[med-svn] r22940 - trunk/packages/R/r-bioc-genomicfeatures/trunk/debian

[Andreas Tille]

Author: tille
Date: 2016-10-27 12:38:08 +0000 (Thu, 27 Oct 2016)
New Revision: 22940

Modified:
   trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/changelog
   trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/control
   trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/copyright
   trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/rules
Log:
  * New upstream version
  * Convert to dh-r
  * Generic BioConductor homepage



Modified: trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/changelog	2016-10-27 12:28:38 UTC (rev 22939)
+++ trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/changelog	2016-10-27 12:38:08 UTC (rev 22940)
@@ -1,3 +1,11 @@
+r-bioc-genomicfeatures (1.26.0-1) unstable; urgency=medium
+
+  * New upstream version
+  * Convert to dh-r
+  * Generic BioConductor homepage
+
+ -- Andreas Tille <tille at debian.org>  Thu, 27 Oct 2016 13:36:37 +0200
+
 r-bioc-genomicfeatures (1.24.1-1) unstable; urgency=medium
 
   * New upstream version

Modified: trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/control	2016-10-27 12:28:38 UTC (rev 22939)
+++ trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/control	2016-10-27 12:38:08 UTC (rev 22940)
@@ -5,7 +5,7 @@
 Testsuite: autopkgtest
 Priority: optional
 Build-Depends: debhelper (>= 9),
-               cdbs,
+               dh-r,
                r-base-dev,
                r-cran-dbi,
                r-cran-rsqlite,
@@ -14,15 +14,14 @@
 Standards-Version: 3.9.8
 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-genomicfeatures/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicfeatures/trunk/
-Homepage: http://www.bioconductor.org/packages/release/bioc/html/GenomicFeatures.html
+Homepage: https://bioconductor.org/packages/GenomicFeatures/
 
 Package: r-bioc-genomicfeatures
 Architecture: all
 Depends: ${R:Depends},
          ${misc:Depends},
-         r-cran-rsqlite,
-         r-bioc-biomart (>= 2.24.0),
-         r-bioc-rtracklayer (>= 1.30.0)
+Recommends: ${R:Recommends}
+Suggests: ${R:Suggests}
 Description: GNU R tools for making and manipulating transcript centric annotations
  A set of tools and methods for making and manipulating transcript
  centric annotations. With these tools the user can easily download the

Modified: trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/copyright	2016-10-27 12:28:38 UTC (rev 22939)
+++ trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/copyright	2016-10-27 12:38:08 UTC (rev 22940)
@@ -1,14 +1,14 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: GenomicFeatures
 Upstream-Contact: Bioconductor Package Maintainer <maintainer at bioconductor.org> 
-Source: http://www.bioconductor.org/packages/release/bioc/html/GenomicFeatures.html
+Source: https://bioconductor.org/packages/GenomicFeatures/
 
 Files: *
-Copyright: © 2006-2014 M. Carlson, H. Pages, P. Aboyoun, S. Falcon, M. Morgan, D. Sarkar, M. Lawrence
+Copyright: © 2006-2016 M. Carlson, H. Pages, P. Aboyoun, S. Falcon, M. Morgan, D. Sarkar, M. Lawrence
 License: Artistic-2.0
 
 Files: debian/*
-Copyright: 2014 Andreas Tille <tille at debian.org>
+Copyright: 2014-2016 Andreas Tille <tille at debian.org>
 License: Artistic-2.0
 
 License: Artistic-2.0

Modified: trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/rules	2016-10-27 12:28:38 UTC (rev 22939)
+++ trunk/packages/R/r-bioc-genomicfeatures/trunk/debian/rules	2016-10-27 12:38:08 UTC (rev 22940)
@@ -1,4 +1,4 @@
 #!/usr/bin/make -f
 
-debRreposname=bioc
-include /usr/share/R/debian/r-cran.mk
+%:
+	dh $@ --buildsystem R