[med-svn] r22947 - trunk/packages/R/r-bioc-biovizbase/trunk/debian

[Andreas Tille]

Author: tille
Date: 2016-10-27 13:42:23 +0000 (Thu, 27 Oct 2016)
New Revision: 22947

Modified:
   trunk/packages/R/r-bioc-biovizbase/trunk/debian/changelog
   trunk/packages/R/r-bioc-biovizbase/trunk/debian/control
   trunk/packages/R/r-bioc-biovizbase/trunk/debian/copyright
   trunk/packages/R/r-bioc-biovizbase/trunk/debian/rules
Log:
  * New upstream version
  * Convert to dh-r
  * Generic BioConductor homepage



Modified: trunk/packages/R/r-bioc-biovizbase/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-biovizbase/trunk/debian/changelog	2016-10-27 13:33:24 UTC (rev 22946)
+++ trunk/packages/R/r-bioc-biovizbase/trunk/debian/changelog	2016-10-27 13:42:23 UTC (rev 22947)
@@ -1,3 +1,11 @@
+r-bioc-biovizbase (1.22.0-1) unstable; urgency=medium
+
+  * New upstream version
+  * Convert to dh-r
+  * Generic BioConductor homepage
+
+ -- Andreas Tille <tille at debian.org>  Thu, 27 Oct 2016 15:36:22 +0200
+
 r-bioc-biovizbase (1.20.0-1) unstable; urgency=medium
 
   * New upstream version

Modified: trunk/packages/R/r-bioc-biovizbase/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-biovizbase/trunk/debian/control	2016-10-27 13:33:24 UTC (rev 22946)
+++ trunk/packages/R/r-bioc-biovizbase/trunk/debian/control	2016-10-27 13:42:23 UTC (rev 22947)
@@ -4,7 +4,7 @@
 Section: gnu-r
 Priority: optional
 Build-Depends: debhelper (>= 9),
-               cdbs,
+               dh-r,
                r-base-dev,
                r-cran-dichromat,
                r-cran-foreign,
@@ -17,21 +17,15 @@
 Standards-Version: 3.9.8
 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-biovizbase/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-biovizbase/trunk/
-Homepage: http://bioconductor.org/packages/release/bioc/html/biovizBase.html
+Homepage: https://bioconductor.org/packages/biovizBase/
 
 Package: r-bioc-biovizbase
 Architecture: any
 Depends: ${R:Depends},
          ${misc:Depends},
          ${shlibs:Depends},
-         r-cran-dichromat,
-         r-cran-foreign,
-         r-cran-hmisc,
-         r-cran-nnet,
-         r-cran-rcolorbrewer,
-         r-cran-scales,
-         r-bioc-ensembldb,
-         r-bioc-variantannotation (>= 1.16.0)
+Recommends: ${R:Recommends}
+Suggests: ${R:Suggests}
 Description: GNU R basic graphic utilities for visualization of genomic data
  The biovizBase package is designed to provide a set of utilities, color
  schemes and conventions for genomic data. It serves as the base for

Modified: trunk/packages/R/r-bioc-biovizbase/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-biovizbase/trunk/debian/copyright	2016-10-27 13:33:24 UTC (rev 22946)
+++ trunk/packages/R/r-bioc-biovizbase/trunk/debian/copyright	2016-10-27 13:42:23 UTC (rev 22947)
@@ -1,14 +1,14 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: biovizBase
 Upstream-Contact: Tengfei Yin <yintengfei at gmail.com>
-Source: http://bioconductor.org/packages/release/bioc/html/biovizBase.html
+Source: https://bioconductor.org/packages/biovizBase/
 
 Files: *
-Copyright: © 2006-2013 Tengfei Yin, Michael Lawrence, Dianne Cook
+Copyright: © 2006-2016 Tengfei Yin, Michael Lawrence, Dianne Cook
 License: Artistic-2.0
 
 Files: debian/*
-Copyright: 2013 Andreas Tille <tille at debian.org>
+Copyright: 2013-2016 Andreas Tille <tille at debian.org>
 License: Artistic-2.0
 
 License: Artistic-2.0

Modified: trunk/packages/R/r-bioc-biovizbase/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-bioc-biovizbase/trunk/debian/rules	2016-10-27 13:33:24 UTC (rev 22946)
+++ trunk/packages/R/r-bioc-biovizbase/trunk/debian/rules	2016-10-27 13:42:23 UTC (rev 22947)
@@ -1,7 +1,4 @@
 #!/usr/bin/make -f
 
-debRreposname=bioc
-include /usr/share/R/debian/r-cran.mk
-
-clean::
-	rm -f src/*.so
+%:
+	dh $@ --buildsystem R