGCCTCCCAAGTAGCTGGGACTTCAGTCACGCACCACCACGCCCAGCTGATTTTTGTATTTTT [...]
+>NM_000969.3, start=93070182, end=93080069
+ATCATGAGGTCAAGAAATCAAGACCACCCTGGCCAACATGGTGAAGCCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCACACACCTATAGTCCCAGCTACTCAGTAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGAGGGTGCAGTGAGCCGAGATCGCGCCACTGCACTCTAGCCTGGCAACAGAGTGAGACTCCATCTTACAAAACAAACAAACAAAAAACACACACACACACAAATTAAGAATCTCCAGGCATGAAAAAAAACACCATTAAAAGACTGAAAAGGCAAAATACAGACTGAAAAAAATAAAAATGCAATACATATATATCCTAGAAAGGACTCATATCCAGAATAAAGCATTATAAATGAGAGAAAAATAAGCATATCAACGAAAACTGGGCAAAAAGACTTAACAGGCACTTCACAAGAGGAAATATAAATGGTCAACAAAAGATACTCAACCTCAGTACCA [...]
diff --git a/debian/sim4.examples b/debian/sim4.examples
new file mode 100644
index 0000000..544a84e
--- /dev/null
+++ b/debian/sim4.examples
@@ -0,0 +1 @@
+debian/sim4-examples/*
diff --git a/debian/tests/control b/debian/tests/control
new file mode 100644
index 0000000..d2aa55a
--- /dev/null
+++ b/debian/tests/control
@@ -0,0 +1,3 @@
+Tests: run-unit-test
+Depends: @
+Restrictions: allow-stderr
diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test
new file mode 100644
index 0000000..743588c
--- /dev/null
+++ b/debian/tests/run-unit-test
@@ -0,0 +1,28 @@
+#!/bin/bash
+set -e
+
+pkg="sim4"
+
+if [ "$AUTOPKGTEST_TMP" = "" ] ; then
+ AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
+fi
+
+cp -a /usr/share/doc/${pkg}/examples/* $AUTOPKGTEST_TMP
+
+cd $AUTOPKGTEST_TMP
+
+gunzip *.gz
+
+echo "TEST START"
+
+/usr/bin/sim4 sample.cdna.fasta sample.gen.fasta
+
+/usr/bin/sim4 sample.cdna.fasta sample.gen.fasta A=1 P=1
+
+/usr/bin/sim4 sample.cdna.fasta sample.gen.fasta R=1
+
+/usr/bin/sim4 sample.cdna.fasta sample.cdna.fasta A=5 S=123..1020
+
+/usr/bin/sim4 sample.cdna.fasta sample.gen.fasta K=15 C=11 A=3 W=10
+
+echo "PASS"
--
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