[med-svn] [examl] 01/01: doc-base

[Andreas Tille]

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commit 993e2dcf5904efe0905f9e8aa3166a8808fae2a4
Author: Andreas Tille <tille at debian.org>
Date:   Wed Feb 15 20:08:57 2017 +0100

    doc-base
---
 debian/control  | 23 ++++++++++++++++-------
 debian/doc-base | 23 +++++++++++++++++++++++
 2 files changed, 39 insertions(+), 7 deletions(-)

diff --git a/debian/control b/debian/control
index cfc33df..c601c22 100644
--- a/debian/control
+++ b/debian/control
@@ -15,12 +15,21 @@ Architecture: any
 Depends: ${shlibs:Depends},
          ${misc:Depends}
 Description: Exascale Maximum Likelihood (ExaML) code for phylogenetic inference
- Exascale Maximum Likelihood (ExaML) is a program for inferring phylogenies on
- whole-transcriptome and whole-genome alignments using MPI.
- .
- This code implements the popular RAxML search algorithm for maximum
+ Exascale Maximum Likelihood (ExaML) is a code for phylogenetic inference using
+ MPI. This code implements the popular RAxML search algorithm for maximum
  likelihood based inference of phylogenetic trees.
  .
- It uses a radically new MPI parallelization approach that yields
- improved parallel efficiency, in particular on partitioned multi-gene or
- whole-genome datasets.
+ ExaML is a strapped-down light-weight version of RAxML for phylogenetic
+ inference on huge datasets. It can only execute some very basic functions and is
+ intended for computer-savvy users that can write little perl-scripts and have
+ experience using queue submission scripts for clusters. ExaML only implements
+ the CAT and GAMMA models of rate heterogeneity for binary, DNA, and protein
+ data.
+ .
+ ExaML uses a radically new MPI parallelization approach that yields improved
+ parallel efficiency, in particular on partitioned multi-gene or whole-genome
+ datasets. It also implements a new load balancing algorithm that yields better
+ parallel efficiency.
+ .
+ It is up to 4 times faster than its predecessor RAxML-Light and scales to a
+ larger number of processors.
diff --git a/debian/doc-base b/debian/doc-base
new file mode 100644
index 0000000..3b2d93d
--- /dev/null
+++ b/debian/doc-base
@@ -0,0 +1,23 @@
+Document: examl
+Title: The ExaML v3.0.X Manual
+Author: Alexandros Stamatakis
+Abstract: <if you have no better clue the short and
+ Exascale Maximum Likelihood (ExaML) is a code for phylogenetic inference using
+ MPI. This code implements the popular RAxML search algorithm for maximum
+ likelihood based inference of phylogenetic trees.
+ ExaML is a strapped-down light-weight version of RAxML for phylogenetic
+ inference on huge datasets. It can only execute some very basic functions and is
+ intended for computer-savvy users that can write little perl-scripts and have
+ experience using queue submission scripts for clusters. ExaML only implements
+ the CAT and GAMMA models of rate heterogeneity for binary, DNA, and protein
+ data.
+ ExaML uses a radically new MPI parallelization approach that yields improved
+ parallel efficiency, in particular on partitioned multi-gene or whole-genome
+ datasets. It also implements a new load balancing algorithm that yields better
+ parallel efficiency.
+ It is up to 4 times faster than its predecessor RAxML-Light [1] and scales to a
+ larger number of processors.
+Section: Science/Biology
+
+Format: pdf
+Files: /usr/share/doc/examl/ExaML.pdf.gz

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